RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 AEBP2Q6ZN18 517 aaPredicted RBP36.16■■■■□ 3.38
IRF3-220ENST00000598108 GPATCH8Q9UKJ3 1502 aaKnown RBP36.11■■■■□ 3.37
IRF3-220ENST00000598108 POGZQ7Z3K3 1410 aa36.08■■■■□ 3.37
IRF3-220ENST00000598108 RICTORQ6R327 1708 aa36.07■■■■□ 3.36
IRF3-220ENST00000598108 CDC42BPBQ9Y5S2 1711 aa36.07■■■■□ 3.36
IRF3-220ENST00000598108 CCNB3Q8WWL7 1395 aa36.06■■■■□ 3.36
IRF3-220ENST00000598108 EHBP1L1Q8N3D4 1523 aa36.06■■■■□ 3.36
IRF3-220ENST00000598108 PREX2Q70Z35 1606 aa36.05■■■■□ 3.36
IRF3-220ENST00000598108 AFAP1Q8N556 730 aa36.05■■■■□ 3.36
IRF3-220ENST00000598108 TIAM1Q13009 1591 aa36.04■■■■□ 3.36
IRF3-220ENST00000598108 ZNF777Q9ULD5 760 aaPredicted RBP36.04■■■■□ 3.36
IRF3-220ENST00000598108 KANK4Q5T7N3 995 aaPredicted RBP36.02■■■■□ 3.36
IRF3-220ENST00000598108 CFDP1Q9UEE9 299 aaPredicted RBP36.02■■■■□ 3.36
IRF3-220ENST00000598108 CDC42BPAQ5VT25 1732 aa36.01■■■■□ 3.36
IRF3-220ENST00000598108 ARHGEF12Q9NZN5 1544 aa35.99■■■■□ 3.35
IRF3-220ENST00000598108 YEATS2Q9ULM3 1422 aa35.99■■■■□ 3.35
IRF3-220ENST00000598108 ZMYM4Q5VZL5 1548 aa35.98■■■■□ 3.35
IRF3-220ENST00000598108 LRRC9Q6ZRR7 1453 aa35.97■■■■□ 3.35
IRF3-220ENST00000598108 TRAPPC8Q9Y2L5 1435 aa35.95■■■■□ 3.35
IRF3-220ENST00000598108 MAP3K1Q13233 1512 aa35.94■■■■□ 3.34
IRF3-220ENST00000598108 MAGI2Q86UL8 1455 aa35.94■■■■□ 3.34
IRF3-220ENST00000598108 ABCC1P33527 1531 aa35.93■■■■□ 3.34
IRF3-220ENST00000598108 NCOA2Q15596 1464 aa35.93■■■■□ 3.34
IRF3-220ENST00000598108 ZNF518AQ6AHZ1 1483 aa35.93■■■■□ 3.34
IRF3-220ENST00000598108 ZNF644Q9H582 1327 aaPredicted RBP35.91■■■■□ 3.34
IRF3-220ENST00000598108 HNRNPMP52272 730 aaKnown RBP eCLIP35.91■■■■□ 3.34
IRF3-220ENST00000598108 ZFYVE16Q7Z3T8 1539 aa35.9■■■■□ 3.34
IRF3-220ENST00000598108 ARHGEF40Q8TER5 1519 aa35.9■■■■□ 3.34
IRF3-220ENST00000598108 SAMD9LQ8IVG5 1584 aa35.89■■■■□ 3.34
IRF3-220ENST00000598108 ARID4BQ4LE39 1312 aaPredicted RBP35.87■■■■□ 3.33
IRF3-220ENST00000598108 APLP2Q06481 763 aa35.87■■■■□ 3.33
IRF3-220ENST00000598108 KDM5CP41229 1560 aa35.85■■■■□ 3.33
IRF3-220ENST00000598108 MYT1LQ9UL68 1186 aa35.84■■■■□ 3.33
IRF3-220ENST00000598108 KIAA1107Q9UPP5 1409 aa35.83■■■■□ 3.33
IRF3-220ENST00000598108 SUPT6HQ7KZ85 1726 aaKnown RBP35.82■■■■□ 3.32
IRF3-220ENST00000598108 SYCP2Q9BX26 1530 aa35.81■■■■□ 3.32
IRF3-220ENST00000598108 ATP10AO60312 1499 aa35.8■■■■□ 3.32
IRF3-220ENST00000598108 ITSN2Q9NZM3 1697 aa35.79■■■■□ 3.32
IRF3-220ENST00000598108 PLEKHH2Q8IVE3 1493 aa35.79■■■■□ 3.32
IRF3-220ENST00000598108 MLH3Q9UHC1 1453 aa35.79■■■■□ 3.32
IRF3-220ENST00000598108 SPAG9O60271 1321 aaKnown RBP35.72■■■■□ 3.31
IRF3-220ENST00000598108 C9orf84Q5VXU9 1444 aa35.72■■■■□ 3.31
IRF3-220ENST00000598108 MBD5Q9P267 1494 aa35.72■■■■□ 3.31
IRF3-220ENST00000598108 HECW2Q9P2P5 1572 aa35.72■■■■□ 3.31
IRF3-220ENST00000598108 SIGLEC1Q9BZZ2 1709 aa35.7■■■■□ 3.31
IRF3-220ENST00000598108 MLECQ14165 292 aa35.67■■■■□ 3.3
IRF3-220ENST00000598108 DIP2CQ9Y2E4 1556 aa35.65■■■■□ 3.3
IRF3-220ENST00000598108 ADAMTSL3P82987 1691 aa35.65■■■■□ 3.3
IRF3-220ENST00000598108 BCORL1Q5H9F3 1711 aa35.64■■■■□ 3.3
IRF3-220ENST00000598108 CAMSAP2Q08AD1 1489 aa35.64■■■■□ 3.3
IRF3-220ENST00000598108 ABCA6Q8N139 1617 aa35.62■■■■□ 3.29
IRF3-220ENST00000598108 MYOM3Q5VTT5 1437 aa35.62■■■■□ 3.29
IRF3-220ENST00000598108 KIDINS220Q9ULH0 1771 aa35.61■■■■□ 3.29
IRF3-220ENST00000598108 MIA2Q96PC5 1412 aa35.57■■■■□ 3.28
IRF3-220ENST00000598108 RSPH4AQ5TD94 716 aa35.56■■■■□ 3.28
IRF3-220ENST00000598108 PTPRMP28827 1452 aa35.54■■■■□ 3.28
IRF3-220ENST00000598108 ATP7AQ04656 1500 aa35.54■■■■□ 3.28
IRF3-220ENST00000598108 REREQ9P2R6 1566 aa35.53■■■■□ 3.28
IRF3-220ENST00000598108 MADDQ8WXG6 1647 aa35.53■■■■□ 3.28
IRF3-220ENST00000598108 CCDC141Q6ZP82 1450 aa35.51■■■■□ 3.28
IRF3-220ENST00000598108 INO80Q9ULG1 1556 aaPredicted RBP35.5■■■■□ 3.27
IRF3-220ENST00000598108 RTEL1-TNFRSF6BF6WH68 1400 aa35.49■■■■□ 3.27
IRF3-220ENST00000598108 AGLP35573 1532 aa35.47■■■■□ 3.27
IRF3-220ENST00000598108 TSPY4P0CV99 314 aa35.45■■■■□ 3.27
IRF3-220ENST00000598108 TSPY10P0CW01 314 aa35.45■■■■□ 3.27
IRF3-220ENST00000598108 ARHGEF5Q12774 1597 aa35.43■■■■□ 3.26
IRF3-220ENST00000598108 A2MP01023 1474 aa35.43■■■■□ 3.26
IRF3-220ENST00000598108 FGD6Q6ZV73 1430 aa35.41■■■■□ 3.26
IRF3-220ENST00000598108 PLPPR3Q6T4P5 718 aa35.41■■■■□ 3.26
IRF3-220ENST00000598108 PPARGC1BQ86YN6 1023 aaKnown RBP35.4■■■■□ 3.26
IRF3-220ENST00000598108 RIMS1Q86UR5 1692 aaKnown RBP35.39■■■■□ 3.26
IRF3-220ENST00000598108 DHX29Q7Z478 1369 aaKnown RBP35.35■■■■□ 3.25
IRF3-220ENST00000598108 PLXNC1O60486 1568 aa35.34■■■■□ 3.25
IRF3-220ENST00000598108 PTPN23Q9H3S7 1636 aa35.33■■■■□ 3.25
IRF3-220ENST00000598108 CEBPAP49715 358 aaPredicted RBP35.33■■■■□ 3.25
IRF3-220ENST00000598108 TCOF1Q13428 1488 aaKnown RBP35.32■■■■□ 3.24
IRF3-220ENST00000598108 ABCC5O15440 1437 aa35.31■■■■□ 3.24
IRF3-220ENST00000598108 FER1L4A9Z1Z3 1794 aa35.28■■■■□ 3.24
IRF3-220ENST00000598108 GGT6Q6P531 493 aa35.28■■■■□ 3.24
IRF3-220ENST00000598108 ESF1Q9H501 851 aaKnown RBP35.26■■■■□ 3.24
IRF3-220ENST00000598108 ADGBQ8N7X0 1667 aa35.25■■■■□ 3.23
IRF3-220ENST00000598108 KIF3BO15066 747 aa35.24■■■■□ 3.23
IRF3-220ENST00000598108 FAM50AQ14320 339 aaKnown RBP35.24■■■■□ 3.23
IRF3-220ENST00000598108 MAST1Q9Y2H9 1570 aa35.23■■■■□ 3.23
IRF3-220ENST00000598108 DAPK1P53355 1430 aa35.22■■■■□ 3.23
IRF3-220ENST00000598108 CHIC2Q9UKJ5 165 aa35.17■■■■□ 3.22
IRF3-220ENST00000598108 CNTLNQ9NXG0 1405 aa35.16■■■■□ 3.22
IRF3-220ENST00000598108 RRP7BPQ9NSQ0 103 aa35.16■■■■□ 3.22
IRF3-220ENST00000598108 PPP6R1Q9UPN7 881 aa35.16■■■■□ 3.22
IRF3-220ENST00000598108 SHANK2Q9UPX8 1470 aa35.15■■■■□ 3.22
IRF3-220ENST00000598108 DNMT1P26358 1616 aaKnown RBP35.13■■■■□ 3.21
IRF3-220ENST00000598108 ZMYM3Q14202 1370 aa35.13■■■■□ 3.21
IRF3-220ENST00000598108 KIF15Q9NS87 1388 aa35.1■■■■□ 3.21
IRF3-220ENST00000598108 LMTK3Q96Q04 1460 aa35.09■■■■□ 3.21
IRF3-220ENST00000598108 CROCC2H7BZ55 1655 aa35.05■■■■□ 3.2
IRF3-220ENST00000598108 ANKRD30AQ9BXX3 1397 aa35.03■■■■□ 3.2
IRF3-220ENST00000598108 C3P01024 1663 aa35.03■■■■□ 3.2
IRF3-220ENST00000598108 HSPA2P54652 639 aa35.03■■■■□ 3.2
IRF3-220ENST00000598108 DUOX2Q9NRD8 1548 aa35.02■■■■□ 3.2
IRF3-220ENST00000598108 NCOA1Q15788 1441 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms