RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 MYO5CQ9NQX4 1742 aa27.98■■■□□ 2.07
PNKP-210ENST00000597965 RIMS1Q86UR5 1692 aaKnown RBP27.97■■■□□ 2.07
PNKP-210ENST00000597965 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
PNKP-210ENST00000597965 CLIP1P30622 1438 aa27.95■■■□□ 2.07
PNKP-210ENST00000597965 KIF14Q15058 1648 aa27.94■■■□□ 2.06
PNKP-210ENST00000597965 YEATS2Q9ULM3 1422 aa27.93■■■□□ 2.06
PNKP-210ENST00000597965 LMTK3Q96Q04 1460 aa27.92■■■□□ 2.06
PNKP-210ENST00000597965 TROQ12816 1431 aaPredicted RBP27.91■■■□□ 2.06
PNKP-210ENST00000597965 ATP10AO60312 1499 aa27.89■■■□□ 2.05
PNKP-210ENST00000597965 FBXO41Q8TF61 875 aa27.88■■■□□ 2.05
PNKP-210ENST00000597965 ZNF518AQ6AHZ1 1483 aa27.88■■■□□ 2.05
PNKP-210ENST00000597965 C9orf84Q5VXU9 1444 aa27.85■■■□□ 2.05
PNKP-210ENST00000597965 ARHGAP5Q13017 1502 aa27.85■■■□□ 2.05
PNKP-210ENST00000597965 FER1L4A9Z1Z3 1794 aa27.84■■■□□ 2.05
PNKP-210ENST00000597965 MLECQ14165 292 aa27.83■■■□□ 2.05
PNKP-210ENST00000597965 CCDC18Q5T9S5 1454 aa27.82■■■□□ 2.04
PNKP-210ENST00000597965 SIGLEC1Q9BZZ2 1709 aa27.81■■■□□ 2.04
PNKP-210ENST00000597965 PLPPR3Q6T4P5 718 aa27.79■■■□□ 2.04
PNKP-210ENST00000597965 KDM5CP41229 1560 aa27.77■■■□□ 2.04
PNKP-210ENST00000597965 ARHGEF12Q9NZN5 1544 aa27.77■■■□□ 2.04
PNKP-210ENST00000597965 CASKIN1Q8WXD9 1431 aa27.77■■■□□ 2.04
PNKP-210ENST00000597965 MYT1LQ9UL68 1186 aa27.77■■■□□ 2.04
PNKP-210ENST00000597965 LRRIQ1Q96JM4 1722 aa27.75■■■□□ 2.03
PNKP-210ENST00000597965 AFAP1Q8N556 730 aa27.74■■■□□ 2.03
PNKP-210ENST00000597965 HSPA2P54652 639 aa27.72■■■□□ 2.03
PNKP-210ENST00000597965 CDC42BPBQ9Y5S2 1711 aa27.71■■■□□ 2.03
PNKP-210ENST00000597965 PREX2Q70Z35 1606 aa27.7■■■□□ 2.02
PNKP-210ENST00000597965 MLH3Q9UHC1 1453 aa27.7■■■□□ 2.02
PNKP-210ENST00000597965 REREQ9P2R6 1566 aa27.69■■■□□ 2.02
PNKP-210ENST00000597965 FYCO1Q9BQS8 1478 aa27.67■■■□□ 2.02
PNKP-210ENST00000597965 PREX1Q8TCU6 1659 aa27.66■■■□□ 2.02
PNKP-210ENST00000597965 DIP2CQ9Y2E4 1556 aa27.65■■■□□ 2.02
PNKP-210ENST00000597965 ABCC1P33527 1531 aa27.64■■■□□ 2.02
PNKP-210ENST00000597965 ESF1Q9H501 851 aaKnown RBP27.63■■■□□ 2.01
PNKP-210ENST00000597965 SETD1BQ9UPS6 1966 aaKnown RBP27.62■■■□□ 2.01
PNKP-210ENST00000597965 ITSN2Q9NZM3 1697 aa27.59■■■□□ 2.01
PNKP-210ENST00000597965 AGLP35573 1532 aa27.59■■■□□ 2.01
PNKP-210ENST00000597965 DMRT2Q9Y5R5 561 aa27.59■■■□□ 2.01
PNKP-210ENST00000597965 ABCA6Q8N139 1617 aa27.59■■■□□ 2.01
PNKP-210ENST00000597965 UHRF1BP1Q6BDS2 1440 aa27.58■■■□□ 2
PNKP-210ENST00000597965 TRAPPC8Q9Y2L5 1435 aa27.58■■■□□ 2
PNKP-210ENST00000597965 CEBPAP49715 358 aaPredicted RBP27.57■■■□□ 2
PNKP-210ENST00000597965 CDC42BPAQ5VT25 1732 aa27.57■■■□□ 2
PNKP-210ENST00000597965 CERKQ8TCT0 537 aa27.52■■■□□ 2
PNKP-210ENST00000597965 CNTLNQ9NXG0 1405 aa27.51■■□□□ 1.99
PNKP-210ENST00000597965 KIDINS220Q9ULH0 1771 aa27.5■■□□□ 1.99
PNKP-210ENST00000597965 ZNF777Q9ULD5 760 aaPredicted RBP27.5■■□□□ 1.99
PNKP-210ENST00000597965 PLEKHH2Q8IVE3 1493 aa27.48■■□□□ 1.99
PNKP-210ENST00000597965 GPATCH8Q9UKJ3 1502 aaKnown RBP27.47■■□□□ 1.99
PNKP-210ENST00000597965 C3P01024 1663 aa27.47■■□□□ 1.99
PNKP-210ENST00000597965 SAMD9LQ8IVG5 1584 aa27.47■■□□□ 1.99
PNKP-210ENST00000597965 SPAG9O60271 1321 aaKnown RBP27.45■■□□□ 1.99
PNKP-210ENST00000597965 KIAA1107Q9UPP5 1409 aa27.45■■□□□ 1.98
PNKP-210ENST00000597965 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
PNKP-210ENST00000597965 SYCP2Q9BX26 1530 aa27.44■■□□□ 1.98
PNKP-210ENST00000597965 CCNB3Q8WWL7 1395 aa27.44■■□□□ 1.98
PNKP-210ENST00000597965 MTUS2Q5JR59 1369 aa27.43■■□□□ 1.98
PNKP-210ENST00000597965 STRCQ7RTU9 1775 aa27.4■■□□□ 1.98
PNKP-210ENST00000597965 HNRNPMP52272 730 aaKnown RBP eCLIP27.4■■□□□ 1.98
PNKP-210ENST00000597965 MROH2AA6NES4 1674 aa27.38■■□□□ 1.97
PNKP-210ENST00000597965 ATP7AQ04656 1500 aa27.37■■□□□ 1.97
PNKP-210ENST00000597965 NPATQ14207 1427 aa27.37■■□□□ 1.97
PNKP-210ENST00000597965 PTPRTO14522 1441 aa27.36■■□□□ 1.97
PNKP-210ENST00000597965 SUPT6HQ7KZ85 1726 aaKnown RBP27.33■■□□□ 1.96
PNKP-210ENST00000597965 INO80Q9ULG1 1556 aaPredicted RBP27.32■■□□□ 1.96
PNKP-210ENST00000597965 ZMYM3Q14202 1370 aa27.32■■□□□ 1.96
PNKP-210ENST00000597965 A2MP01023 1474 aa27.32■■□□□ 1.96
PNKP-210ENST00000597965 PPP6R1Q9UPN7 881 aa27.3■■□□□ 1.96
PNKP-210ENST00000597965 EHBP1L1Q8N3D4 1523 aa27.3■■□□□ 1.96
PNKP-210ENST00000597965 PLXNC1O60486 1568 aa27.3■■□□□ 1.96
PNKP-210ENST00000597965 ADGBQ8N7X0 1667 aa27.26■■□□□ 1.95
PNKP-210ENST00000597965 NCOA1Q15788 1441 aa27.25■■□□□ 1.95
PNKP-210ENST00000597965 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
PNKP-210ENST00000597965 TIAM1Q13009 1591 aa27.23■■□□□ 1.95
PNKP-210ENST00000597965 RTEL1-TNFRSF6BF6WH68 1400 aa27.23■■□□□ 1.95
PNKP-210ENST00000597965 CLTCQ00610 1675 aaKnown RBP27.22■■□□□ 1.95
PNKP-210ENST00000597965 GGT6Q6P531 493 aa27.22■■□□□ 1.95
PNKP-210ENST00000597965 CAMSAP1Q5T5Y3 1602 aa27.19■■□□□ 1.94
PNKP-210ENST00000597965 RSPH4AQ5TD94 716 aa27.19■■□□□ 1.94
PNKP-210ENST00000597965 IQSEC2Q5JU85 1478 aa27.18■■□□□ 1.94
PNKP-210ENST00000597965 MBD5Q9P267 1494 aa27.18■■□□□ 1.94
PNKP-210ENST00000597965 ZNF644Q9H582 1327 aaPredicted RBP27.16■■□□□ 1.94
PNKP-210ENST00000597965 ZNF142P52746 1687 aaPredicted RBP27.15■■□□□ 1.94
PNKP-210ENST00000597965 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
PNKP-210ENST00000597965 PKD2Q13563 968 aa27.14■■□□□ 1.94
PNKP-210ENST00000597965 MYO3AQ8NEV4 1616 aa27.14■■□□□ 1.94
PNKP-210ENST00000597965 PLA2R1Q13018 1463 aa27.13■■□□□ 1.93
PNKP-210ENST00000597965 DHX29Q7Z478 1369 aaKnown RBP27.13■■□□□ 1.93
PNKP-210ENST00000597965 LTBP4Q8N2S1 1624 aa27.12■■□□□ 1.93
PNKP-210ENST00000597965 CEP170BQ9Y4F5 1589 aaPredicted RBP27.11■■□□□ 1.93
PNKP-210ENST00000597965 CCDC141Q6ZP82 1450 aa27.11■■□□□ 1.93
PNKP-210ENST00000597965 NCOA2Q15596 1464 aa27.09■■□□□ 1.93
PNKP-210ENST00000597965 FAM135AQ9P2D6 1515 aa27.09■■□□□ 1.93
PNKP-210ENST00000597965 NCKAP5LQ9HCH0 1330 aa27.06■■□□□ 1.92
PNKP-210ENST00000597965 CAMSAP2Q08AD1 1489 aa27.06■■□□□ 1.92
PNKP-210ENST00000597965 KIF3BO15066 747 aa27.04■■□□□ 1.92
PNKP-210ENST00000597965 TSPY4P0CV99 314 aa27.04■■□□□ 1.92
PNKP-210ENST00000597965 TSPY10P0CW01 314 aa27.04■■□□□ 1.92
PNKP-210ENST00000597965 TCOF1Q13428 1488 aaKnown RBP27.03■■□□□ 1.92
PNKP-210ENST00000597965 A2ML1A8K2U0 1454 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms