RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ARAP3Q8WWN8 1544 aa34.22■■■■□ 3.07
CHMP2A-204ENST00000597848 NEO1Q92859 1461 aa34.21■■■■□ 3.07
CHMP2A-204ENST00000597848 PREX2Q70Z35 1606 aa34.2■■■■□ 3.07
CHMP2A-204ENST00000597848 CDC42BPAQ5VT25 1732 aa34.2■■■■□ 3.07
CHMP2A-204ENST00000597848 PHLDB1Q86UU1 1377 aa34.2■■■■□ 3.07
CHMP2A-204ENST00000597848 AKNAQ7Z591 1439 aa34.19■■■■□ 3.06
CHMP2A-204ENST00000597848 CDC42BPBQ9Y5S2 1711 aa34.17■■■■□ 3.06
CHMP2A-204ENST00000597848 CFAP74Q9C0B2 1584 aa34.15■■■■□ 3.06
CHMP2A-204ENST00000597848 MYOM3Q5VTT5 1437 aa34.13■■■■□ 3.05
CHMP2A-204ENST00000597848 ITSN2Q9NZM3 1697 aa34.13■■■■□ 3.05
CHMP2A-204ENST00000597848 ADGRL1O94910 1474 aa34.09■■■■□ 3.05
CHMP2A-204ENST00000597848 ZNF644Q9H582 1327 aaPredicted RBP34.08■■■■□ 3.05
CHMP2A-204ENST00000597848 SCAPERQ9BY12 1400 aa34.08■■■■□ 3.05
CHMP2A-204ENST00000597848 KDM6BO15054 1643 aa34.07■■■■□ 3.04
CHMP2A-204ENST00000597848 COL17A1Q9UMD9 1497 aaPredicted RBP34.07■■■■□ 3.04
CHMP2A-204ENST00000597848 MIA2Q96PC5 1412 aa34.04■■■■□ 3.04
CHMP2A-204ENST00000597848 RAPGEF3O95398 923 aa34.04■■■■□ 3.04
CHMP2A-204ENST00000597848 DENND4BO75064 1496 aaPredicted RBP34.02■■■■□ 3.04
CHMP2A-204ENST00000597848 SAMD9LQ8IVG5 1584 aa34.02■■■■□ 3.04
CHMP2A-204ENST00000597848 HNRNPMP52272 730 aaKnown RBP eCLIP34.01■■■■□ 3.03
CHMP2A-204ENST00000597848 PLEKHH2Q8IVE3 1493 aa34■■■■□ 3.03
CHMP2A-204ENST00000597848 FGD6Q6ZV73 1430 aa33.99■■■■□ 3.03
CHMP2A-204ENST00000597848 ABCC1P33527 1531 aa33.97■■■■□ 3.03
CHMP2A-204ENST00000597848 CAMSAP2Q08AD1 1489 aa33.96■■■■□ 3.03
CHMP2A-204ENST00000597848 KIAA1107Q9UPP5 1409 aa33.96■■■■□ 3.03
CHMP2A-204ENST00000597848 ARHGEF12Q9NZN5 1544 aa33.95■■■■□ 3.03
CHMP2A-204ENST00000597848 AFAP1Q8N556 730 aa33.94■■■■□ 3.02
CHMP2A-204ENST00000597848 SYCP2Q9BX26 1530 aa33.93■■■■□ 3.02
CHMP2A-204ENST00000597848 FAM50AQ14320 339 aaKnown RBP33.92■■■■□ 3.02
CHMP2A-204ENST00000597848 POGZQ7Z3K3 1410 aa33.92■■■■□ 3.02
CHMP2A-204ENST00000597848 TRAPPC8Q9Y2L5 1435 aa33.91■■■■□ 3.02
CHMP2A-204ENST00000597848 PTPN23Q9H3S7 1636 aa33.9■■■■□ 3.02
CHMP2A-204ENST00000597848 MYT1LQ9UL68 1186 aa33.88■■■■□ 3.01
CHMP2A-204ENST00000597848 ZNF518AQ6AHZ1 1483 aa33.87■■■■□ 3.01
CHMP2A-204ENST00000597848 MBD5Q9P267 1494 aa33.85■■■■□ 3.01
CHMP2A-204ENST00000597848 RSPH4AQ5TD94 716 aa33.85■■■■□ 3.01
CHMP2A-204ENST00000597848 TCOF1Q13428 1488 aaKnown RBP33.84■■■■□ 3.01
CHMP2A-204ENST00000597848 FRMPD1Q5SYB0 1578 aa33.84■■■■□ 3.01
CHMP2A-204ENST00000597848 RICTORQ6R327 1708 aa33.83■■■■□ 3.01
CHMP2A-204ENST00000597848 SPAG9O60271 1321 aaKnown RBP33.79■■■■□ 3
CHMP2A-204ENST00000597848 TSPY4P0CV99 314 aa33.78■■■■□ 3
CHMP2A-204ENST00000597848 TSPY10P0CW01 314 aa33.78■■■■□ 3
CHMP2A-204ENST00000597848 CCDC141Q6ZP82 1450 aa33.77■■■■□ 3
CHMP2A-204ENST00000597848 ARHGEF5Q12774 1597 aa33.75■■■□□ 2.99
CHMP2A-204ENST00000597848 KDM5CP41229 1560 aa33.74■■■□□ 2.99
CHMP2A-204ENST00000597848 RRBP1Q9P2E9 1410 aaKnown RBP33.74■■■□□ 2.99
CHMP2A-204ENST00000597848 ZMYM4Q5VZL5 1548 aa33.74■■■□□ 2.99
CHMP2A-204ENST00000597848 MAGI2Q86UL8 1455 aa33.71■■■□□ 2.99
CHMP2A-204ENST00000597848 ABCC5O15440 1437 aa33.7■■■□□ 2.98
CHMP2A-204ENST00000597848 MLH3Q9UHC1 1453 aa33.69■■■□□ 2.98
CHMP2A-204ENST00000597848 ITGAEP38570 1179 aa33.69■■■□□ 2.98
CHMP2A-204ENST00000597848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.68■■■□□ 2.98
CHMP2A-204ENST00000597848 DAPK1P53355 1430 aa33.68■■■□□ 2.98
CHMP2A-204ENST00000597848 YEATS2Q9ULM3 1422 aa33.68■■■□□ 2.98
CHMP2A-204ENST00000597848 ZFYVE16Q7Z3T8 1539 aa33.68■■■□□ 2.98
CHMP2A-204ENST00000597848 HECW2Q9P2P5 1572 aa33.67■■■□□ 2.98
CHMP2A-204ENST00000597848 CHIC2Q9UKJ5 165 aa33.64■■■□□ 2.98
CHMP2A-204ENST00000597848 DNMT1P26358 1616 aaKnown RBP33.64■■■□□ 2.98
CHMP2A-204ENST00000597848 ATP7AQ04656 1500 aa33.63■■■□□ 2.97
CHMP2A-204ENST00000597848 C9orf84Q5VXU9 1444 aa33.62■■■□□ 2.97
CHMP2A-204ENST00000597848 RTEL1-TNFRSF6BF6WH68 1400 aa33.62■■■□□ 2.97
CHMP2A-204ENST00000597848 KIDINS220Q9ULH0 1771 aa33.59■■■□□ 2.97
CHMP2A-204ENST00000597848 INO80Q9ULG1 1556 aaPredicted RBP33.58■■■□□ 2.97
CHMP2A-204ENST00000597848 ARHGEF40Q8TER5 1519 aa33.58■■■□□ 2.97
CHMP2A-204ENST00000597848 ATP10AO60312 1499 aa33.57■■■□□ 2.97
CHMP2A-204ENST00000597848 SHANK2Q9UPX8 1470 aa33.56■■■□□ 2.96
CHMP2A-204ENST00000597848 MAST1Q9Y2H9 1570 aa33.54■■■□□ 2.96
CHMP2A-204ENST00000597848 ARID4BQ4LE39 1312 aaPredicted RBP33.53■■■□□ 2.96
CHMP2A-204ENST00000597848 CROCC2H7BZ55 1655 aa33.52■■■□□ 2.96
CHMP2A-204ENST00000597848 DIP2CQ9Y2E4 1556 aa33.52■■■□□ 2.96
CHMP2A-204ENST00000597848 ABCA6Q8N139 1617 aa33.52■■■□□ 2.96
CHMP2A-204ENST00000597848 PTPRKQ15262 1439 aa33.52■■■□□ 2.96
CHMP2A-204ENST00000597848 RRP7BPQ9NSQ0 103 aa33.51■■■□□ 2.95
CHMP2A-204ENST00000597848 ANKRD30AQ9BXX3 1397 aa33.5■■■□□ 2.95
CHMP2A-204ENST00000597848 A2MP01023 1474 aa33.45■■■□□ 2.95
CHMP2A-204ENST00000597848 DHX29Q7Z478 1369 aaKnown RBP33.43■■■□□ 2.94
CHMP2A-204ENST00000597848 KIF15Q9NS87 1388 aa33.43■■■□□ 2.94
CHMP2A-204ENST00000597848 NCOA1Q15788 1441 aa33.43■■■□□ 2.94
CHMP2A-204ENST00000597848 ADGRL2O95490 1459 aa33.41■■■□□ 2.94
CHMP2A-204ENST00000597848 ADGBQ8N7X0 1667 aa33.4■■■□□ 2.94
CHMP2A-204ENST00000597848 PLXNC1O60486 1568 aa33.4■■■□□ 2.94
CHMP2A-204ENST00000597848 ROCK1Q13464 1354 aa33.38■■■□□ 2.93
CHMP2A-204ENST00000597848 MLECQ14165 292 aa33.37■■■□□ 2.93
CHMP2A-204ENST00000597848 REREQ9P2R6 1566 aa33.37■■■□□ 2.93
CHMP2A-204ENST00000597848 DUOX2Q9NRD8 1548 aa33.34■■■□□ 2.93
CHMP2A-204ENST00000597848 KIF3BO15066 747 aa33.33■■■□□ 2.93
CHMP2A-204ENST00000597848 SIGLEC1Q9BZZ2 1709 aa33.31■■■□□ 2.92
CHMP2A-204ENST00000597848 AGLP35573 1532 aa33.31■■■□□ 2.92
CHMP2A-204ENST00000597848 GGT6Q6P531 493 aa33.27■■■□□ 2.92
CHMP2A-204ENST00000597848 TRIM26Q12899 539 aaPredicted RBP33.25■■■□□ 2.91
CHMP2A-204ENST00000597848 ERBINQ96RT1 1412 aa33.25■■■□□ 2.91
CHMP2A-204ENST00000597848 ANKRD50Q9ULJ7 1429 aa33.25■■■□□ 2.91
CHMP2A-204ENST00000597848 ESF1Q9H501 851 aaKnown RBP33.18■■■□□ 2.9
CHMP2A-204ENST00000597848 BCORL1Q5H9F3 1711 aa33.18■■■□□ 2.9
CHMP2A-204ENST00000597848 NAIPQ13075 1403 aa33.18■■■□□ 2.9
CHMP2A-204ENST00000597848 HFM1A2PYH4 1435 aa33.17■■■□□ 2.9
CHMP2A-204ENST00000597848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.16■■■□□ 2.94e-8■■■■□ 22.4
CHMP2A-204ENST00000597848 EIF2AK4Q9P2K8 1649 aaKnown RBP33.16■■■□□ 2.9
CHMP2A-204ENST00000597848 KDM4FA0A1W2PPD8 638 aa33.14■■■□□ 2.9
CHMP2A-204ENST00000597848 PPP6R1Q9UPN7 881 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms