RNA–Protein interactions for RNA: ENST00000597057.1

EMP3-205, Transcript of epithelial membrane protein 3, humanhuman

TSL 2

Gene EMP3, Length 406 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-205ENST00000597057 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
EMP3-205ENST00000597057 PREX2Q70Z35 1606 aa18.55■□□□□ 0.56
EMP3-205ENST00000597057 CDC42BPAQ5VT25 1732 aa18.54■□□□□ 0.56
EMP3-205ENST00000597057 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
EMP3-205ENST00000597057 EFCAB2Q5VUJ9 269 aa18.54■□□□□ 0.56
EMP3-205ENST00000597057 PHLDB1Q86UU1 1377 aa18.54■□□□□ 0.56
EMP3-205ENST00000597057 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
EMP3-205ENST00000597057 AKNAQ7Z591 1439 aa18.52■□□□□ 0.56
EMP3-205ENST00000597057 CFAP74Q9C0B2 1584 aa18.51■□□□□ 0.55
EMP3-205ENST00000597057 KDM6BO15054 1643 aa18.51■□□□□ 0.55
EMP3-205ENST00000597057 CFDP1Q9UEE9 299 aaPredicted RBP18.49■□□□□ 0.55
EMP3-205ENST00000597057 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
EMP3-205ENST00000597057 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
EMP3-205ENST00000597057 ADGRL1O94910 1474 aa18.46■□□□□ 0.55
EMP3-205ENST00000597057 ZNF777Q9ULD5 760 aaPredicted RBP18.46■□□□□ 0.55
EMP3-205ENST00000597057 RAPGEF3O95398 923 aa18.45■□□□□ 0.54
EMP3-205ENST00000597057 MYOM3Q5VTT5 1437 aa18.45■□□□□ 0.54
EMP3-205ENST00000597057 SCAPERQ9BY12 1400 aa18.45■□□□□ 0.54
EMP3-205ENST00000597057 SAMD9LQ8IVG5 1584 aa18.45■□□□□ 0.54
EMP3-205ENST00000597057 ZNF644Q9H582 1327 aaPredicted RBP18.44■□□□□ 0.54
EMP3-205ENST00000597057 DENND4BO75064 1496 aaPredicted RBP18.43■□□□□ 0.54
EMP3-205ENST00000597057 ABCC1P33527 1531 aa18.43■□□□□ 0.54
EMP3-205ENST00000597057 ARHGEF12Q9NZN5 1544 aa18.43■□□□□ 0.54
EMP3-205ENST00000597057 FRMPD1Q5SYB0 1578 aa18.42■□□□□ 0.54
EMP3-205ENST00000597057 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
EMP3-205ENST00000597057 MIA2Q96PC5 1412 aa18.4■□□□□ 0.54
EMP3-205ENST00000597057 RICTORQ6R327 1708 aa18.39■□□□□ 0.53
EMP3-205ENST00000597057 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.53
EMP3-205ENST00000597057 HNRNPMP52272 730 aaKnown RBP eCLIP18.38■□□□□ 0.53
EMP3-205ENST00000597057 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
EMP3-205ENST00000597057 CAMSAP2Q08AD1 1489 aa18.38■□□□□ 0.53
EMP3-205ENST00000597057 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
EMP3-205ENST00000597057 SYCP2Q9BX26 1530 aa18.38■□□□□ 0.53
EMP3-205ENST00000597057 AFAP1Q8N556 730 aa18.37■□□□□ 0.53
EMP3-205ENST00000597057 FGD6Q6ZV73 1430 aa18.36■□□□□ 0.53
EMP3-205ENST00000597057 ZNF518AQ6AHZ1 1483 aa18.35■□□□□ 0.53
EMP3-205ENST00000597057 MBD5Q9P267 1494 aa18.35■□□□□ 0.53
EMP3-205ENST00000597057 KDM5CP41229 1560 aa18.34■□□□□ 0.53
EMP3-205ENST00000597057 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.53
EMP3-205ENST00000597057 PTPN23Q9H3S7 1636 aa18.32■□□□□ 0.52
EMP3-205ENST00000597057 HECW2Q9P2P5 1572 aa18.32■□□□□ 0.52
EMP3-205ENST00000597057 TCOF1Q13428 1488 aaKnown RBP18.31■□□□□ 0.52
EMP3-205ENST00000597057 MAGI2Q86UL8 1455 aa18.29■□□□□ 0.52
EMP3-205ENST00000597057 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
EMP3-205ENST00000597057 ARHGEF5Q12774 1597 aa18.28■□□□□ 0.52
EMP3-205ENST00000597057 CCDC141Q6ZP82 1450 aa18.27■□□□□ 0.52
EMP3-205ENST00000597057 MLH3Q9UHC1 1453 aa18.27■□□□□ 0.52
EMP3-205ENST00000597057 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
EMP3-205ENST00000597057 ZFYVE16Q7Z3T8 1539 aa18.26■□□□□ 0.51
EMP3-205ENST00000597057 SPAG9O60271 1321 aaKnown RBP18.25■□□□□ 0.51
EMP3-205ENST00000597057 ARHGEF40Q8TER5 1519 aa18.25■□□□□ 0.51
EMP3-205ENST00000597057 FAM50AQ14320 339 aaKnown RBP18.24■□□□□ 0.51
EMP3-205ENST00000597057 KIDINS220Q9ULH0 1771 aa18.23■□□□□ 0.51
EMP3-205ENST00000597057 INO80Q9ULG1 1556 aaPredicted RBP18.23■□□□□ 0.51
EMP3-205ENST00000597057 MYT1LQ9UL68 1186 aa18.23■□□□□ 0.51
EMP3-205ENST00000597057 ABCC5O15440 1437 aa18.23■□□□□ 0.51
EMP3-205ENST00000597057 ATP7AQ04656 1500 aa18.22■□□□□ 0.51
EMP3-205ENST00000597057 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
EMP3-205ENST00000597057 RTEL1-TNFRSF6BF6WH68 1400 aa18.21■□□□□ 0.51
EMP3-205ENST00000597057 DAPK1P53355 1430 aa18.21■□□□□ 0.51
EMP3-205ENST00000597057 DIP2CQ9Y2E4 1556 aa18.21■□□□□ 0.51
EMP3-205ENST00000597057 DNMT1P26358 1616 aaKnown RBP18.2■□□□□ 0.5
EMP3-205ENST00000597057 ABCA6Q8N139 1617 aa18.2■□□□□ 0.5
EMP3-205ENST00000597057 TSPY4P0CV99 314 aa18.2■□□□□ 0.5
EMP3-205ENST00000597057 TSPY10P0CW01 314 aa18.2■□□□□ 0.5
EMP3-205ENST00000597057 ATP10AO60312 1499 aa18.2■□□□□ 0.5
EMP3-205ENST00000597057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.19■□□□□ 0.5
EMP3-205ENST00000597057 MAST1Q9Y2H9 1570 aa18.18■□□□□ 0.5
EMP3-205ENST00000597057 C9orf84Q5VXU9 1444 aa18.18■□□□□ 0.5
EMP3-205ENST00000597057 SHANK2Q9UPX8 1470 aa18.17■□□□□ 0.5
EMP3-205ENST00000597057 CROCC2H7BZ55 1655 aa18.16■□□□□ 0.5
EMP3-205ENST00000597057 SIGLEC1Q9BZZ2 1709 aa18.16■□□□□ 0.5
EMP3-205ENST00000597057 FBXO41Q8TF61 875 aa18.15■□□□□ 0.5
EMP3-205ENST00000597057 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
EMP3-205ENST00000597057 REREQ9P2R6 1566 aa18.14■□□□□ 0.49
EMP3-205ENST00000597057 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
EMP3-205ENST00000597057 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
EMP3-205ENST00000597057 A2MP01023 1474 aa18.11■□□□□ 0.49
EMP3-205ENST00000597057 ADGBQ8N7X0 1667 aa18.1■□□□□ 0.49
EMP3-205ENST00000597057 PLXNC1O60486 1568 aa18.1■□□□□ 0.49
EMP3-205ENST00000597057 ITGAEP38570 1179 aa18.1■□□□□ 0.49
EMP3-205ENST00000597057 DHX29Q7Z478 1369 aaKnown RBP18.09■□□□□ 0.49
EMP3-205ENST00000597057 AGLP35573 1532 aa18.08■□□□□ 0.49
EMP3-205ENST00000597057 ADGRL2O95490 1459 aa18.08■□□□□ 0.49
EMP3-205ENST00000597057 NCOA1Q15788 1441 aa18.08■□□□□ 0.49
EMP3-205ENST00000597057 RRP7BPQ9NSQ0 103 aa18.08■□□□□ 0.48
EMP3-205ENST00000597057 ANKRD30AQ9BXX3 1397 aa18.07■□□□□ 0.48
EMP3-205ENST00000597057 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
EMP3-205ENST00000597057 BCORL1Q5H9F3 1711 aa18.04■□□□□ 0.48
EMP3-205ENST00000597057 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
EMP3-205ENST00000597057 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
EMP3-205ENST00000597057 MLECQ14165 292 aa18.03■□□□□ 0.48
EMP3-205ENST00000597057 ADAMTSL3P82987 1691 aa18.01■□□□□ 0.47
EMP3-205ENST00000597057 KIF3BO15066 747 aa18■□□□□ 0.47
EMP3-205ENST00000597057 ERBINQ96RT1 1412 aa17.99■□□□□ 0.47
EMP3-205ENST00000597057 EIF2AK4Q9P2K8 1649 aaKnown RBP17.98■□□□□ 0.47
EMP3-205ENST00000597057 GGT6Q6P531 493 aa17.97■□□□□ 0.47
EMP3-205ENST00000597057 MADDQ8WXG6 1647 aa17.96■□□□□ 0.47
EMP3-205ENST00000597057 ANKRD50Q9ULJ7 1429 aa17.96■□□□□ 0.47
EMP3-205ENST00000597057 RNF17Q9BXT8 1623 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms