RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 ZFYVE16Q7Z3T8 1539 aa22.7■■□□□ 1.22
C19orf54-206ENST00000596940 ADAMTSL3P82987 1691 aa22.69■■□□□ 1.22
C19orf54-206ENST00000596940 YEATS2Q9ULM3 1422 aa22.66■■□□□ 1.22
C19orf54-206ENST00000596940 ARHGAP5Q13017 1502 aa22.66■■□□□ 1.22
C19orf54-206ENST00000596940 FYCO1Q9BQS8 1478 aa22.65■■□□□ 1.22
C19orf54-206ENST00000596940 BCORL1Q5H9F3 1711 aa22.65■■□□□ 1.22
C19orf54-206ENST00000596940 MYT1LQ9UL68 1186 aa22.64■■□□□ 1.21
C19orf54-206ENST00000596940 ZNF518AQ6AHZ1 1483 aa22.64■■□□□ 1.21
C19orf54-206ENST00000596940 MYO5CQ9NQX4 1742 aa22.63■■□□□ 1.21
C19orf54-206ENST00000596940 ATP10AO60312 1499 aa22.63■■□□□ 1.21
C19orf54-206ENST00000596940 AFAP1Q8N556 730 aa22.62■■□□□ 1.21
C19orf54-206ENST00000596940 PCF11O94913 1555 aaKnown RBP22.6■■□□□ 1.21
C19orf54-206ENST00000596940 MLECQ14165 292 aa22.6■■□□□ 1.21
C19orf54-206ENST00000596940 C9orf84Q5VXU9 1444 aa22.58■■□□□ 1.21
C19orf54-206ENST00000596940 MADDQ8WXG6 1647 aa22.58■■□□□ 1.21
C19orf54-206ENST00000596940 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
C19orf54-206ENST00000596940 ILDR1Q86SU0 546 aaPredicted RBP22.52■■□□□ 1.2
C19orf54-206ENST00000596940 LRRIQ1Q96JM4 1722 aa22.51■■□□□ 1.19
C19orf54-206ENST00000596940 KDM5CP41229 1560 aa22.51■■□□□ 1.19
C19orf54-206ENST00000596940 ZNF777Q9ULD5 760 aaPredicted RBP22.51■■□□□ 1.19
C19orf54-206ENST00000596940 MLH3Q9UHC1 1453 aa22.51■■□□□ 1.19
C19orf54-206ENST00000596940 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
C19orf54-206ENST00000596940 CFDP1Q9UEE9 299 aaPredicted RBP22.48■■□□□ 1.19
C19orf54-206ENST00000596940 PREX2Q70Z35 1606 aa22.48■■□□□ 1.19
C19orf54-206ENST00000596940 RIMS1Q86UR5 1692 aaKnown RBP22.48■■□□□ 1.19
C19orf54-206ENST00000596940 TRAPPC8Q9Y2L5 1435 aa22.48■■□□□ 1.19
C19orf54-206ENST00000596940 CCNB3Q8WWL7 1395 aa22.47■■□□□ 1.19
C19orf54-206ENST00000596940 ESF1Q9H501 851 aaKnown RBP22.46■■□□□ 1.19
C19orf54-206ENST00000596940 LMTK3Q96Q04 1460 aa22.46■■□□□ 1.19
C19orf54-206ENST00000596940 ABCC1P33527 1531 aa22.46■■□□□ 1.19
C19orf54-206ENST00000596940 ARHGEF12Q9NZN5 1544 aa22.46■■□□□ 1.19
C19orf54-206ENST00000596940 GPATCH8Q9UKJ3 1502 aaKnown RBP22.45■■□□□ 1.18
C19orf54-206ENST00000596940 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.18
C19orf54-206ENST00000596940 CEP162Q5TB80 1403 aa22.43■■□□□ 1.18
C19orf54-206ENST00000596940 PLEKHH2Q8IVE3 1493 aa22.42■■□□□ 1.18
C19orf54-206ENST00000596940 KIAA1107Q9UPP5 1409 aa22.41■■□□□ 1.18
C19orf54-206ENST00000596940 SPAG9O60271 1321 aaKnown RBP22.41■■□□□ 1.18
C19orf54-206ENST00000596940 HNRNPMP52272 730 aaKnown RBP eCLIP22.41■■□□□ 1.18
C19orf54-206ENST00000596940 REREQ9P2R6 1566 aa22.41■■□□□ 1.18
C19orf54-206ENST00000596940 SIGLEC1Q9BZZ2 1709 aa22.4■■□□□ 1.18
C19orf54-206ENST00000596940 DIP2CQ9Y2E4 1556 aa22.39■■□□□ 1.18
C19orf54-206ENST00000596940 HSPA2P54652 639 aa22.39■■□□□ 1.17
C19orf54-206ENST00000596940 AGLP35573 1532 aa22.38■■□□□ 1.17
C19orf54-206ENST00000596940 CEBPAP49715 358 aaPredicted RBP22.38■■□□□ 1.17
C19orf54-206ENST00000596940 FER1L4A9Z1Z3 1794 aa22.37■■□□□ 1.17
C19orf54-206ENST00000596940 CDC42BPAQ5VT25 1732 aa22.36■■□□□ 1.17
C19orf54-206ENST00000596940 ITSN2Q9NZM3 1697 aa22.35■■□□□ 1.17
C19orf54-206ENST00000596940 ABCA6Q8N139 1617 aa22.33■■□□□ 1.17
C19orf54-206ENST00000596940 CNTLNQ9NXG0 1405 aa22.32■■□□□ 1.16
C19orf54-206ENST00000596940 SYCP2Q9BX26 1530 aa22.32■■□□□ 1.16
C19orf54-206ENST00000596940 FBXO41Q8TF61 875 aa22.32■■□□□ 1.16
C19orf54-206ENST00000596940 SAMD9LQ8IVG5 1584 aa22.32■■□□□ 1.16
C19orf54-206ENST00000596940 EHBP1L1Q8N3D4 1523 aa22.31■■□□□ 1.16
C19orf54-206ENST00000596940 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
C19orf54-206ENST00000596940 UHRF1BP1Q6BDS2 1440 aa22.29■■□□□ 1.16
C19orf54-206ENST00000596940 KIDINS220Q9ULH0 1771 aa22.28■■□□□ 1.16
C19orf54-206ENST00000596940 RSPH4AQ5TD94 716 aa22.28■■□□□ 1.16
C19orf54-206ENST00000596940 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
C19orf54-206ENST00000596940 ZNF644Q9H582 1327 aaPredicted RBP22.26■■□□□ 1.15
C19orf54-206ENST00000596940 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
C19orf54-206ENST00000596940 ATP7AQ04656 1500 aa22.24■■□□□ 1.15
C19orf54-206ENST00000596940 A2MP01023 1474 aa22.23■■□□□ 1.15
C19orf54-206ENST00000596940 RTEL1-TNFRSF6BF6WH68 1400 aa22.22■■□□□ 1.15
C19orf54-206ENST00000596940 VPS8Q8N3P4 1428 aa22.22■■□□□ 1.15
C19orf54-206ENST00000596940 SETD1BQ9UPS6 1966 aaKnown RBP22.21■■□□□ 1.15
C19orf54-206ENST00000596940 TIAM1Q13009 1591 aa22.21■■□□□ 1.15
C19orf54-206ENST00000596940 PREX1Q8TCU6 1659 aa22.21■■□□□ 1.15
C19orf54-206ENST00000596940 GGT6Q6P531 493 aa22.2■■□□□ 1.14
C19orf54-206ENST00000596940 ZMYM3Q14202 1370 aa22.2■■□□□ 1.14
C19orf54-206ENST00000596940 NCOA2Q15596 1464 aa22.2■■□□□ 1.14
C19orf54-206ENST00000596940 MBD5Q9P267 1494 aa22.2■■□□□ 1.14
C19orf54-206ENST00000596940 INO80Q9ULG1 1556 aaPredicted RBP22.17■■□□□ 1.14
C19orf54-206ENST00000596940 NPATQ14207 1427 aa22.17■■□□□ 1.14
C19orf54-206ENST00000596940 TSPY4P0CV99 314 aa22.17■■□□□ 1.14
C19orf54-206ENST00000596940 TSPY10P0CW01 314 aa22.17■■□□□ 1.14
C19orf54-206ENST00000596940 CERKQ8TCT0 537 aa22.15■■□□□ 1.14
C19orf54-206ENST00000596940 SUPT6HQ7KZ85 1726 aaKnown RBP22.14■■□□□ 1.14
C19orf54-206ENST00000596940 DHX29Q7Z478 1369 aaKnown RBP22.14■■□□□ 1.14
C19orf54-206ENST00000596940 PLXNC1O60486 1568 aa22.13■■□□□ 1.13
C19orf54-206ENST00000596940 CCDC141Q6ZP82 1450 aa22.13■■□□□ 1.13
C19orf54-206ENST00000596940 C3P01024 1663 aa22.12■■□□□ 1.13
C19orf54-206ENST00000596940 LRRC9Q6ZRR7 1453 aa22.12■■□□□ 1.13
C19orf54-206ENST00000596940 APLP2Q06481 763 aa22.12■■□□□ 1.13
C19orf54-206ENST00000596940 CAMSAP2Q08AD1 1489 aa22.1■■□□□ 1.13
C19orf54-206ENST00000596940 MAP3K1Q13233 1512 aa22.1■■□□□ 1.13
C19orf54-206ENST00000596940 KIF3BO15066 747 aa22.09■■□□□ 1.13
C19orf54-206ENST00000596940 MROH2AA6NES4 1674 aa22.07■■□□□ 1.12
C19orf54-206ENST00000596940 ADGBQ8N7X0 1667 aa22.07■■□□□ 1.12
C19orf54-206ENST00000596940 PTPRTO14522 1441 aa22.07■■□□□ 1.12
C19orf54-206ENST00000596940 KANK4Q5T7N3 995 aaPredicted RBP22.06■■□□□ 1.12
C19orf54-206ENST00000596940 PTPRKQ15262 1439 aa22.04■■□□□ 1.12
C19orf54-206ENST00000596940 MIA2Q96PC5 1412 aa22.03■■□□□ 1.12
C19orf54-206ENST00000596940 WASHC2CQ9Y4E1 1318 aa22.03■■□□□ 1.12
C19orf54-206ENST00000596940 NCOA1Q15788 1441 aa22.02■■□□□ 1.12
C19orf54-206ENST00000596940 ARHGEF5Q12774 1597 aa22.01■■□□□ 1.11
C19orf54-206ENST00000596940 PKD2Q13563 968 aa22■■□□□ 1.11
C19orf54-206ENST00000596940 MYOM3Q5VTT5 1437 aa21.99■■□□□ 1.11
C19orf54-206ENST00000596940 CLTCQ00610 1675 aaKnown RBP21.98■■□□□ 1.11
C19orf54-206ENST00000596940 STRCQ7RTU9 1775 aa21.98■■□□□ 1.11
C19orf54-206ENST00000596940 FAM135AQ9P2D6 1515 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms