RNA–Protein interactions for RNA: ENST00000596647.1

PDE4C-209, Transcript of phosphodiesterase 4C, humanhuman

TSL 3

Gene PDE4C, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-209ENST00000596647 FBXO41Q8TF61 875 aa25.29■■□□□ 1.64
PDE4C-209ENST00000596647 MYO5CQ9NQX4 1742 aa25.27■■□□□ 1.64
PDE4C-209ENST00000596647 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
PDE4C-209ENST00000596647 CDK11AQ9UQ88 783 aaPredicted RBP25.27■■□□□ 1.64
PDE4C-209ENST00000596647 EFCAB2Q5VUJ9 269 aa25.26■■□□□ 1.63
PDE4C-209ENST00000596647 ATP1B4Q9UN42 357 aaPredicted RBP25.25■■□□□ 1.63
PDE4C-209ENST00000596647 KIF14Q15058 1648 aa25.25■■□□□ 1.63
PDE4C-209ENST00000596647 TROQ12816 1431 aaPredicted RBP25.24■■□□□ 1.63
PDE4C-209ENST00000596647 ATP10AO60312 1499 aa25.23■■□□□ 1.63
PDE4C-209ENST00000596647 CHIC1Q5VXU3 224 aa25.23■■□□□ 1.63
PDE4C-209ENST00000596647 C9orf84Q5VXU9 1444 aa25.21■■□□□ 1.63
PDE4C-209ENST00000596647 ARHGEF12Q9NZN5 1544 aa25.2■■□□□ 1.62
PDE4C-209ENST00000596647 FER1L4A9Z1Z3 1794 aa25.2■■□□□ 1.62
PDE4C-209ENST00000596647 ZNF518AQ6AHZ1 1483 aa25.19■■□□□ 1.62
PDE4C-209ENST00000596647 HSPA2P54652 639 aa25.18■■□□□ 1.62
PDE4C-209ENST00000596647 MLECQ14165 292 aa25.18■■□□□ 1.62
PDE4C-209ENST00000596647 CLIP1P30622 1438 aa25.18■■□□□ 1.62
PDE4C-209ENST00000596647 KDM5CP41229 1560 aa25.17■■□□□ 1.62
PDE4C-209ENST00000596647 LRRIQ1Q96JM4 1722 aa25.17■■□□□ 1.62
PDE4C-209ENST00000596647 ARHGAP5Q13017 1502 aa25.17■■□□□ 1.62
PDE4C-209ENST00000596647 PLPPR3Q6T4P5 718 aa25.15■■□□□ 1.62
PDE4C-209ENST00000596647 AFAP1Q8N556 730 aa25.12■■□□□ 1.61
PDE4C-209ENST00000596647 CASKIN1Q8WXD9 1431 aa25.1■■□□□ 1.61
PDE4C-209ENST00000596647 REREQ9P2R6 1566 aa25.08■■□□□ 1.61
PDE4C-209ENST00000596647 DIP2CQ9Y2E4 1556 aa25.08■■□□□ 1.61
PDE4C-209ENST00000596647 CDC42BPBQ9Y5S2 1711 aa25.08■■□□□ 1.61
PDE4C-209ENST00000596647 CCDC18Q5T9S5 1454 aa25.08■■□□□ 1.6
PDE4C-209ENST00000596647 MLH3Q9UHC1 1453 aa25.06■■□□□ 1.6
PDE4C-209ENST00000596647 PREX2Q70Z35 1606 aa25.05■■□□□ 1.6
PDE4C-209ENST00000596647 PREX1Q8TCU6 1659 aa25.04■■□□□ 1.6
PDE4C-209ENST00000596647 ABCC1P33527 1531 aa25.04■■□□□ 1.6
PDE4C-209ENST00000596647 ABCA6Q8N139 1617 aa25.02■■□□□ 1.6
PDE4C-209ENST00000596647 CEBPAP49715 358 aaPredicted RBP25.02■■□□□ 1.6
PDE4C-209ENST00000596647 TRAPPC8Q9Y2L5 1435 aa25.01■■□□□ 1.59
PDE4C-209ENST00000596647 AGLP35573 1532 aa24.99■■□□□ 1.59
PDE4C-209ENST00000596647 ITSN2Q9NZM3 1697 aa24.98■■□□□ 1.59
PDE4C-209ENST00000596647 FYCO1Q9BQS8 1478 aa24.98■■□□□ 1.59
PDE4C-209ENST00000596647 MYT1LQ9UL68 1186 aa24.97■■□□□ 1.59
PDE4C-209ENST00000596647 CERKQ8TCT0 537 aa24.95■■□□□ 1.58
PDE4C-209ENST00000596647 CDC42BPAQ5VT25 1732 aa24.95■■□□□ 1.58
PDE4C-209ENST00000596647 UHRF1BP1Q6BDS2 1440 aa24.94■■□□□ 1.58
PDE4C-209ENST00000596647 KIDINS220Q9ULH0 1771 aa24.92■■□□□ 1.58
PDE4C-209ENST00000596647 SETD1BQ9UPS6 1966 aaKnown RBP24.91■■□□□ 1.58
PDE4C-209ENST00000596647 STRCQ7RTU9 1775 aa24.9■■□□□ 1.58
PDE4C-209ENST00000596647 C3P01024 1663 aa24.9■■□□□ 1.58
PDE4C-209ENST00000596647 SAMD9LQ8IVG5 1584 aa24.88■■□□□ 1.57
PDE4C-209ENST00000596647 GPATCH8Q9UKJ3 1502 aaKnown RBP24.87■■□□□ 1.57
PDE4C-209ENST00000596647 DMRT2Q9Y5R5 561 aa24.87■■□□□ 1.57
PDE4C-209ENST00000596647 CNTLNQ9NXG0 1405 aa24.86■■□□□ 1.57
PDE4C-209ENST00000596647 ESF1Q9H501 851 aaKnown RBP24.84■■□□□ 1.57
PDE4C-209ENST00000596647 SYCP2Q9BX26 1530 aa24.84■■□□□ 1.57
PDE4C-209ENST00000596647 KIAA1107Q9UPP5 1409 aa24.81■■□□□ 1.56
PDE4C-209ENST00000596647 ZNF777Q9ULD5 760 aaPredicted RBP24.81■■□□□ 1.56
PDE4C-209ENST00000596647 PTPRTO14522 1441 aa24.79■■□□□ 1.56
PDE4C-209ENST00000596647 SPAG9O60271 1321 aaKnown RBP24.79■■□□□ 1.56
PDE4C-209ENST00000596647 PLEKHH2Q8IVE3 1493 aa24.77■■□□□ 1.56
PDE4C-209ENST00000596647 HNRNPMP52272 730 aaKnown RBP eCLIP24.77■■□□□ 1.56
PDE4C-209ENST00000596647 MROH2AA6NES4 1674 aa24.77■■□□□ 1.56
PDE4C-209ENST00000596647 ATP7AQ04656 1500 aa24.76■■□□□ 1.55
PDE4C-209ENST00000596647 NPATQ14207 1427 aa24.76■■□□□ 1.55
PDE4C-209ENST00000596647 INO80Q9ULG1 1556 aaPredicted RBP24.76■■□□□ 1.55
PDE4C-209ENST00000596647 CFDP1Q9UEE9 299 aaPredicted RBP24.75■■□□□ 1.55
PDE4C-209ENST00000596647 CCNB3Q8WWL7 1395 aa24.75■■□□□ 1.55
PDE4C-209ENST00000596647 PLXNC1O60486 1568 aa24.75■■□□□ 1.55
PDE4C-209ENST00000596647 NCOA1Q15788 1441 aa24.74■■□□□ 1.55
PDE4C-209ENST00000596647 ZMYM3Q14202 1370 aa24.71■■□□□ 1.55
PDE4C-209ENST00000596647 MTUS2Q5JR59 1369 aa24.71■■□□□ 1.55
PDE4C-209ENST00000596647 SUPT6HQ7KZ85 1726 aaKnown RBP24.71■■□□□ 1.55
PDE4C-209ENST00000596647 A2MP01023 1474 aa24.7■■□□□ 1.55
PDE4C-209ENST00000596647 LTBP4Q8N2S1 1624 aa24.67■■□□□ 1.54
PDE4C-209ENST00000596647 TIAM1Q13009 1591 aa24.66■■□□□ 1.54
PDE4C-209ENST00000596647 CAMSAP1Q5T5Y3 1602 aa24.65■■□□□ 1.54
PDE4C-209ENST00000596647 CLTCQ00610 1675 aaKnown RBP24.64■■□□□ 1.53
PDE4C-209ENST00000596647 EHBP1L1Q8N3D4 1523 aa24.64■■□□□ 1.53
PDE4C-209ENST00000596647 MBD5Q9P267 1494 aa24.64■■□□□ 1.53
PDE4C-209ENST00000596647 ZNF644Q9H582 1327 aaPredicted RBP24.62■■□□□ 1.53
PDE4C-209ENST00000596647 ADGBQ8N7X0 1667 aa24.62■■□□□ 1.53
PDE4C-209ENST00000596647 PTPRKQ15262 1439 aa24.61■■□□□ 1.53
PDE4C-209ENST00000596647 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
PDE4C-209ENST00000596647 IQSEC2Q5JU85 1478 aa24.61■■□□□ 1.53
PDE4C-209ENST00000596647 ZNF142P52746 1687 aaPredicted RBP24.6■■□□□ 1.53
PDE4C-209ENST00000596647 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
PDE4C-209ENST00000596647 MYO3AQ8NEV4 1616 aa24.6■■□□□ 1.53
PDE4C-209ENST00000596647 RTEL1-TNFRSF6BF6WH68 1400 aa24.59■■□□□ 1.53
PDE4C-209ENST00000596647 GGT6Q6P531 493 aa24.58■■□□□ 1.53
PDE4C-209ENST00000596647 PLA2R1Q13018 1463 aa24.58■■□□□ 1.52
PDE4C-209ENST00000596647 CEP170BQ9Y4F5 1589 aaPredicted RBP24.56■■□□□ 1.52
PDE4C-209ENST00000596647 TCOF1Q13428 1488 aaKnown RBP24.54■■□□□ 1.52
PDE4C-209ENST00000596647 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
PDE4C-209ENST00000596647 DHX29Q7Z478 1369 aaKnown RBP24.53■■□□□ 1.52
PDE4C-209ENST00000596647 PKD2Q13563 968 aa24.52■■□□□ 1.52
PDE4C-209ENST00000596647 NCOA2Q15596 1464 aa24.49■■□□□ 1.51
PDE4C-209ENST00000596647 CCDC141Q6ZP82 1450 aa24.49■■□□□ 1.51
PDE4C-209ENST00000596647 ZNF335Q9H4Z2 1342 aaPredicted RBP24.48■■□□□ 1.51
PDE4C-209ENST00000596647 DISP3Q9P2K9 1392 aa24.48■■□□□ 1.51
PDE4C-209ENST00000596647 A2ML1A8K2U0 1454 aa24.47■■□□□ 1.51
PDE4C-209ENST00000596647 CAMSAP2Q08AD1 1489 aa24.47■■□□□ 1.51
PDE4C-209ENST00000596647 FAM135AQ9P2D6 1515 aa24.46■■□□□ 1.51
PDE4C-209ENST00000596647 RSPH4AQ5TD94 716 aa24.44■■□□□ 1.5
PDE4C-209ENST00000596647 DNMT1P26358 1616 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms