RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 EFCAB2Q5VUJ9 269 aa26.2■■□□□ 1.78
LINC02560-201ENST00000596379 POGZQ7Z3K3 1410 aa26.18■■□□□ 1.78
LINC02560-201ENST00000596379 SIGLEC1Q9BZZ2 1709 aa26.17■■□□□ 1.78
LINC02560-201ENST00000596379 MYO5CQ9NQX4 1742 aa26.17■■□□□ 1.78
LINC02560-201ENST00000596379 KIF14Q15058 1648 aa26.16■■□□□ 1.78
LINC02560-201ENST00000596379 PLPPR3Q6T4P5 718 aa26.15■■□□□ 1.78
LINC02560-201ENST00000596379 TROQ12816 1431 aaPredicted RBP26.14■■□□□ 1.78
LINC02560-201ENST00000596379 MLECQ14165 292 aa26.14■■□□□ 1.78
LINC02560-201ENST00000596379 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.77
LINC02560-201ENST00000596379 PCF11O94913 1555 aaKnown RBP26.13■■□□□ 1.77
LINC02560-201ENST00000596379 LMTK3Q96Q04 1460 aa26.11■■□□□ 1.77
LINC02560-201ENST00000596379 CLIP1P30622 1438 aa26.09■■□□□ 1.77
LINC02560-201ENST00000596379 ATP10AO60312 1499 aa26.09■■□□□ 1.77
LINC02560-201ENST00000596379 ARHGAP5Q13017 1502 aa26.07■■□□□ 1.76
LINC02560-201ENST00000596379 AFAP1Q8N556 730 aa26.05■■□□□ 1.76
LINC02560-201ENST00000596379 C9orf84Q5VXU9 1444 aa26.04■■□□□ 1.76
LINC02560-201ENST00000596379 FER1L4A9Z1Z3 1794 aa26.03■■□□□ 1.76
LINC02560-201ENST00000596379 HSPA2P54652 639 aa26.03■■□□□ 1.76
LINC02560-201ENST00000596379 CASKIN1Q8WXD9 1431 aa26.03■■□□□ 1.76
LINC02560-201ENST00000596379 ZNF518AQ6AHZ1 1483 aa26.02■■□□□ 1.76
LINC02560-201ENST00000596379 MYT1LQ9UL68 1186 aa26.01■■□□□ 1.75
LINC02560-201ENST00000596379 CDC42BPBQ9Y5S2 1711 aa26.01■■□□□ 1.75
LINC02560-201ENST00000596379 FBXO41Q8TF61 875 aa26■■□□□ 1.75
LINC02560-201ENST00000596379 CCDC18Q5T9S5 1454 aa25.99■■□□□ 1.75
LINC02560-201ENST00000596379 KDM5CP41229 1560 aa25.98■■□□□ 1.75
LINC02560-201ENST00000596379 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
LINC02560-201ENST00000596379 PREX2Q70Z35 1606 aa25.93■■□□□ 1.74
LINC02560-201ENST00000596379 CEBPAP49715 358 aaPredicted RBP25.93■■□□□ 1.74
LINC02560-201ENST00000596379 DIP2CQ9Y2E4 1556 aa25.9■■□□□ 1.74
LINC02560-201ENST00000596379 TRAPPC8Q9Y2L5 1435 aa25.9■■□□□ 1.74
LINC02560-201ENST00000596379 MLH3Q9UHC1 1453 aa25.9■■□□□ 1.74
LINC02560-201ENST00000596379 FYCO1Q9BQS8 1478 aa25.89■■□□□ 1.73
LINC02560-201ENST00000596379 ABCC1P33527 1531 aa25.88■■□□□ 1.73
LINC02560-201ENST00000596379 CDC42BPAQ5VT25 1732 aa25.88■■□□□ 1.73
LINC02560-201ENST00000596379 ITSN2Q9NZM3 1697 aa25.87■■□□□ 1.73
LINC02560-201ENST00000596379 ABCA6Q8N139 1617 aa25.86■■□□□ 1.73
LINC02560-201ENST00000596379 REREQ9P2R6 1566 aa25.85■■□□□ 1.73
LINC02560-201ENST00000596379 ZNF777Q9ULD5 760 aaPredicted RBP25.84■■□□□ 1.73
LINC02560-201ENST00000596379 PREX1Q8TCU6 1659 aa25.83■■□□□ 1.73
LINC02560-201ENST00000596379 SETD1BQ9UPS6 1966 aaKnown RBP25.8■■□□□ 1.72
LINC02560-201ENST00000596379 KIDINS220Q9ULH0 1771 aa25.79■■□□□ 1.72
LINC02560-201ENST00000596379 AGLP35573 1532 aa25.78■■□□□ 1.72
LINC02560-201ENST00000596379 GPATCH8Q9UKJ3 1502 aaKnown RBP25.78■■□□□ 1.72
LINC02560-201ENST00000596379 ESF1Q9H501 851 aaKnown RBP25.78■■□□□ 1.72
LINC02560-201ENST00000596379 HNRNPMP52272 730 aaKnown RBP eCLIP25.76■■□□□ 1.71
LINC02560-201ENST00000596379 SAMD9LQ8IVG5 1584 aa25.76■■□□□ 1.71
LINC02560-201ENST00000596379 UHRF1BP1Q6BDS2 1440 aa25.73■■□□□ 1.71
LINC02560-201ENST00000596379 CERKQ8TCT0 537 aa25.73■■□□□ 1.71
LINC02560-201ENST00000596379 CFDP1Q9UEE9 299 aaPredicted RBP25.73■■□□□ 1.71
LINC02560-201ENST00000596379 C3P01024 1663 aa25.73■■□□□ 1.71
LINC02560-201ENST00000596379 SYCP2Q9BX26 1530 aa25.72■■□□□ 1.71
LINC02560-201ENST00000596379 SPAG9O60271 1321 aaKnown RBP25.71■■□□□ 1.71
LINC02560-201ENST00000596379 CCNB3Q8WWL7 1395 aa25.69■■□□□ 1.7
LINC02560-201ENST00000596379 STRCQ7RTU9 1775 aa25.69■■□□□ 1.7
LINC02560-201ENST00000596379 MTUS2Q5JR59 1369 aa25.69■■□□□ 1.7
LINC02560-201ENST00000596379 DMRT2Q9Y5R5 561 aa25.68■■□□□ 1.7
LINC02560-201ENST00000596379 KIAA1107Q9UPP5 1409 aa25.67■■□□□ 1.7
LINC02560-201ENST00000596379 PLEKHH2Q8IVE3 1493 aa25.65■■□□□ 1.7
LINC02560-201ENST00000596379 CNTLNQ9NXG0 1405 aa25.64■■□□□ 1.7
LINC02560-201ENST00000596379 SUPT6HQ7KZ85 1726 aaKnown RBP25.63■■□□□ 1.69
LINC02560-201ENST00000596379 ATP7AQ04656 1500 aa25.63■■□□□ 1.69
LINC02560-201ENST00000596379 ZNF644Q9H582 1327 aaPredicted RBP25.6■■□□□ 1.69
LINC02560-201ENST00000596379 ZMYM3Q14202 1370 aa25.58■■□□□ 1.69
LINC02560-201ENST00000596379 INO80Q9ULG1 1556 aaPredicted RBP25.58■■□□□ 1.69
LINC02560-201ENST00000596379 A2MP01023 1474 aa25.57■■□□□ 1.68
LINC02560-201ENST00000596379 MROH2AA6NES4 1674 aa25.56■■□□□ 1.68
LINC02560-201ENST00000596379 TIAM1Q13009 1591 aa25.56■■□□□ 1.68
LINC02560-201ENST00000596379 CEP162Q5TB80 1403 aa25.55■■□□□ 1.68
LINC02560-201ENST00000596379 EHBP1L1Q8N3D4 1523 aa25.55■■□□□ 1.68
LINC02560-201ENST00000596379 PLXNC1O60486 1568 aa25.54■■□□□ 1.68
LINC02560-201ENST00000596379 GGT6Q6P531 493 aa25.54■■□□□ 1.68
LINC02560-201ENST00000596379 PTPRTO14522 1441 aa25.54■■□□□ 1.68
LINC02560-201ENST00000596379 NPATQ14207 1427 aa25.53■■□□□ 1.68
LINC02560-201ENST00000596379 CLTCQ00610 1675 aaKnown RBP25.52■■□□□ 1.68
LINC02560-201ENST00000596379 MBD5Q9P267 1494 aa25.51■■□□□ 1.67
LINC02560-201ENST00000596379 ADGBQ8N7X0 1667 aa25.49■■□□□ 1.67
LINC02560-201ENST00000596379 NCOA1Q15788 1441 aa25.48■■□□□ 1.67
LINC02560-201ENST00000596379 PPP6R1Q9UPN7 881 aa25.46■■□□□ 1.67
LINC02560-201ENST00000596379 CAMSAP1Q5T5Y3 1602 aa25.45■■□□□ 1.67
LINC02560-201ENST00000596379 RTEL1-TNFRSF6BF6WH68 1400 aa25.45■■□□□ 1.66
LINC02560-201ENST00000596379 NCOA2Q15596 1464 aa25.43■■□□□ 1.66
LINC02560-201ENST00000596379 PTPRKQ15262 1439 aa25.43■■□□□ 1.66
LINC02560-201ENST00000596379 DHX29Q7Z478 1369 aaKnown RBP25.42■■□□□ 1.66
LINC02560-201ENST00000596379 NCKAP5LQ9HCH0 1330 aa25.41■■□□□ 1.66
LINC02560-201ENST00000596379 LTBP4Q8N2S1 1624 aa25.39■■□□□ 1.66
LINC02560-201ENST00000596379 MYO3AQ8NEV4 1616 aa25.38■■□□□ 1.65
LINC02560-201ENST00000596379 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
LINC02560-201ENST00000596379 RSPH4AQ5TD94 716 aa25.38■■□□□ 1.65
LINC02560-201ENST00000596379 CAMSAP2Q08AD1 1489 aa25.37■■□□□ 1.65
LINC02560-201ENST00000596379 CCDC141Q6ZP82 1450 aa25.37■■□□□ 1.65
LINC02560-201ENST00000596379 KIF3BO15066 747 aa25.36■■□□□ 1.65
LINC02560-201ENST00000596379 ZNF142P52746 1687 aaPredicted RBP25.36■■□□□ 1.65
LINC02560-201ENST00000596379 CEP170BQ9Y4F5 1589 aaPredicted RBP25.35■■□□□ 1.65
LINC02560-201ENST00000596379 PKD2Q13563 968 aa25.34■■□□□ 1.65
LINC02560-201ENST00000596379 PLA2R1Q13018 1463 aa25.31■■□□□ 1.64
LINC02560-201ENST00000596379 TSPY4P0CV99 314 aa25.3■■□□□ 1.64
LINC02560-201ENST00000596379 TSPY10P0CW01 314 aa25.3■■□□□ 1.64
LINC02560-201ENST00000596379 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
LINC02560-201ENST00000596379 FBXO31Q5XUX0 539 aaPredicted RBP25.29■■□□□ 1.64
LINC02560-201ENST00000596379 ZNF335Q9H4Z2 1342 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms