RNA–Protein interactions for RNA: ENST00000595529.1

LTBP4-213, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-213ENST00000595529 PLCH2O75038 1416 aa23.9■■□□□ 1.42
LTBP4-213ENST00000595529 SIGLEC1Q9BZZ2 1709 aa23.9■■□□□ 1.42
LTBP4-213ENST00000595529 HECW1Q76N89 1606 aa23.89■■□□□ 1.42
LTBP4-213ENST00000595529 ATP1B4Q9UN42 357 aaPredicted RBP23.88■■□□□ 1.41
LTBP4-213ENST00000595529 CEP162Q5TB80 1403 aa23.87■■□□□ 1.41
LTBP4-213ENST00000595529 SCAPERQ9BY12 1400 aa23.86■■□□□ 1.41
LTBP4-213ENST00000595529 FMN1Q68DA7 1419 aa23.84■■□□□ 1.41
LTBP4-213ENST00000595529 HSPA2P54652 639 aa23.81■■□□□ 1.4
LTBP4-213ENST00000595529 FER1L4A9Z1Z3 1794 aa23.8■■□□□ 1.4
LTBP4-213ENST00000595529 ATP10AO60312 1499 aa23.8■■□□□ 1.4
LTBP4-213ENST00000595529 EFCAB2Q5VUJ9 269 aa23.79■■□□□ 1.4
LTBP4-213ENST00000595529 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
LTBP4-213ENST00000595529 C9orf84Q5VXU9 1444 aa23.78■■□□□ 1.4
LTBP4-213ENST00000595529 MLECQ14165 292 aa23.78■■□□□ 1.4
LTBP4-213ENST00000595529 CDK11AQ9UQ88 783 aaPredicted RBP23.78■■□□□ 1.4
LTBP4-213ENST00000595529 MYO5CQ9NQX4 1742 aa23.78■■□□□ 1.4
LTBP4-213ENST00000595529 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
LTBP4-213ENST00000595529 ZNF518AQ6AHZ1 1483 aa23.74■■□□□ 1.39
LTBP4-213ENST00000595529 KIF14Q15058 1648 aa23.73■■□□□ 1.39
LTBP4-213ENST00000595529 TROQ12816 1431 aaPredicted RBP23.73■■□□□ 1.39
LTBP4-213ENST00000595529 KDM5CP41229 1560 aa23.71■■□□□ 1.39
LTBP4-213ENST00000595529 ARHGAP5Q13017 1502 aa23.68■■□□□ 1.38
LTBP4-213ENST00000595529 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
LTBP4-213ENST00000595529 CERKQ8TCT0 537 aa23.67■■□□□ 1.38
LTBP4-213ENST00000595529 AFAP1Q8N556 730 aa23.65■■□□□ 1.38
LTBP4-213ENST00000595529 CASKIN1Q8WXD9 1431 aa23.65■■□□□ 1.38
LTBP4-213ENST00000595529 REREQ9P2R6 1566 aa23.65■■□□□ 1.38
LTBP4-213ENST00000595529 DIP2CQ9Y2E4 1556 aa23.62■■□□□ 1.37
LTBP4-213ENST00000595529 LRRIQ1Q96JM4 1722 aa23.62■■□□□ 1.37
LTBP4-213ENST00000595529 CEBPAP49715 358 aaPredicted RBP23.61■■□□□ 1.37
LTBP4-213ENST00000595529 MLH3Q9UHC1 1453 aa23.61■■□□□ 1.37
LTBP4-213ENST00000595529 CDC42BPBQ9Y5S2 1711 aa23.59■■□□□ 1.37
LTBP4-213ENST00000595529 FYCO1Q9BQS8 1478 aa23.58■■□□□ 1.37
LTBP4-213ENST00000595529 UHRF1BP1Q6BDS2 1440 aa23.58■■□□□ 1.36
LTBP4-213ENST00000595529 PREX2Q70Z35 1606 aa23.56■■□□□ 1.36
LTBP4-213ENST00000595529 ABCA6Q8N139 1617 aa23.56■■□□□ 1.36
LTBP4-213ENST00000595529 ABCC1P33527 1531 aa23.56■■□□□ 1.36
LTBP4-213ENST00000595529 AGLP35573 1532 aa23.56■■□□□ 1.36
LTBP4-213ENST00000595529 DMRT2Q9Y5R5 561 aa23.56■■□□□ 1.36
LTBP4-213ENST00000595529 VPS8Q8N3P4 1428 aa23.56■■□□□ 1.36
LTBP4-213ENST00000595529 SETD1BQ9UPS6 1966 aaKnown RBP23.56■■□□□ 1.36
LTBP4-213ENST00000595529 CCDC18Q5T9S5 1454 aa23.56■■□□□ 1.36
LTBP4-213ENST00000595529 MYT1LQ9UL68 1186 aa23.55■■□□□ 1.36
LTBP4-213ENST00000595529 STRCQ7RTU9 1775 aa23.55■■□□□ 1.36
LTBP4-213ENST00000595529 TRAPPC8Q9Y2L5 1435 aa23.53■■□□□ 1.36
LTBP4-213ENST00000595529 APLP2Q06481 763 aa23.53■■□□□ 1.36
LTBP4-213ENST00000595529 ITSN2Q9NZM3 1697 aa23.51■■□□□ 1.35
LTBP4-213ENST00000595529 C3P01024 1663 aa23.5■■□□□ 1.35
LTBP4-213ENST00000595529 PTPRTO14522 1441 aa23.47■■□□□ 1.35
LTBP4-213ENST00000595529 ESF1Q9H501 851 aaKnown RBP23.46■■□□□ 1.35
LTBP4-213ENST00000595529 CNTLNQ9NXG0 1405 aa23.46■■□□□ 1.35
LTBP4-213ENST00000595529 KIDINS220Q9ULH0 1771 aa23.46■■□□□ 1.35
LTBP4-213ENST00000595529 CDC42BPAQ5VT25 1732 aa23.45■■□□□ 1.34
LTBP4-213ENST00000595529 SAMD9LQ8IVG5 1584 aa23.41■■□□□ 1.34
LTBP4-213ENST00000595529 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
LTBP4-213ENST00000595529 NCOA1Q15788 1441 aa23.38■■□□□ 1.33
LTBP4-213ENST00000595529 NPATQ14207 1427 aa23.37■■□□□ 1.33
LTBP4-213ENST00000595529 GPATCH8Q9UKJ3 1502 aaKnown RBP23.37■■□□□ 1.33
LTBP4-213ENST00000595529 MROH2AA6NES4 1674 aa23.36■■□□□ 1.33
LTBP4-213ENST00000595529 SYCP2Q9BX26 1530 aa23.36■■□□□ 1.33
LTBP4-213ENST00000595529 LTBP4Q8N2S1 1624 aa23.34■■□□□ 1.33
LTBP4-213ENST00000595529 SPAG9O60271 1321 aaKnown RBP23.33■■□□□ 1.33
LTBP4-213ENST00000595529 KIAA1107Q9UPP5 1409 aa23.33■■□□□ 1.33
LTBP4-213ENST00000595529 IQSEC2Q5JU85 1478 aa23.33■■□□□ 1.33
LTBP4-213ENST00000595529 ZNF777Q9ULD5 760 aaPredicted RBP23.33■■□□□ 1.33
LTBP4-213ENST00000595529 PLEKHH2Q8IVE3 1493 aa23.31■■□□□ 1.32
LTBP4-213ENST00000595529 ZMYM3Q14202 1370 aa23.31■■□□□ 1.32
LTBP4-213ENST00000595529 ATP7AQ04656 1500 aa23.3■■□□□ 1.32
LTBP4-213ENST00000595529 HNRNPMP52272 730 aaKnown RBP eCLIP23.3■■□□□ 1.32
LTBP4-213ENST00000595529 PLXNC1O60486 1568 aa23.3■■□□□ 1.32
LTBP4-213ENST00000595529 TIAM1Q13009 1591 aa23.29■■□□□ 1.32
LTBP4-213ENST00000595529 MAP3K1Q13233 1512 aa23.28■■□□□ 1.32
LTBP4-213ENST00000595529 DISP3Q9P2K9 1392 aa23.28■■□□□ 1.32
LTBP4-213ENST00000595529 INO80Q9ULG1 1556 aaPredicted RBP23.28■■□□□ 1.32
LTBP4-213ENST00000595529 CAMSAP1Q5T5Y3 1602 aa23.28■■□□□ 1.32
LTBP4-213ENST00000595529 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.32
LTBP4-213ENST00000595529 CFDP1Q9UEE9 299 aaPredicted RBP23.27■■□□□ 1.32
LTBP4-213ENST00000595529 SUPT6HQ7KZ85 1726 aaKnown RBP23.27■■□□□ 1.32
LTBP4-213ENST00000595529 A2MP01023 1474 aa23.26■■□□□ 1.31
LTBP4-213ENST00000595529 CCNB3Q8WWL7 1395 aa23.25■■□□□ 1.31
LTBP4-213ENST00000595529 EHBP1L1Q8N3D4 1523 aa23.24■■□□□ 1.31
LTBP4-213ENST00000595529 LRRC9Q6ZRR7 1453 aa23.24■■□□□ 1.31
LTBP4-213ENST00000595529 ZNF142P52746 1687 aaPredicted RBP23.22■■□□□ 1.31
LTBP4-213ENST00000595529 CLTCQ00610 1675 aaKnown RBP23.22■■□□□ 1.31
LTBP4-213ENST00000595529 ILDR2Q71H61 639 aa23.22■■□□□ 1.31
LTBP4-213ENST00000595529 PLA2R1Q13018 1463 aa23.22■■□□□ 1.31
LTBP4-213ENST00000595529 PTPRKQ15262 1439 aa23.21■■□□□ 1.31
LTBP4-213ENST00000595529 MYO3AQ8NEV4 1616 aa23.21■■□□□ 1.31
LTBP4-213ENST00000595529 PPP6R1Q9UPN7 881 aa23.2■■□□□ 1.3
LTBP4-213ENST00000595529 PKD2Q13563 968 aa23.19■■□□□ 1.3
LTBP4-213ENST00000595529 NCKAP5LQ9HCH0 1330 aa23.18■■□□□ 1.3
LTBP4-213ENST00000595529 SPATA31D1Q6ZQQ2 1576 aa23.18■■□□□ 1.3
LTBP4-213ENST00000595529 CEP170BQ9Y4F5 1589 aaPredicted RBP23.18■■□□□ 1.3
LTBP4-213ENST00000595529 TCOF1Q13428 1488 aaKnown RBP23.17■■□□□ 1.3
LTBP4-213ENST00000595529 ADGBQ8N7X0 1667 aa23.17■■□□□ 1.3
LTBP4-213ENST00000595529 SOCS7O14512 581 aa23.17■■□□□ 1.3
LTBP4-213ENST00000595529 GGT6Q6P531 493 aa23.16■■□□□ 1.3
LTBP4-213ENST00000595529 MBD5Q9P267 1494 aa23.15■■□□□ 1.3
LTBP4-213ENST00000595529 ZNF335Q9H4Z2 1342 aaPredicted RBP23.14■■□□□ 1.3
LTBP4-213ENST00000595529 NCOA2Q15596 1464 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms