RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 FRAT1Q92837 279 aaPredicted RBP9.74□□□□□ -0.85
LINC00347-202ENST00000594461 ARID3AQ99856 593 aa9.74□□□□□ -0.85
LINC00347-202ENST00000594461 ZHX1Q9UKY1 873 aaPredicted RBP9.73□□□□□ -0.85
LINC00347-202ENST00000594461 HDAC5Q9UQL6 1122 aa9.73□□□□□ -0.85
LINC00347-202ENST00000594461 MCCP23508 829 aa9.73□□□□□ -0.85
LINC00347-202ENST00000594461 ZNF622Q969S3 477 aaKnown RBP eCLIP9.73□□□□□ -0.85
LINC00347-202ENST00000594461 TPM2P07951 284 aa9.72□□□□□ -0.85
LINC00347-202ENST00000594461 CLCN1P35523 988 aa9.72□□□□□ -0.85
LINC00347-202ENST00000594461 PPP4R3BQ5MIZ7 849 aa9.72□□□□□ -0.85
LINC00347-202ENST00000594461 MROH2BQ7Z745 1585 aa9.72□□□□□ -0.85
LINC00347-202ENST00000594461 DCAF11Q8TEB1 546 aa9.71□□□□□ -0.85
LINC00347-202ENST00000594461 PUS7Q96PZ0 661 aaKnown RBP9.71□□□□□ -0.86
LINC00347-202ENST00000594461 PTMSP20962 102 aa9.7□□□□□ -0.86
LINC00347-202ENST00000594461 AXDND1Q5T1B0 1012 aaPredicted RBP9.7□□□□□ -0.86
LINC00347-202ENST00000594461 SLC52A1Q9NWF4 448 aa9.7□□□□□ -0.86
LINC00347-202ENST00000594461 APPP05067 770 aa9.68□□□□□ -0.86
LINC00347-202ENST00000594461 MAP7D2Q96T17 732 aa9.68□□□□□ -0.86
LINC00347-202ENST00000594461 LAS1LQ9Y4W2 734 aaKnown RBP9.68□□□□□ -0.86
LINC00347-202ENST00000594461 RSF1Q96T23 1441 aaPredicted RBP9.67□□□□□ -0.86
LINC00347-202ENST00000594461 DMTNQ08495 405 aa9.67□□□□□ -0.86
LINC00347-202ENST00000594461 PHF14O94880 888 aa9.66□□□□□ -0.86
LINC00347-202ENST00000594461 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
LINC00347-202ENST00000594461 TNNT2P45379 298 aaPredicted RBP9.66□□□□□ -0.86
LINC00347-202ENST00000594461 PSEN1P49768 467 aa9.66□□□□□ -0.86
LINC00347-202ENST00000594461 PPP4R2Q9NY27 417 aa9.66□□□□□ -0.86
LINC00347-202ENST00000594461 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
LINC00347-202ENST00000594461 PSMD1Q99460 953 aa9.65□□□□□ -0.86
LINC00347-202ENST00000594461 WIZO95785 1651 aa9.65□□□□□ -0.86
LINC00347-202ENST00000594461 KIF20AO95235 890 aa9.64□□□□□ -0.87
LINC00347-202ENST00000594461 DNTTIP2Q5QJE6 756 aaKnown RBP9.64□□□□□ -0.87
LINC00347-202ENST00000594461 TAF3Q5VWG9 929 aa9.64□□□□□ -0.87
LINC00347-202ENST00000594461 SMARCA4P51532 1647 aa9.63□□□□□ -0.87
LINC00347-202ENST00000594461 BAZ1AQ9NRL2 1556 aaPredicted RBP9.62□□□□□ -0.87
LINC00347-202ENST00000594461 EIF4G1Q04637 1599 aaKnown RBP9.61□□□□□ -0.87
LINC00347-202ENST00000594461 PLCB2Q00722 1185 aa9.61□□□□□ -0.87
LINC00347-202ENST00000594461 SOX12O15370 315 aa9.6□□□□□ -0.87
LINC00347-202ENST00000594461 SETQ01105 290 aaPredicted RBP9.59□□□□□ -0.87
LINC00347-202ENST00000594461 E9PSI1 815 aa9.59□□□□□ -0.87
LINC00347-202ENST00000594461 NFKBIBQ15653 356 aa9.59□□□□□ -0.87
LINC00347-202ENST00000594461 KCNH8Q96L42 1107 aa9.59□□□□□ -0.87
LINC00347-202ENST00000594461 OS9Q13438 667 aaPredicted RBP9.58□□□□□ -0.88
LINC00347-202ENST00000594461 CC2D1BQ5T0F9 858 aaKnown RBP9.58□□□□□ -0.88
LINC00347-202ENST00000594461 PRDM16Q9HAZ2 1276 aa9.58□□□□□ -0.88
LINC00347-202ENST00000594461 DNAJC5BQ9UF47 199 aa9.58□□□□□ -0.88
LINC00347-202ENST00000594461 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
LINC00347-202ENST00000594461 SLC20A2Q08357 652 aa9.57□□□□□ -0.88
LINC00347-202ENST00000594461 LETM1O95202 739 aaPredicted RBP9.56□□□□□ -0.88
LINC00347-202ENST00000594461 L1TD1Q5T7N2 865 aaKnown RBP9.56□□□□□ -0.88
LINC00347-202ENST00000594461 GTPBP4Q9BZE4 634 aaKnown RBP9.56□□□□□ -0.88
LINC00347-202ENST00000594461 MTERF4Q7Z6M4 381 aaKnown RBP9.56□□□□□ -0.88
LINC00347-202ENST00000594461 CERS3Q8IU89 383 aa9.56□□□□□ -0.88
LINC00347-202ENST00000594461 DNAJC2Q99543 621 aaKnown RBP9.55□□□□□ -0.88
LINC00347-202ENST00000594461 CARD10Q9BWT7 1032 aa9.55□□□□□ -0.88
LINC00347-202ENST00000594461 ZSCAN20P17040 1043 aaPredicted RBP9.55□□□□□ -0.88
LINC00347-202ENST00000594461 NGEFQ8N5V2 710 aa9.55□□□□□ -0.88
LINC00347-202ENST00000594461 TRIM44Q96DX7 344 aaPredicted RBP9.55□□□□□ -0.88
LINC00347-202ENST00000594461 CC2D2AQ9P2K1 1620 aa9.54□□□□□ -0.88
LINC00347-202ENST00000594461 RALBP1Q15311 655 aa9.53□□□□□ -0.88
LINC00347-202ENST00000594461 EGFL6Q8IUX8 553 aa9.53□□□□□ -0.88
LINC00347-202ENST00000594461 CEP120Q8N960 986 aa9.53□□□□□ -0.88
LINC00347-202ENST00000594461 YY1AP1Q9H869 796 aa9.52□□□□□ -0.88
LINC00347-202ENST00000594461 ATAD2BQ9ULI0 1458 aa9.52□□□□□ -0.89
LINC00347-202ENST00000594461 GEMIN8Q9NWZ8 242 aaKnown RBP9.52□□□□□ -0.89
LINC00347-202ENST00000594461 ANAPC15P60006 121 aa9.51□□□□□ -0.89
LINC00347-202ENST00000594461 NBPF20Q3BBV1 942 aa9.51□□□□□ -0.89
LINC00347-202ENST00000594461 GPATCH11Q8N954 259 aa9.51□□□□□ -0.89
LINC00347-202ENST00000594461 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
LINC00347-202ENST00000594461 GOLGA6L3A6NEY3 463 aa9.5□□□□□ -0.89
LINC00347-202ENST00000594461 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
LINC00347-202ENST00000594461 AEBP1Q8IUX7 1158 aa9.5□□□□□ -0.89
LINC00347-202ENST00000594461 TERF1P54274 439 aa9.49□□□□□ -0.89
LINC00347-202ENST00000594461 CC2D2BQ6DHV5 1058 aa9.49□□□□□ -0.89
LINC00347-202ENST00000594461 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
LINC00347-202ENST00000594461 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
LINC00347-202ENST00000594461 SH3BP1Q9Y3L3 701 aa9.48□□□□□ -0.89
LINC00347-202ENST00000594461 ZBTB22O15209 634 aa9.48□□□□□ -0.89
LINC00347-202ENST00000594461 TRIM52Q96A61 297 aa9.48□□□□□ -0.89
LINC00347-202ENST00000594461 RIPK4P57078 832 aa9.46□□□□□ -0.89
LINC00347-202ENST00000594461 KIAA1211Q6ZU35 1233 aa9.46□□□□□ -0.89
LINC00347-202ENST00000594461 CWC22Q9HCG8 908 aaKnown RBP9.46□□□□□ -0.89
LINC00347-202ENST00000594461 TCERG1O14776 1098 aaKnown RBP9.46□□□□□ -0.9
LINC00347-202ENST00000594461 IRX5P78411 483 aaPredicted RBP9.46□□□□□ -0.9
LINC00347-202ENST00000594461 MAFGO15525 162 aa9.45□□□□□ -0.9
LINC00347-202ENST00000594461 FAM13BQ9NYF5 915 aa9.45□□□□□ -0.9
LINC00347-202ENST00000594461 EEA1Q15075 1411 aa9.45□□□□□ -0.9
LINC00347-202ENST00000594461 SMARCA2P51531 1590 aa9.45□□□□□ -0.9
LINC00347-202ENST00000594461 ESPNB1AK53 854 aa9.44□□□□□ -0.9
LINC00347-202ENST00000594461 TOP2AP11388 1531 aaKnown RBP9.44□□□□□ -0.9
LINC00347-202ENST00000594461 HSP90AB3PQ58FF7 597 aa9.44□□□□□ -0.9
LINC00347-202ENST00000594461 CHMP4CQ96CF2 233 aa9.44□□□□□ -0.9
LINC00347-202ENST00000594461 IRF6O14896 467 aa9.43□□□□□ -0.9
LINC00347-202ENST00000594461 NBPF1Q3BBV0 1214 aa9.43□□□□□ -0.9
LINC00347-202ENST00000594461 NBPF11Q86T75 865 aa9.43□□□□□ -0.9
LINC00347-202ENST00000594461 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
LINC00347-202ENST00000594461 SEMA3FQ13275 785 aa9.43□□□□□ -0.9
LINC00347-202ENST00000594461 ZNF692Q9BU19 519 aaPredicted RBP9.43□□□□□ -0.9
LINC00347-202ENST00000594461 CCDC94Q9BW85 323 aaPredicted RBP9.43□□□□□ -0.9
LINC00347-202ENST00000594461 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
LINC00347-202ENST00000594461 TTC36A6NLP5 189 aa9.42□□□□□ -0.9
LINC00347-202ENST00000594461 CCER2I3L3R5 266 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms