RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 B4GALNT3Q6L9W6 998 aa19.46■□□□□ 0.71
COLGALT1-202ENST00000593832 EIF4G3O43432 1585 aaKnown RBP19.45■□□□□ 0.7
COLGALT1-202ENST00000593832 ADAMTS12P58397 1594 aa19.45■□□□□ 0.7
COLGALT1-202ENST00000593832 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.7
COLGALT1-202ENST00000593832 PRKRIP1Q9H875 184 aaPredicted RBP19.44■□□□□ 0.7
COLGALT1-202ENST00000593832 ZBED9Q6R2W3 1325 aa19.43■□□□□ 0.7
COLGALT1-202ENST00000593832 C11orf95C9JLR9 678 aaPredicted RBP19.43■□□□□ 0.7
COLGALT1-202ENST00000593832 LRRIQ1Q96JM4 1722 aa19.43■□□□□ 0.7
COLGALT1-202ENST00000593832 FAM9BQ8IZU0 186 aa19.41■□□□□ 0.7
COLGALT1-202ENST00000593832 NCOA1Q15788 1441 aa19.4■□□□□ 0.7
COLGALT1-202ENST00000593832 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
COLGALT1-202ENST00000593832 CCDC7Q96M83 1385 aa19.39■□□□□ 0.69
COLGALT1-202ENST00000593832 ARID3CA6NKF2 412 aa19.38■□□□□ 0.69
COLGALT1-202ENST00000593832 MRS2Q9HD23 443 aa19.38■□□□□ 0.69
COLGALT1-202ENST00000593832 HECW1Q76N89 1606 aa19.38■□□□□ 0.69
COLGALT1-202ENST00000593832 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
COLGALT1-202ENST00000593832 RRP7BPQ9NSQ0 103 aa19.37■□□□□ 0.69
COLGALT1-202ENST00000593832 SUPT6HQ7KZ85 1726 aaKnown RBP19.36■□□□□ 0.69
COLGALT1-202ENST00000593832 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
COLGALT1-202ENST00000593832 SAMD9Q5K651 1589 aa19.34■□□□□ 0.69
COLGALT1-202ENST00000593832 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
COLGALT1-202ENST00000593832 IQGAP2Q13576 1575 aa19.34■□□□□ 0.69
COLGALT1-202ENST00000593832 UGGT2Q9NYU1 1516 aa19.34■□□□□ 0.69
COLGALT1-202ENST00000593832 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
COLGALT1-202ENST00000593832 NOP58Q9Y2X3 529 aaKnown RBP19.34■□□□□ 0.69
COLGALT1-202ENST00000593832 EHBP1L1Q8N3D4 1523 aa19.33■□□□□ 0.69
COLGALT1-202ENST00000593832 KDM6BO15054 1643 aa19.32■□□□□ 0.68
COLGALT1-202ENST00000593832 PAK3O75914 559 aaPredicted RBP19.31■□□□□ 0.68
COLGALT1-202ENST00000593832 CHIC2Q9UKJ5 165 aa19.31■□□□□ 0.68
COLGALT1-202ENST00000593832 TCOF1Q13428 1488 aaKnown RBP19.3■□□□□ 0.68
COLGALT1-202ENST00000593832 MPHOSPH9Q99550 1183 aa19.3■□□□□ 0.68
COLGALT1-202ENST00000593832 AKNAQ7Z591 1439 aa19.3■□□□□ 0.68
COLGALT1-202ENST00000593832 MAGI3Q5TCQ9 1506 aa19.29■□□□□ 0.68
COLGALT1-202ENST00000593832 GRIN2AQ12879 1464 aa19.29■□□□□ 0.68
COLGALT1-202ENST00000593832 PODXL2Q9NZ53 605 aa19.28■□□□□ 0.68
COLGALT1-202ENST00000593832 NBPF8Q3BBV2 869 aa19.27■□□□□ 0.67
COLGALT1-202ENST00000593832 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.67
COLGALT1-202ENST00000593832 KIF7Q2M1P5 1343 aa19.26■□□□□ 0.67
COLGALT1-202ENST00000593832 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
COLGALT1-202ENST00000593832 FOXD1Q16676 465 aa19.25■□□□□ 0.67
COLGALT1-202ENST00000593832 RNF123Q5XPI4 1314 aa19.24■□□□□ 0.67
COLGALT1-202ENST00000593832 MAGI1Q96QZ7 1491 aaPredicted RBP19.24■□□□□ 0.67
COLGALT1-202ENST00000593832 POLR1AO95602 1720 aaPredicted RBP19.22■□□□□ 0.67
COLGALT1-202ENST00000593832 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
COLGALT1-202ENST00000593832 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
COLGALT1-202ENST00000593832 TEX14Q8IWB6 1497 aa19.22■□□□□ 0.67
COLGALT1-202ENST00000593832 ANKRD30BQ9BXX2 1392 aa19.22■□□□□ 0.67
COLGALT1-202ENST00000593832 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
COLGALT1-202ENST00000593832 RTL5Q5HYW3 569 aaPredicted RBP19.19■□□□□ 0.66
COLGALT1-202ENST00000593832 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
COLGALT1-202ENST00000593832 IPO9Q96P70 1041 aaKnown RBP19.18■□□□□ 0.66
COLGALT1-202ENST00000593832 CEP170Q5SW79 1584 aa19.18■□□□□ 0.66
COLGALT1-202ENST00000593832 DHX29Q7Z478 1369 aaKnown RBP19.17■□□□□ 0.66
COLGALT1-202ENST00000593832 MIA2Q96PC5 1412 aa19.15■□□□□ 0.66
COLGALT1-202ENST00000593832 ANP32AP39687 249 aaKnown RBP19.14■□□□□ 0.66
COLGALT1-202ENST00000593832 DISP1Q96F81 1524 aa19.14■□□□□ 0.65
COLGALT1-202ENST00000593832 CDK13Q14004 1512 aaKnown RBP19.14■□□□□ 0.65
COLGALT1-202ENST00000593832 KIAA0556O60303 1618 aa19.13■□□□□ 0.65
COLGALT1-202ENST00000593832 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
COLGALT1-202ENST00000593832 EPRSP07814 1512 aaKnown RBP19.09■□□□□ 0.65
COLGALT1-202ENST00000593832 ZBTB47Q9UFB7 747 aaPredicted RBP19.09■□□□□ 0.65
COLGALT1-202ENST00000593832 ROCK1Q13464 1354 aa19.09■□□□□ 0.65
COLGALT1-202ENST00000593832 BCORL1Q5H9F3 1711 aa19.06■□□□□ 0.64
COLGALT1-202ENST00000593832 PNISRQ8TF01 805 aaKnown RBP19.06■□□□□ 0.64
COLGALT1-202ENST00000593832 DAPK1P53355 1430 aa19.06■□□□□ 0.64
COLGALT1-202ENST00000593832 NUP160Q12769 1436 aa19.05■□□□□ 0.64
COLGALT1-202ENST00000593832 SLC4A1APQ9BWU0 796 aaKnown RBP19.05■□□□□ 0.64
COLGALT1-202ENST00000593832 CNGB1Q14028 1251 aaPredicted RBP19.04■□□□□ 0.64
COLGALT1-202ENST00000593832 ABCC5O15440 1437 aa19.03■□□□□ 0.64
COLGALT1-202ENST00000593832 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
COLGALT1-202ENST00000593832 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
COLGALT1-202ENST00000593832 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.64
COLGALT1-202ENST00000593832 CHD1O14646 1710 aa19.02■□□□□ 0.64
COLGALT1-202ENST00000593832 VSIG10Q8N0Z9 540 aa19.01■□□□□ 0.63
COLGALT1-202ENST00000593832 USP47Q96K76 1375 aa19.01■□□□□ 0.63
COLGALT1-202ENST00000593832 CARMIL2Q6F5E8 1435 aa19.01■□□□□ 0.63
COLGALT1-202ENST00000593832 BRPF3Q9ULD4 1205 aa19.01■□□□□ 0.63
COLGALT1-202ENST00000593832 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
COLGALT1-202ENST00000593832 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
COLGALT1-202ENST00000593832 NUP153P49790 1475 aaKnown RBP18.99■□□□□ 0.63
COLGALT1-202ENST00000593832 PZPP20742 1482 aa18.99■□□□□ 0.63
COLGALT1-202ENST00000593832 ARID4BQ4LE39 1312 aaPredicted RBP18.98■□□□□ 0.63
COLGALT1-202ENST00000593832 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
COLGALT1-202ENST00000593832 LRPPRCP42704 1394 aaKnown RBP18.97■□□□□ 0.63
COLGALT1-202ENST00000593832 ZNF644Q9H582 1327 aaPredicted RBP18.97■□□□□ 0.63
COLGALT1-202ENST00000593832 ZMYND15Q9H091 742 aa18.97■□□□□ 0.63
COLGALT1-202ENST00000593832 KDM5CP41229 1560 aa18.96■□□□□ 0.63
COLGALT1-202ENST00000593832 TMC1Q8TDI8 760 aa18.96■□□□□ 0.63
COLGALT1-202ENST00000593832 A0A0U1RQG5 324 aaPredicted RBP18.95■□□□□ 0.62
COLGALT1-202ENST00000593832 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
COLGALT1-202ENST00000593832 RRP1P56182 461 aaKnown RBP18.94■□□□□ 0.62
COLGALT1-202ENST00000593832 EXOC6Q8TAG9 804 aa18.93■□□□□ 0.62
COLGALT1-202ENST00000593832 KIF14Q15058 1648 aa18.92■□□□□ 0.62
COLGALT1-202ENST00000593832 TCERG1O14776 1098 aaKnown RBP18.92■□□□□ 0.62
COLGALT1-202ENST00000593832 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
COLGALT1-202ENST00000593832 ZNF326Q5BKZ1 582 aaKnown RBP18.91■□□□□ 0.62
COLGALT1-202ENST00000593832 PDE4AP27815 886 aa18.9■□□□□ 0.62
COLGALT1-202ENST00000593832 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
COLGALT1-202ENST00000593832 DAXXQ9UER7 740 aaPredicted RBP18.9■□□□□ 0.62
COLGALT1-202ENST00000593832 KIAA1107Q9UPP5 1409 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms