RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 KIF14Q15058 1648 aa28.03■■■□□ 2.08
GHDC-212ENST00000593209 MIA2Q96PC5 1412 aa28.01■■■□□ 2.07
GHDC-212ENST00000593209 CLSPNQ9HAW4 1339 aa28.01■■■□□ 2.07
GHDC-212ENST00000593209 ITSN2Q9NZM3 1697 aa27.96■■■□□ 2.07
GHDC-212ENST00000593209 TSPOAP1O95153 1857 aa27.95■■■□□ 2.07
GHDC-212ENST00000593209 GCC2Q8IWJ2 1684 aa27.93■■■□□ 2.06
GHDC-212ENST00000593209 HFM1A2PYH4 1435 aa27.93■■■□□ 2.06
GHDC-212ENST00000593209 GLI2P10070 1586 aa27.92■■■□□ 2.06
GHDC-212ENST00000593209 CDC42BPAQ5VT25 1732 aa27.89■■■□□ 2.06
GHDC-212ENST00000593209 DNMT1P26358 1616 aaKnown RBP27.88■■■□□ 2.05
GHDC-212ENST00000593209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.87■■■□□ 2.05
GHDC-212ENST00000593209 NAIPQ13075 1403 aa27.87■■■□□ 2.05
GHDC-212ENST00000593209 MAP3K4Q9Y6R4 1608 aa27.87■■■□□ 2.05
GHDC-212ENST00000593209 TTC37Q6PGP7 1564 aa27.85■■■□□ 2.05
GHDC-212ENST00000593209 GPATCH8Q9UKJ3 1502 aaKnown RBP27.84■■■□□ 2.05
GHDC-212ENST00000593209 ABCA9Q8IUA7 1624 aa27.84■■■□□ 2.05
GHDC-212ENST00000593209 PPRC1Q5VV67 1664 aaKnown RBP27.82■■■□□ 2.04
GHDC-212ENST00000593209 AKNAQ7Z591 1439 aa27.82■■■□□ 2.04
GHDC-212ENST00000593209 CD109Q6YHK3 1445 aa27.8■■■□□ 2.04
GHDC-212ENST00000593209 CAMSAP2Q08AD1 1489 aa27.79■■■□□ 2.04
GHDC-212ENST00000593209 KDM6BO15054 1643 aa27.79■■■□□ 2.04
GHDC-212ENST00000593209 DAPK1P53355 1430 aa27.79■■■□□ 2.04
GHDC-212ENST00000593209 CROCC2H7BZ55 1655 aa27.78■■■□□ 2.04
GHDC-212ENST00000593209 CDC42BPBQ9Y5S2 1711 aa27.77■■■□□ 2.04
GHDC-212ENST00000593209 ZNF644Q9H582 1327 aaPredicted RBP27.76■■■□□ 2.03
GHDC-212ENST00000593209 MYO5CQ9NQX4 1742 aa27.76■■■□□ 2.03
GHDC-212ENST00000593209 ABCC5O15440 1437 aa27.75■■■□□ 2.03
GHDC-212ENST00000593209 PREX2Q70Z35 1606 aa27.74■■■□□ 2.03
GHDC-212ENST00000593209 CFDP1Q9UEE9 299 aaPredicted RBP27.73■■■□□ 2.03
GHDC-212ENST00000593209 ADGBQ8N7X0 1667 aa27.72■■■□□ 2.03
GHDC-212ENST00000593209 CHIC2Q9UKJ5 165 aa27.68■■■□□ 2.02
GHDC-212ENST00000593209 PLCH2O75038 1416 aa27.68■■■□□ 2.02
GHDC-212ENST00000593209 ROCK1Q13464 1354 aa27.66■■■□□ 2.02
GHDC-212ENST00000593209 RRP7BPQ9NSQ0 103 aa27.66■■■□□ 2.02
GHDC-212ENST00000593209 ZNF777Q9ULD5 760 aaPredicted RBP27.65■■■□□ 2.02
GHDC-212ENST00000593209 TEX14Q8IWB6 1497 aa27.65■■■□□ 2.02
GHDC-212ENST00000593209 ARHGAP5Q13017 1502 aa27.65■■■□□ 2.02
GHDC-212ENST00000593209 SAMD9LQ8IVG5 1584 aa27.6■■■□□ 2.01
GHDC-212ENST00000593209 ARAP3Q8WWN8 1544 aa27.6■■■□□ 2.01
GHDC-212ENST00000593209 FANCAO15360 1455 aa27.59■■■□□ 2.01
GHDC-212ENST00000593209 DENND4BO75064 1496 aaPredicted RBP27.59■■■□□ 2.01
GHDC-212ENST00000593209 ZNF316A6NFI3 1004 aaPredicted RBP27.58■■■□□ 2.01
GHDC-212ENST00000593209 ADGRL2O95490 1459 aa27.58■■■□□ 2.01
GHDC-212ENST00000593209 EFCAB2Q5VUJ9 269 aa27.56■■■□□ 2
GHDC-212ENST00000593209 ARHGEF5Q12774 1597 aa27.54■■■□□ 2
GHDC-212ENST00000593209 SIN3AQ96ST3 1273 aa27.54■■■□□ 2
GHDC-212ENST00000593209 COL17A1Q9UMD9 1497 aaPredicted RBP27.54■■■□□ 2
GHDC-212ENST00000593209 SHANK2Q9UPX8 1470 aa27.52■■■□□ 2
GHDC-212ENST00000593209 CFAP74Q9C0B2 1584 aa27.51■■■□□ 2
GHDC-212ENST00000593209 NEO1Q92859 1461 aa27.51■■■□□ 2
GHDC-212ENST00000593209 HNRNPMP52272 730 aaKnown RBP eCLIP27.5■■□□□ 1.99
GHDC-212ENST00000593209 NCOA1Q15788 1441 aa27.5■■□□□ 1.99
GHDC-212ENST00000593209 MBD5Q9P267 1494 aa27.49■■□□□ 1.99
GHDC-212ENST00000593209 SYCP2Q9BX26 1530 aa27.48■■□□□ 1.99
GHDC-212ENST00000593209 ARHGEF12Q9NZN5 1544 aa27.48■■□□□ 1.99
GHDC-212ENST00000593209 ABCC1P33527 1531 aa27.46■■□□□ 1.99
GHDC-212ENST00000593209 KIAA1107Q9UPP5 1409 aa27.46■■□□□ 1.99
GHDC-212ENST00000593209 PLEKHH2Q8IVE3 1493 aa27.45■■□□□ 1.99
GHDC-212ENST00000593209 ADGRL1O94910 1474 aa27.45■■□□□ 1.98
GHDC-212ENST00000593209 RAPGEF3O95398 923 aa27.43■■□□□ 1.98
GHDC-212ENST00000593209 C9orf84Q5VXU9 1444 aa27.42■■□□□ 1.98
GHDC-212ENST00000593209 NEUROD1Q13562 356 aa27.41■■□□□ 1.98
GHDC-212ENST00000593209 DIEXFQ68CQ4 756 aaKnown RBP27.41■■□□□ 1.98
GHDC-212ENST00000593209 SCAPERQ9BY12 1400 aa27.4■■□□□ 1.98
GHDC-212ENST00000593209 CCDC141Q6ZP82 1450 aa27.38■■□□□ 1.97
GHDC-212ENST00000593209 FRMPD1Q5SYB0 1578 aa27.37■■□□□ 1.97
GHDC-212ENST00000593209 TRAPPC8Q9Y2L5 1435 aa27.37■■□□□ 1.97
GHDC-212ENST00000593209 ANKRD30AQ9BXX3 1397 aa27.37■■□□□ 1.97
GHDC-212ENST00000593209 RSPH4AQ5TD94 716 aa27.37■■□□□ 1.97
GHDC-212ENST00000593209 RICTORQ6R327 1708 aa27.36■■□□□ 1.97
GHDC-212ENST00000593209 MAST1Q9Y2H9 1570 aa27.36■■□□□ 1.97
GHDC-212ENST00000593209 TIMELESSQ9UNS1 1208 aa27.36■■□□□ 1.97
GHDC-212ENST00000593209 TRIM52Q96A61 297 aa27.35■■□□□ 1.97
GHDC-212ENST00000593209 PZPP20742 1482 aa27.35■■□□□ 1.97
GHDC-212ENST00000593209 TSPY4P0CV99 314 aa27.32■■□□□ 1.96
GHDC-212ENST00000593209 TSPY10P0CW01 314 aa27.32■■□□□ 1.96
GHDC-212ENST00000593209 MPHOSPH9Q99550 1183 aa27.32■■□□□ 1.96
GHDC-212ENST00000593209 AFAP1Q8N556 730 aa27.32■■□□□ 1.96
GHDC-212ENST00000593209 POGZQ7Z3K3 1410 aa27.31■■□□□ 1.96
GHDC-212ENST00000593209 ACIN1Q9UKV3 1341 aaKnown RBP27.29■■□□□ 1.96
GHDC-212ENST00000593209 ANKRD50Q9ULJ7 1429 aa27.29■■□□□ 1.96
GHDC-212ENST00000593209 PLXNC1O60486 1568 aa27.26■■□□□ 1.95
GHDC-212ENST00000593209 KDM5DQ9BY66 1539 aa27.25■■□□□ 1.95
GHDC-212ENST00000593209 ZNF518AQ6AHZ1 1483 aa27.25■■□□□ 1.95
GHDC-212ENST00000593209 TONSLQ96HA7 1378 aa27.24■■□□□ 1.95
GHDC-212ENST00000593209 PPP1R15AO75807 674 aaPredicted RBP27.24■■□□□ 1.95
GHDC-212ENST00000593209 KIF15Q9NS87 1388 aa27.23■■□□□ 1.95
GHDC-212ENST00000593209 ANKRD30BQ9BXX2 1392 aa27.22■■□□□ 1.95
GHDC-212ENST00000593209 FOXD1Q16676 465 aa27.21■■□□□ 1.95
GHDC-212ENST00000593209 SPAG9O60271 1321 aaKnown RBP27.21■■□□□ 1.95
GHDC-212ENST00000593209 MYT1LQ9UL68 1186 aa27.2■■□□□ 1.95
GHDC-212ENST00000593209 KDM5CP41229 1560 aa27.2■■□□□ 1.95
GHDC-212ENST00000593209 ZMYM4Q5VZL5 1548 aa27.2■■□□□ 1.94
GHDC-212ENST00000593209 ZFYVE16Q7Z3T8 1539 aa27.18■■□□□ 1.94
GHDC-212ENST00000593209 INO80Q9ULG1 1556 aaPredicted RBP27.18■■□□□ 1.94
GHDC-212ENST00000593209 RTEL1-TNFRSF6BF6WH68 1400 aa27.17■■□□□ 1.94
GHDC-212ENST00000593209 YEATS2Q9ULM3 1422 aa27.17■■□□□ 1.94
GHDC-212ENST00000593209 KIDINS220Q9ULH0 1771 aa27.16■■□□□ 1.94
GHDC-212ENST00000593209 HECW2Q9P2P5 1572 aa27.16■■□□□ 1.94
GHDC-212ENST00000593209 RPRD2Q5VT52 1461 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms