RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 DAPK1P53355 1430 aa19.06■□□□□ 0.64
CACNA1A-212ENST00000593160 AKNAQ7Z591 1439 aa19.05■□□□□ 0.64
CACNA1A-212ENST00000593160 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
CACNA1A-212ENST00000593160 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
CACNA1A-212ENST00000593160 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
CACNA1A-212ENST00000593160 ZNF644Q9H582 1327 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-212ENST00000593160 WDR7Q9Y4E6 1490 aa19.04■□□□□ 0.64
CACNA1A-212ENST00000593160 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-212ENST00000593160 DHX57Q6P158 1386 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-212ENST00000593160 ABCC5O15440 1437 aa19.03■□□□□ 0.64
CACNA1A-212ENST00000593160 SAMD9LQ8IVG5 1584 aa19.03■□□□□ 0.64
CACNA1A-212ENST00000593160 NAIPQ13075 1403 aa19.02■□□□□ 0.63
CACNA1A-212ENST00000593160 ADGBQ8N7X0 1667 aa19■□□□□ 0.63
CACNA1A-212ENST00000593160 ARHGEF5Q12774 1597 aa18.99■□□□□ 0.63
CACNA1A-212ENST00000593160 ABCA9Q8IUA7 1624 aa18.98■□□□□ 0.63
CACNA1A-212ENST00000593160 ASXL2Q76L83 1435 aa18.97■□□□□ 0.63
CACNA1A-212ENST00000593160 ARHGAP5Q13017 1502 aa18.97■□□□□ 0.63
CACNA1A-212ENST00000593160 ROCK1Q13464 1354 aa18.97■□□□□ 0.63
CACNA1A-212ENST00000593160 ARAP3Q8WWN8 1544 aa18.96■□□□□ 0.63
CACNA1A-212ENST00000593160 SHANK2Q9UPX8 1470 aa18.96■□□□□ 0.63
CACNA1A-212ENST00000593160 ADGRL2O95490 1459 aa18.95■□□□□ 0.62
CACNA1A-212ENST00000593160 PLCH2O75038 1416 aa18.94■□□□□ 0.62
CACNA1A-212ENST00000593160 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-212ENST00000593160 MBD5Q9P267 1494 aa18.94■□□□□ 0.62
CACNA1A-212ENST00000593160 KDM6BO15054 1643 aa18.93■□□□□ 0.62
CACNA1A-212ENST00000593160 KCNH8Q96L42 1107 aa18.93■□□□□ 0.62
CACNA1A-212ENST00000593160 MAPKBP1O60336 1514 aa18.92■□□□□ 0.62
CACNA1A-212ENST00000593160 SYCP2Q9BX26 1530 aa18.92■□□□□ 0.62
CACNA1A-212ENST00000593160 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
CACNA1A-212ENST00000593160 CLSPNQ9HAW4 1339 aa18.91■□□□□ 0.62
CACNA1A-212ENST00000593160 ABCC1P33527 1531 aa18.9■□□□□ 0.62
CACNA1A-212ENST00000593160 CCDC141Q6ZP82 1450 aa18.89■□□□□ 0.61
CACNA1A-212ENST00000593160 PLEKHH2Q8IVE3 1493 aa18.89■□□□□ 0.61
CACNA1A-212ENST00000593160 RRP7BPQ9NSQ0 103 aa18.88■□□□□ 0.61
CACNA1A-212ENST00000593160 MAST1Q9Y2H9 1570 aa18.87■□□□□ 0.61
CACNA1A-212ENST00000593160 KIAA1107Q9UPP5 1409 aa18.87■□□□□ 0.61
CACNA1A-212ENST00000593160 NCOA1Q15788 1441 aa18.87■□□□□ 0.61
CACNA1A-212ENST00000593160 C9orf84Q5VXU9 1444 aa18.87■□□□□ 0.61
CACNA1A-212ENST00000593160 NPM1P06748 294 aaKnown RBP eCLIP18.86■□□□□ 0.61
CACNA1A-212ENST00000593160 ARHGEF12Q9NZN5 1544 aa18.85■□□□□ 0.61
CACNA1A-212ENST00000593160 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
CACNA1A-212ENST00000593160 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
CACNA1A-212ENST00000593160 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
CACNA1A-212ENST00000593160 EFCAB2Q5VUJ9 269 aa18.8■□□□□ 0.6
CACNA1A-212ENST00000593160 PLXNC1O60486 1568 aa18.8■□□□□ 0.6
CACNA1A-212ENST00000593160 FANCAO15360 1455 aa18.8■□□□□ 0.6
CACNA1A-212ENST00000593160 RSPH4AQ5TD94 716 aa18.79■□□□□ 0.6
CACNA1A-212ENST00000593160 CFAP74Q9C0B2 1584 aa18.77■□□□□ 0.6
CACNA1A-212ENST00000593160 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.59
CACNA1A-212ENST00000593160 TRAPPC8Q9Y2L5 1435 aa18.75■□□□□ 0.59
CACNA1A-212ENST00000593160 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
CACNA1A-212ENST00000593160 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
CACNA1A-212ENST00000593160 MAP3K4Q9Y6R4 1608 aa18.75■□□□□ 0.59
CACNA1A-212ENST00000593160 GLI2P10070 1586 aa18.74■□□□□ 0.59
CACNA1A-212ENST00000593160 ANKRD50Q9ULJ7 1429 aa18.74■□□□□ 0.59
CACNA1A-212ENST00000593160 KIF15Q9NS87 1388 aa18.73■□□□□ 0.59
CACNA1A-212ENST00000593160 ZFYVE16Q7Z3T8 1539 aa18.72■□□□□ 0.59
CACNA1A-212ENST00000593160 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
CACNA1A-212ENST00000593160 ACIN1Q9UKV3 1341 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-212ENST00000593160 DIP2BQ9P265 1576 aa18.72■□□□□ 0.59
CACNA1A-212ENST00000593160 ADGRL1O94910 1474 aa18.72■□□□□ 0.59
CACNA1A-212ENST00000593160 INO80Q9ULG1 1556 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-212ENST00000593160 KDM5DQ9BY66 1539 aa18.69■□□□□ 0.58
CACNA1A-212ENST00000593160 PZPP20742 1482 aa18.69■□□□□ 0.58
CACNA1A-212ENST00000593160 RTEL1-TNFRSF6BF6WH68 1400 aa18.67■□□□□ 0.58
CACNA1A-212ENST00000593160 DUOX2Q9NRD8 1548 aa18.67■□□□□ 0.58
CACNA1A-212ENST00000593160 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
CACNA1A-212ENST00000593160 UNC13BO14795 1591 aa18.66■□□□□ 0.58
CACNA1A-212ENST00000593160 TRIM52Q96A61 297 aa18.66■□□□□ 0.58
CACNA1A-212ENST00000593160 NEO1Q92859 1461 aa18.65■□□□□ 0.58
CACNA1A-212ENST00000593160 ATP7AQ04656 1500 aa18.65■□□□□ 0.58
CACNA1A-212ENST00000593160 KDM5CP41229 1560 aa18.64■□□□□ 0.57
CACNA1A-212ENST00000593160 MPHOSPH9Q99550 1183 aa18.63■□□□□ 0.57
CACNA1A-212ENST00000593160 ERBINQ96RT1 1412 aa18.63■□□□□ 0.57
CACNA1A-212ENST00000593160 ZNF518AQ6AHZ1 1483 aa18.62■□□□□ 0.57
CACNA1A-212ENST00000593160 POGZQ7Z3K3 1410 aa18.61■□□□□ 0.57
CACNA1A-212ENST00000593160 KIDINS220Q9ULH0 1771 aa18.61■□□□□ 0.57
CACNA1A-212ENST00000593160 AFAP1Q8N556 730 aa18.61■□□□□ 0.57
CACNA1A-212ENST00000593160 PPRC1Q5VV67 1664 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-212ENST00000593160 SPAG9O60271 1321 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-212ENST00000593160 SIN3AQ96ST3 1273 aa18.6■□□□□ 0.57
CACNA1A-212ENST00000593160 MAGI2Q86UL8 1455 aa18.6■□□□□ 0.57
CACNA1A-212ENST00000593160 KIF13AQ9H1H9 1805 aa18.6■□□□□ 0.57
CACNA1A-212ENST00000593160 RICTORQ6R327 1708 aa18.57■□□□□ 0.56
CACNA1A-212ENST00000593160 IQGAP3Q86VI3 1631 aa18.57■□□□□ 0.56
CACNA1A-212ENST00000593160 HECW2Q9P2P5 1572 aa18.57■□□□□ 0.56
CACNA1A-212ENST00000593160 FAM135AQ9P2D6 1515 aa18.56■□□□□ 0.56
CACNA1A-212ENST00000593160 DEPDC5O75140 1603 aa18.56■□□□□ 0.56
CACNA1A-212ENST00000593160 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-212ENST00000593160 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-212ENST00000593160 NUP155O75694 1391 aa18.55■□□□□ 0.56
CACNA1A-212ENST00000593160 ANKRD30BQ9BXX2 1392 aa18.55■□□□□ 0.56
CACNA1A-212ENST00000593160 MLH3Q9UHC1 1453 aa18.54■□□□□ 0.56
CACNA1A-212ENST00000593160 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
CACNA1A-212ENST00000593160 TIMELESSQ9UNS1 1208 aa18.54■□□□□ 0.56
CACNA1A-212ENST00000593160 TSPOAP1O95153 1857 aa18.53■□□□□ 0.56
CACNA1A-212ENST00000593160 FRMPD1Q5SYB0 1578 aa18.53■□□□□ 0.56
CACNA1A-212ENST00000593160 ABCA6Q8N139 1617 aa18.52■□□□□ 0.56
CACNA1A-212ENST00000593160 FAM69CQ0P6D2 419 aa18.52■□□□□ 0.56
CACNA1A-212ENST00000593160 FOXD1Q16676 465 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms