RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 EFCAB2Q5VUJ9 269 aa15.09■□□□□ 0.01
DDX39A-220ENST00000593008 FRMPD1Q5SYB0 1578 aa15.08■□□□□ 0
DDX39A-220ENST00000593008 SCAPERQ9BY12 1400 aa15.08■□□□□ 0
DDX39A-220ENST00000593008 ADGRL1O94910 1474 aa15.08■□□□□ 0
DDX39A-220ENST00000593008 NCOA2Q15596 1464 aa15.08■□□□□ 0
DDX39A-220ENST00000593008 ARHGAP5Q13017 1502 aa15.07■□□□□ 0
DDX39A-220ENST00000593008 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
DDX39A-220ENST00000593008 APLP2Q06481 763 aa15.07■□□□□ 0
DDX39A-220ENST00000593008 MYO5CQ9NQX4 1742 aa15.06■□□□□ 0
DDX39A-220ENST00000593008 SUPT6HQ7KZ85 1726 aaKnown RBP15.04■□□□□ -0
DDX39A-220ENST00000593008 ZNF777Q9ULD5 760 aaPredicted RBP15.03■□□□□ -0
DDX39A-220ENST00000593008 POGZQ7Z3K3 1410 aa15.02■□□□□ -0
DDX39A-220ENST00000593008 RICTORQ6R327 1708 aa15.02□□□□□ -0.01
DDX39A-220ENST00000593008 ARID4BQ4LE39 1312 aaPredicted RBP15.01□□□□□ -0.01
DDX39A-220ENST00000593008 AFAP1Q8N556 730 aa15.01□□□□□ -0.01
DDX39A-220ENST00000593008 CDC42BPAQ5VT25 1732 aa15□□□□□ -0.01
DDX39A-220ENST00000593008 CDC42BPBQ9Y5S2 1711 aa15□□□□□ -0.01
DDX39A-220ENST00000593008 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
DDX39A-220ENST00000593008 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
DDX39A-220ENST00000593008 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
DDX39A-220ENST00000593008 GPATCH8Q9UKJ3 1502 aaKnown RBP14.99□□□□□ -0.01
DDX39A-220ENST00000593008 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
DDX39A-220ENST00000593008 MYT1LQ9UL68 1186 aa14.98□□□□□ -0.01
DDX39A-220ENST00000593008 ZMYM4Q5VZL5 1548 aa14.97□□□□□ -0.01
DDX39A-220ENST00000593008 ZFYVE16Q7Z3T8 1539 aa14.97□□□□□ -0.01
DDX39A-220ENST00000593008 ARHGEF40Q8TER5 1519 aa14.97□□□□□ -0.01
DDX39A-220ENST00000593008 ARHGEF12Q9NZN5 1544 aa14.97□□□□□ -0.01
DDX39A-220ENST00000593008 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
DDX39A-220ENST00000593008 ZNF518AQ6AHZ1 1483 aa14.95□□□□□ -0.02
DDX39A-220ENST00000593008 ABCC1P33527 1531 aa14.95□□□□□ -0.02
DDX39A-220ENST00000593008 MAGI2Q86UL8 1455 aa14.95□□□□□ -0.02
DDX39A-220ENST00000593008 MYOM3Q5VTT5 1437 aa14.94□□□□□ -0.02
DDX39A-220ENST00000593008 HNRNPMP52272 730 aaKnown RBP eCLIP14.94□□□□□ -0.024e-15■■■■□ 20.6
DDX39A-220ENST00000593008 ZNF644Q9H582 1327 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-220ENST00000593008 SAMD9LQ8IVG5 1584 aa14.93□□□□□ -0.02
DDX39A-220ENST00000593008 ITSN2Q9NZM3 1697 aa14.93□□□□□ -0.02
DDX39A-220ENST00000593008 MLECQ14165 292 aa14.92□□□□□ -0.02
DDX39A-220ENST00000593008 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
DDX39A-220ENST00000593008 FGD6Q6ZV73 1430 aa14.91□□□□□ -0.02
DDX39A-220ENST00000593008 KDM5CP41229 1560 aa14.9□□□□□ -0.02
DDX39A-220ENST00000593008 ATP10AO60312 1499 aa14.9□□□□□ -0.02
DDX39A-220ENST00000593008 CAMSAP2Q08AD1 1489 aa14.89□□□□□ -0.03
DDX39A-220ENST00000593008 SIGLEC1Q9BZZ2 1709 aa14.89□□□□□ -0.03
DDX39A-220ENST00000593008 PTPN23Q9H3S7 1636 aa14.88□□□□□ -0.03
DDX39A-220ENST00000593008 C9orf84Q5VXU9 1444 aa14.88□□□□□ -0.03
DDX39A-220ENST00000593008 HECW2Q9P2P5 1572 aa14.88□□□□□ -0.03
DDX39A-220ENST00000593008 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
DDX39A-220ENST00000593008 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
DDX39A-220ENST00000593008 MLH3Q9UHC1 1453 aa14.87□□□□□ -0.03
DDX39A-220ENST00000593008 SPAG9O60271 1321 aaKnown RBP14.87□□□□□ -0.03
DDX39A-220ENST00000593008 BCORL1Q5H9F3 1711 aa14.86□□□□□ -0.03
DDX39A-220ENST00000593008 PLEKHH2Q8IVE3 1493 aa14.86□□□□□ -0.03
DDX39A-220ENST00000593008 ADAMTSL3P82987 1691 aa14.86□□□□□ -0.03
DDX39A-220ENST00000593008 DIP2CQ9Y2E4 1556 aa14.85□□□□□ -0.03
DDX39A-220ENST00000593008 ABCA6Q8N139 1617 aa14.84□□□□□ -0.03
DDX39A-220ENST00000593008 MADDQ8WXG6 1647 aa14.84□□□□□ -0.03
DDX39A-220ENST00000593008 RRBP1Q9P2E9 1410 aaKnown RBP14.84□□□□□ -0.03
DDX39A-220ENST00000593008 PTPRMP28827 1452 aa14.84□□□□□ -0.03
DDX39A-220ENST00000593008 TCOF1Q13428 1488 aaKnown RBP14.84□□□□□ -0.03
DDX39A-220ENST00000593008 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
DDX39A-220ENST00000593008 FAM50AQ14320 339 aaKnown RBP14.82□□□□□ -0.04
DDX39A-220ENST00000593008 MBD5Q9P267 1494 aa14.82□□□□□ -0.04
DDX39A-220ENST00000593008 KIDINS220Q9ULH0 1771 aa14.81□□□□□ -0.04
DDX39A-220ENST00000593008 RIMS1Q86UR5 1692 aaKnown RBP14.8□□□□□ -0.04
DDX39A-220ENST00000593008 ATP7AQ04656 1500 aa14.79□□□□□ -0.04
DDX39A-220ENST00000593008 PTPRKQ15262 1439 aa14.79□□□□□ -0.04
DDX39A-220ENST00000593008 ABCC5O15440 1437 aa14.77□□□□□ -0.04
DDX39A-220ENST00000593008 ITGAEP38570 1179 aa14.77□□□□□ -0.05
DDX39A-220ENST00000593008 DNMT1P26358 1616 aaKnown RBP14.77□□□□□ -0.05
DDX39A-220ENST00000593008 INO80Q9ULG1 1556 aaPredicted RBP14.77□□□□□ -0.05
DDX39A-220ENST00000593008 CEBPAP49715 358 aaPredicted RBP14.76□□□□□ -0.05
DDX39A-220ENST00000593008 CROCC2H7BZ55 1655 aa14.76□□□□□ -0.05
DDX39A-220ENST00000593008 ARHGEF5Q12774 1597 aa14.76□□□□□ -0.05
DDX39A-220ENST00000593008 REREQ9P2R6 1566 aa14.76□□□□□ -0.05
DDX39A-220ENST00000593008 CCDC141Q6ZP82 1450 aa14.76□□□□□ -0.05
DDX39A-220ENST00000593008 DAPK1P53355 1430 aa14.75□□□□□ -0.05
DDX39A-220ENST00000593008 A2MP01023 1474 aa14.75□□□□□ -0.05
DDX39A-220ENST00000593008 AGLP35573 1532 aa14.74□□□□□ -0.05
DDX39A-220ENST00000593008 FER1L4A9Z1Z3 1794 aa14.73□□□□□ -0.05
DDX39A-220ENST00000593008 TSPY4P0CV99 314 aa14.73□□□□□ -0.05
DDX39A-220ENST00000593008 TSPY10P0CW01 314 aa14.73□□□□□ -0.05
DDX39A-220ENST00000593008 RSPH4AQ5TD94 716 aa14.73□□□□□ -0.05
DDX39A-220ENST00000593008 ESF1Q9H501 851 aaKnown RBP14.73□□□□□ -0.05
DDX39A-220ENST00000593008 RTEL1-TNFRSF6BF6WH68 1400 aa14.72□□□□□ -0.05
DDX39A-220ENST00000593008 GGT6Q6P531 493 aa14.71□□□□□ -0.05
DDX39A-220ENST00000593008 CHIC2Q9UKJ5 165 aa14.71□□□□□ -0.05
DDX39A-220ENST00000593008 PLXNC1O60486 1568 aa14.69□□□□□ -0.06
DDX39A-220ENST00000593008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.064e-9■□□□□ 10.2
DDX39A-220ENST00000593008 DHX29Q7Z478 1369 aaKnown RBP14.68□□□□□ -0.06
DDX39A-220ENST00000593008 SHANK2Q9UPX8 1470 aa14.68□□□□□ -0.06
DDX39A-220ENST00000593008 KIF3BO15066 747 aa14.67□□□□□ -0.06
DDX39A-220ENST00000593008 MAST1Q9Y2H9 1570 aa14.67□□□□□ -0.06
DDX39A-220ENST00000593008 ADGBQ8N7X0 1667 aa14.66□□□□□ -0.06
DDX39A-220ENST00000593008 LMTK3Q96Q04 1460 aa14.66□□□□□ -0.06
DDX39A-220ENST00000593008 HSPA2P54652 639 aa14.66□□□□□ -0.06
DDX39A-220ENST00000593008 TRIM26Q12899 539 aaPredicted RBP14.63□□□□□ -0.07
DDX39A-220ENST00000593008 RRP7BPQ9NSQ0 103 aa14.63□□□□□ -0.07
DDX39A-220ENST00000593008 CNTLNQ9NXG0 1405 aa14.63□□□□□ -0.07
DDX39A-220ENST00000593008 ADGRL2O95490 1459 aa14.63□□□□□ -0.07
DDX39A-220ENST00000593008 ZMYM3Q14202 1370 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms