RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 MAGI2Q86UL8 1455 aa26.03■■□□□ 1.76
CIRBP-240ENST00000592815 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
CIRBP-240ENST00000592815 CCDC18Q5T9S5 1454 aa26.02■■□□□ 1.76
CIRBP-240ENST00000592815 ZFYVE16Q7Z3T8 1539 aa26.02■■□□□ 1.76
CIRBP-240ENST00000592815 PCF11O94913 1555 aaKnown RBP26.02■■□□□ 1.76
CIRBP-240ENST00000592815 MYO5CQ9NQX4 1742 aa26.01■■□□□ 1.75
CIRBP-240ENST00000592815 BCORL1Q5H9F3 1711 aa26■■□□□ 1.75
CIRBP-240ENST00000592815 ARHGAP5Q13017 1502 aa26■■□□□ 1.75
CIRBP-240ENST00000592815 AFAP1Q8N556 730 aa25.99■■□□□ 1.75
CIRBP-240ENST00000592815 MLECQ14165 292 aa25.98■■□□□ 1.75
CIRBP-240ENST00000592815 FYCO1Q9BQS8 1478 aa25.97■■□□□ 1.75
CIRBP-240ENST00000592815 MYT1LQ9UL68 1186 aa25.95■■□□□ 1.74
CIRBP-240ENST00000592815 MADDQ8WXG6 1647 aa25.95■■□□□ 1.74
CIRBP-240ENST00000592815 PLPPR3Q6T4P5 718 aa25.93■■□□□ 1.74
CIRBP-240ENST00000592815 ATP10AO60312 1499 aa25.92■■□□□ 1.74
CIRBP-240ENST00000592815 ZNF518AQ6AHZ1 1483 aa25.91■■□□□ 1.74
CIRBP-240ENST00000592815 ZNF777Q9ULD5 760 aaPredicted RBP25.87■■□□□ 1.73
CIRBP-240ENST00000592815 SIGLEC1Q9BZZ2 1709 aa25.87■■□□□ 1.73
CIRBP-240ENST00000592815 C9orf84Q5VXU9 1444 aa25.87■■□□□ 1.73
CIRBP-240ENST00000592815 CDC42BPBQ9Y5S2 1711 aa25.86■■□□□ 1.73
CIRBP-240ENST00000592815 RIMS1Q86UR5 1692 aaKnown RBP25.85■■□□□ 1.73
CIRBP-240ENST00000592815 TRAPPC8Q9Y2L5 1435 aa25.83■■□□□ 1.73
CIRBP-240ENST00000592815 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.72
CIRBP-240ENST00000592815 PREX2Q70Z35 1606 aa25.82■■□□□ 1.72
CIRBP-240ENST00000592815 ILDR1Q86SU0 546 aaPredicted RBP25.82■■□□□ 1.72
CIRBP-240ENST00000592815 KDM5CP41229 1560 aa25.82■■□□□ 1.72
CIRBP-240ENST00000592815 MTUS2Q5JR59 1369 aa25.79■■□□□ 1.72
CIRBP-240ENST00000592815 CEP162Q5TB80 1403 aa25.79■■□□□ 1.72
CIRBP-240ENST00000592815 MLH3Q9UHC1 1453 aa25.79■■□□□ 1.72
CIRBP-240ENST00000592815 GPATCH8Q9UKJ3 1502 aaKnown RBP25.78■■□□□ 1.72
CIRBP-240ENST00000592815 ABCC1P33527 1531 aa25.78■■□□□ 1.72
CIRBP-240ENST00000592815 CFDP1Q9UEE9 299 aaPredicted RBP25.77■■□□□ 1.72
CIRBP-240ENST00000592815 HNRNPMP52272 730 aaKnown RBP eCLIP25.76■■□□□ 1.71
CIRBP-240ENST00000592815 CDC42BPAQ5VT25 1732 aa25.75■■□□□ 1.71
CIRBP-240ENST00000592815 LMTK3Q96Q04 1460 aa25.75■■□□□ 1.71
CIRBP-240ENST00000592815 CCNB3Q8WWL7 1395 aa25.75■■□□□ 1.71
CIRBP-240ENST00000592815 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
CIRBP-240ENST00000592815 CEBPAP49715 358 aaPredicted RBP25.74■■□□□ 1.71
CIRBP-240ENST00000592815 HSPA2P54652 639 aa25.74■■□□□ 1.71
CIRBP-240ENST00000592815 DIP2CQ9Y2E4 1556 aa25.73■■□□□ 1.71
CIRBP-240ENST00000592815 FER1L4A9Z1Z3 1794 aa25.7■■□□□ 1.7
CIRBP-240ENST00000592815 ITSN2Q9NZM3 1697 aa25.7■■□□□ 1.7
CIRBP-240ENST00000592815 SPAG9O60271 1321 aaKnown RBP25.69■■□□□ 1.7
CIRBP-240ENST00000592815 SAMD9LQ8IVG5 1584 aa25.68■■□□□ 1.7
CIRBP-240ENST00000592815 ABCA6Q8N139 1617 aa25.67■■□□□ 1.7
CIRBP-240ENST00000592815 ESF1Q9H501 851 aaKnown RBP25.66■■□□□ 1.7
CIRBP-240ENST00000592815 REREQ9P2R6 1566 aa25.65■■□□□ 1.7
CIRBP-240ENST00000592815 KIAA1107Q9UPP5 1409 aa25.65■■□□□ 1.7
CIRBP-240ENST00000592815 SYCP2Q9BX26 1530 aa25.65■■□□□ 1.7
CIRBP-240ENST00000592815 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
CIRBP-240ENST00000592815 PLEKHH2Q8IVE3 1493 aa25.63■■□□□ 1.69
CIRBP-240ENST00000592815 KIDINS220Q9ULH0 1771 aa25.63■■□□□ 1.69
CIRBP-240ENST00000592815 AGLP35573 1532 aa25.62■■□□□ 1.69
CIRBP-240ENST00000592815 EHBP1L1Q8N3D4 1523 aa25.6■■□□□ 1.69
CIRBP-240ENST00000592815 TIAM1Q13009 1591 aa25.55■■□□□ 1.68
CIRBP-240ENST00000592815 ATP7AQ04656 1500 aa25.53■■□□□ 1.68
CIRBP-240ENST00000592815 NCOA2Q15596 1464 aa25.5■■□□□ 1.67
CIRBP-240ENST00000592815 VPS8Q8N3P4 1428 aa25.5■■□□□ 1.67
CIRBP-240ENST00000592815 FBXO41Q8TF61 875 aa25.5■■□□□ 1.67
CIRBP-240ENST00000592815 MBD5Q9P267 1494 aa25.5■■□□□ 1.67
CIRBP-240ENST00000592815 A2MP01023 1474 aa25.49■■□□□ 1.67
CIRBP-240ENST00000592815 UHRF1BP1Q6BDS2 1440 aa25.49■■□□□ 1.67
CIRBP-240ENST00000592815 CNTLNQ9NXG0 1405 aa25.49■■□□□ 1.67
CIRBP-240ENST00000592815 GGT6Q6P531 493 aa25.48■■□□□ 1.67
CIRBP-240ENST00000592815 PREX1Q8TCU6 1659 aa25.47■■□□□ 1.67
CIRBP-240ENST00000592815 INO80Q9ULG1 1556 aaPredicted RBP25.46■■□□□ 1.67
CIRBP-240ENST00000592815 SETD1BQ9UPS6 1966 aaKnown RBP25.45■■□□□ 1.67
CIRBP-240ENST00000592815 ZMYM3Q14202 1370 aa25.44■■□□□ 1.66
CIRBP-240ENST00000592815 SUPT6HQ7KZ85 1726 aaKnown RBP25.44■■□□□ 1.66
CIRBP-240ENST00000592815 RSPH4AQ5TD94 716 aa25.44■■□□□ 1.66
CIRBP-240ENST00000592815 C3P01024 1663 aa25.44■■□□□ 1.66
CIRBP-240ENST00000592815 KANK4Q5T7N3 995 aaPredicted RBP25.43■■□□□ 1.66
CIRBP-240ENST00000592815 RTEL1-TNFRSF6BF6WH68 1400 aa25.42■■□□□ 1.66
CIRBP-240ENST00000592815 LRRC9Q6ZRR7 1453 aa25.41■■□□□ 1.66
CIRBP-240ENST00000592815 DMRT2Q9Y5R5 561 aa25.41■■□□□ 1.66
CIRBP-240ENST00000592815 PLXNC1O60486 1568 aa25.39■■□□□ 1.66
CIRBP-240ENST00000592815 PPP6R1Q9UPN7 881 aa25.39■■□□□ 1.66
CIRBP-240ENST00000592815 CAMSAP2Q08AD1 1489 aa25.39■■□□□ 1.65
CIRBP-240ENST00000592815 DHX29Q7Z478 1369 aaKnown RBP25.38■■□□□ 1.65
CIRBP-240ENST00000592815 CCDC141Q6ZP82 1450 aa25.37■■□□□ 1.65
CIRBP-240ENST00000592815 TSPY4P0CV99 314 aa25.37■■□□□ 1.65
CIRBP-240ENST00000592815 TSPY10P0CW01 314 aa25.37■■□□□ 1.65
CIRBP-240ENST00000592815 CERKQ8TCT0 537 aa25.35■■□□□ 1.65
CIRBP-240ENST00000592815 NPATQ14207 1427 aa25.35■■□□□ 1.65
CIRBP-240ENST00000592815 ADGBQ8N7X0 1667 aa25.34■■□□□ 1.65
CIRBP-240ENST00000592815 KIF3BO15066 747 aa25.34■■□□□ 1.65
CIRBP-240ENST00000592815 MAP3K1Q13233 1512 aa25.32■■□□□ 1.64
CIRBP-240ENST00000592815 APLP2Q06481 763 aa25.31■■□□□ 1.64
CIRBP-240ENST00000592815 MROH2AA6NES4 1674 aa25.31■■□□□ 1.64
CIRBP-240ENST00000592815 CLTCQ00610 1675 aaKnown RBP25.29■■□□□ 1.64
CIRBP-240ENST00000592815 STRCQ7RTU9 1775 aa25.29■■□□□ 1.64
CIRBP-240ENST00000592815 PTPRKQ15262 1439 aa25.28■■□□□ 1.64
CIRBP-240ENST00000592815 ARHGEF5Q12774 1597 aa25.26■■□□□ 1.63
CIRBP-240ENST00000592815 PTPRTO14522 1441 aa25.24■■□□□ 1.63
CIRBP-240ENST00000592815 MYOM3Q5VTT5 1437 aa25.24■■□□□ 1.63
CIRBP-240ENST00000592815 WASHC2CQ9Y4E1 1318 aa25.24■■□□□ 1.63
CIRBP-240ENST00000592815 NCOA1Q15788 1441 aa25.22■■□□□ 1.63
CIRBP-240ENST00000592815 MIA2Q96PC5 1412 aa25.22■■□□□ 1.63
CIRBP-240ENST00000592815 NCKAP5LQ9HCH0 1330 aa25.21■■□□□ 1.63
CIRBP-240ENST00000592815 FBXO31Q5XUX0 539 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms