RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 GPATCH8Q9UKJ3 1502 aaKnown RBP20.51■□□□□ 0.87
DDX39A-218ENST00000592632 ARHGAP5Q13017 1502 aa20.5■□□□□ 0.87
DDX39A-218ENST00000592632 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
DDX39A-218ENST00000592632 SCAPERQ9BY12 1400 aa20.5■□□□□ 0.87
DDX39A-218ENST00000592632 MAP3K1Q13233 1512 aa20.49■□□□□ 0.87
DDX39A-218ENST00000592632 CDC42BPAQ5VT25 1732 aa20.49■□□□□ 0.87
DDX39A-218ENST00000592632 EHBP1L1Q8N3D4 1523 aa20.48■□□□□ 0.87
DDX39A-218ENST00000592632 FRMPD1Q5SYB0 1578 aa20.47■□□□□ 0.87
DDX39A-218ENST00000592632 PREX2Q70Z35 1606 aa20.47■□□□□ 0.87
DDX39A-218ENST00000592632 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
DDX39A-218ENST00000592632 LRRC9Q6ZRR7 1453 aa20.46■□□□□ 0.87
DDX39A-218ENST00000592632 RICTORQ6R327 1708 aa20.46■□□□□ 0.87
DDX39A-218ENST00000592632 CFDP1Q9UEE9 299 aaPredicted RBP20.45■□□□□ 0.86
DDX39A-218ENST00000592632 ZNF777Q9ULD5 760 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-218ENST00000592632 APLP2Q06481 763 aa20.43■□□□□ 0.86
DDX39A-218ENST00000592632 AFAP1Q8N556 730 aa20.43■□□□□ 0.86
DDX39A-218ENST00000592632 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
DDX39A-218ENST00000592632 POGZQ7Z3K3 1410 aa20.42■□□□□ 0.86
DDX39A-218ENST00000592632 ARHGEF12Q9NZN5 1544 aa20.41■□□□□ 0.86
DDX39A-218ENST00000592632 HECW2Q9P2P5 1572 aa20.4■□□□□ 0.86
DDX39A-218ENST00000592632 SUPT6HQ7KZ85 1726 aaKnown RBP20.39■□□□□ 0.86
DDX39A-218ENST00000592632 ZNF644Q9H582 1327 aaPredicted RBP20.38■□□□□ 0.85
DDX39A-218ENST00000592632 HNRNPMP52272 730 aaKnown RBP eCLIP20.38■□□□□ 0.854e-15■■■■□ 20.6
DDX39A-218ENST00000592632 TRAPPC8Q9Y2L5 1435 aa20.37■□□□□ 0.85
DDX39A-218ENST00000592632 SAMD9LQ8IVG5 1584 aa20.37■□□□□ 0.85
DDX39A-218ENST00000592632 ABCC1P33527 1531 aa20.37■□□□□ 0.85
DDX39A-218ENST00000592632 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
DDX39A-218ENST00000592632 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
DDX39A-218ENST00000592632 ZNF518AQ6AHZ1 1483 aa20.35■□□□□ 0.85
DDX39A-218ENST00000592632 YEATS2Q9ULM3 1422 aa20.35■□□□□ 0.85
DDX39A-218ENST00000592632 KIAA1107Q9UPP5 1409 aa20.35■□□□□ 0.85
DDX39A-218ENST00000592632 ITSN2Q9NZM3 1697 aa20.32■□□□□ 0.84
DDX39A-218ENST00000592632 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
DDX39A-218ENST00000592632 KDM5CP41229 1560 aa20.31■□□□□ 0.84
DDX39A-218ENST00000592632 ZFYVE16Q7Z3T8 1539 aa20.3■□□□□ 0.84
DDX39A-218ENST00000592632 ARHGEF40Q8TER5 1519 aa20.29■□□□□ 0.84
DDX39A-218ENST00000592632 SYCP2Q9BX26 1530 aa20.29■□□□□ 0.84
DDX39A-218ENST00000592632 MLH3Q9UHC1 1453 aa20.29■□□□□ 0.84
DDX39A-218ENST00000592632 MYT1LQ9UL68 1186 aa20.28■□□□□ 0.84
DDX39A-218ENST00000592632 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
DDX39A-218ENST00000592632 ATP10AO60312 1499 aa20.27■□□□□ 0.84
DDX39A-218ENST00000592632 ILDR1Q86SU0 546 aaPredicted RBP20.26■□□□□ 0.83
DDX39A-218ENST00000592632 MYOM3Q5VTT5 1437 aa20.26■□□□□ 0.83
DDX39A-218ENST00000592632 SPAG9O60271 1321 aaKnown RBP20.26■□□□□ 0.83
DDX39A-218ENST00000592632 ARID4BQ4LE39 1312 aaPredicted RBP20.26■□□□□ 0.83
DDX39A-218ENST00000592632 MIA2Q96PC5 1412 aa20.23■□□□□ 0.83
DDX39A-218ENST00000592632 CAMSAP2Q08AD1 1489 aa20.23■□□□□ 0.83
DDX39A-218ENST00000592632 KIDINS220Q9ULH0 1771 aa20.22■□□□□ 0.83
DDX39A-218ENST00000592632 RSPH4AQ5TD94 716 aa20.22■□□□□ 0.83
DDX39A-218ENST00000592632 ADAMTSL3P82987 1691 aa20.22■□□□□ 0.83
DDX39A-218ENST00000592632 SIGLEC1Q9BZZ2 1709 aa20.22■□□□□ 0.83
DDX39A-218ENST00000592632 PTPRMP28827 1452 aa20.21■□□□□ 0.83
DDX39A-218ENST00000592632 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
DDX39A-218ENST00000592632 DIP2CQ9Y2E4 1556 aa20.2■□□□□ 0.82
DDX39A-218ENST00000592632 ABCA6Q8N139 1617 aa20.18■□□□□ 0.82
DDX39A-218ENST00000592632 BCORL1Q5H9F3 1711 aa20.18■□□□□ 0.82
DDX39A-218ENST00000592632 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
DDX39A-218ENST00000592632 MLECQ14165 292 aa20.16■□□□□ 0.82
DDX39A-218ENST00000592632 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
DDX39A-218ENST00000592632 CCDC141Q6ZP82 1450 aa20.15■□□□□ 0.82
DDX39A-218ENST00000592632 ATP7AQ04656 1500 aa20.15■□□□□ 0.82
DDX39A-218ENST00000592632 ARHGEF5Q12774 1597 aa20.14■□□□□ 0.81
DDX39A-218ENST00000592632 RTEL1-TNFRSF6BF6WH68 1400 aa20.14■□□□□ 0.81
DDX39A-218ENST00000592632 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
DDX39A-218ENST00000592632 REREQ9P2R6 1566 aa20.13■□□□□ 0.81
DDX39A-218ENST00000592632 INO80Q9ULG1 1556 aaPredicted RBP20.13■□□□□ 0.81
DDX39A-218ENST00000592632 TSPY4P0CV99 314 aa20.13■□□□□ 0.81
DDX39A-218ENST00000592632 TSPY10P0CW01 314 aa20.13■□□□□ 0.81
DDX39A-218ENST00000592632 PTPN23Q9H3S7 1636 aa20.11■□□□□ 0.81
DDX39A-218ENST00000592632 AGLP35573 1532 aa20.1■□□□□ 0.81
DDX39A-218ENST00000592632 TCOF1Q13428 1488 aaKnown RBP20.09■□□□□ 0.81
DDX39A-218ENST00000592632 RIMS1Q86UR5 1692 aaKnown RBP20.08■□□□□ 0.81
DDX39A-218ENST00000592632 A2MP01023 1474 aa20.08■□□□□ 0.81
DDX39A-218ENST00000592632 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
DDX39A-218ENST00000592632 ABCC5O15440 1437 aa20.07■□□□□ 0.8
DDX39A-218ENST00000592632 DHX29Q7Z478 1369 aaKnown RBP20.06■□□□□ 0.8
DDX39A-218ENST00000592632 FAM50AQ14320 339 aaKnown RBP20.04■□□□□ 0.8
DDX39A-218ENST00000592632 ADGBQ8N7X0 1667 aa20.03■□□□□ 0.8
DDX39A-218ENST00000592632 LMTK3Q96Q04 1460 aa20.03■□□□□ 0.8
DDX39A-218ENST00000592632 PLXNC1O60486 1568 aa20.03■□□□□ 0.8
DDX39A-218ENST00000592632 MAST1Q9Y2H9 1570 aa20.03■□□□□ 0.8
DDX39A-218ENST00000592632 DAPK1P53355 1430 aa20.01■□□□□ 0.79
DDX39A-218ENST00000592632 FER1L4A9Z1Z3 1794 aa19.99■□□□□ 0.79
DDX39A-218ENST00000592632 DNMT1P26358 1616 aaKnown RBP19.98■□□□□ 0.79
DDX39A-218ENST00000592632 KIF3BO15066 747 aa19.98■□□□□ 0.79
DDX39A-218ENST00000592632 GGT6Q6P531 493 aa19.98■□□□□ 0.79
DDX39A-218ENST00000592632 CHIC2Q9UKJ5 165 aa19.98■□□□□ 0.79
DDX39A-218ENST00000592632 SHANK2Q9UPX8 1470 aa19.97■□□□□ 0.79
DDX39A-218ENST00000592632 CEBPAP49715 358 aaPredicted RBP19.96■□□□□ 0.79
DDX39A-218ENST00000592632 RRP7BPQ9NSQ0 103 aa19.96■□□□□ 0.79
DDX39A-218ENST00000592632 CROCC2H7BZ55 1655 aa19.94■□□□□ 0.78
DDX39A-218ENST00000592632 HSPA2P54652 639 aa19.94■□□□□ 0.78
DDX39A-218ENST00000592632 ESF1Q9H501 851 aaKnown RBP19.94■□□□□ 0.78
DDX39A-218ENST00000592632 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
DDX39A-218ENST00000592632 FBXO41Q8TF61 875 aa19.93■□□□□ 0.78
DDX39A-218ENST00000592632 KIF15Q9NS87 1388 aa19.92■□□□□ 0.78
DDX39A-218ENST00000592632 PTPRKQ15262 1439 aa19.92■□□□□ 0.78
DDX39A-218ENST00000592632 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
DDX39A-218ENST00000592632 ANKRD30AQ9BXX3 1397 aa19.91■□□□□ 0.78
DDX39A-218ENST00000592632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.91■□□□□ 0.784e-9■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms