RNA–Protein interactions for RNA: ENST00000592573.1

RDH13-221, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-221ENST00000592573 TEX14Q8IWB6 1497 aa27.51■■□□□ 1.99
RDH13-221ENST00000592573 PREX2Q70Z35 1606 aa27.5■■□□□ 1.99
RDH13-221ENST00000592573 EFCAB2Q5VUJ9 269 aa27.5■■□□□ 1.99
RDH13-221ENST00000592573 CDC42BPBQ9Y5S2 1711 aa27.49■■□□□ 1.99
RDH13-221ENST00000592573 ZNF644Q9H582 1327 aaPredicted RBP27.47■■□□□ 1.99
RDH13-221ENST00000592573 AKNAQ7Z591 1439 aa27.46■■□□□ 1.99
RDH13-221ENST00000592573 MYOM3Q5VTT5 1437 aa27.45■■□□□ 1.98
RDH13-221ENST00000592573 ARAP3Q8WWN8 1544 aa27.43■■□□□ 1.98
RDH13-221ENST00000592573 NEO1Q92859 1461 aa27.43■■□□□ 1.98
RDH13-221ENST00000592573 COL17A1Q9UMD9 1497 aaPredicted RBP27.42■■□□□ 1.98
RDH13-221ENST00000592573 ITSN2Q9NZM3 1697 aa27.41■■□□□ 1.98
RDH13-221ENST00000592573 SAMD9LQ8IVG5 1584 aa27.39■■□□□ 1.97
RDH13-221ENST00000592573 ADGRL1O94910 1474 aa27.38■■□□□ 1.97
RDH13-221ENST00000592573 RAPGEF3O95398 923 aa27.38■■□□□ 1.97
RDH13-221ENST00000592573 CFAP74Q9C0B2 1584 aa27.37■■□□□ 1.97
RDH13-221ENST00000592573 SCAPERQ9BY12 1400 aa27.37■■□□□ 1.97
RDH13-221ENST00000592573 HNRNPMP52272 730 aaKnown RBP eCLIP27.37■■□□□ 1.97
RDH13-221ENST00000592573 FGD6Q6ZV73 1430 aa27.36■■□□□ 1.97
RDH13-221ENST00000592573 ARHGEF12Q9NZN5 1544 aa27.35■■□□□ 1.97
RDH13-221ENST00000592573 CAMSAP2Q08AD1 1489 aa27.34■■□□□ 1.97
RDH13-221ENST00000592573 KDM6BO15054 1643 aa27.33■■□□□ 1.97
RDH13-221ENST00000592573 ABCC1P33527 1531 aa27.33■■□□□ 1.96
RDH13-221ENST00000592573 SYCP2Q9BX26 1530 aa27.32■■□□□ 1.96
RDH13-221ENST00000592573 MIA2Q96PC5 1412 aa27.32■■□□□ 1.96
RDH13-221ENST00000592573 FAM50AQ14320 339 aaKnown RBP27.31■■□□□ 1.96
RDH13-221ENST00000592573 DENND4BO75064 1496 aaPredicted RBP27.3■■□□□ 1.96
RDH13-221ENST00000592573 AFAP1Q8N556 730 aa27.3■■□□□ 1.96
RDH13-221ENST00000592573 TRAPPC8Q9Y2L5 1435 aa27.29■■□□□ 1.96
RDH13-221ENST00000592573 PTPN23Q9H3S7 1636 aa27.29■■□□□ 1.96
RDH13-221ENST00000592573 POGZQ7Z3K3 1410 aa27.26■■□□□ 1.95
RDH13-221ENST00000592573 FRMPD1Q5SYB0 1578 aa27.25■■□□□ 1.95
RDH13-221ENST00000592573 PLEKHH2Q8IVE3 1493 aa27.24■■□□□ 1.95
RDH13-221ENST00000592573 KIAA1107Q9UPP5 1409 aa27.24■■□□□ 1.95
RDH13-221ENST00000592573 MBD5Q9P267 1494 aa27.23■■□□□ 1.95
RDH13-221ENST00000592573 TCOF1Q13428 1488 aaKnown RBP27.22■■□□□ 1.95
RDH13-221ENST00000592573 RICTORQ6R327 1708 aa27.19■■□□□ 1.94
RDH13-221ENST00000592573 MYT1LQ9UL68 1186 aa27.19■■□□□ 1.94
RDH13-221ENST00000592573 ZNF518AQ6AHZ1 1483 aa27.18■■□□□ 1.94
RDH13-221ENST00000592573 ITGAEP38570 1179 aa27.17■■□□□ 1.94
RDH13-221ENST00000592573 RRBP1Q9P2E9 1410 aaKnown RBP27.16■■□□□ 1.94
RDH13-221ENST00000592573 CCDC141Q6ZP82 1450 aa27.15■■□□□ 1.94
RDH13-221ENST00000592573 SPAG9O60271 1321 aaKnown RBP27.13■■□□□ 1.93
RDH13-221ENST00000592573 ABCC5O15440 1437 aa27.12■■□□□ 1.93
RDH13-221ENST00000592573 KDM5CP41229 1560 aa27.12■■□□□ 1.93
RDH13-221ENST00000592573 ARHGEF5Q12774 1597 aa27.11■■□□□ 1.93
RDH13-221ENST00000592573 YEATS2Q9ULM3 1422 aa27.11■■□□□ 1.93
RDH13-221ENST00000592573 CHIC2Q9UKJ5 165 aa27.11■■□□□ 1.93
RDH13-221ENST00000592573 DAPK1P53355 1430 aa27.1■■□□□ 1.93
RDH13-221ENST00000592573 ZMYM4Q5VZL5 1548 aa27.08■■□□□ 1.93
RDH13-221ENST00000592573 TSPY4P0CV99 314 aa27.07■■□□□ 1.92
RDH13-221ENST00000592573 TSPY10P0CW01 314 aa27.07■■□□□ 1.92
RDH13-221ENST00000592573 RSPH4AQ5TD94 716 aa27.07■■□□□ 1.92
RDH13-221ENST00000592573 DNMT1P26358 1616 aaKnown RBP27.06■■□□□ 1.92
RDH13-221ENST00000592573 PTPRKQ15262 1439 aa27.05■■□□□ 1.92
RDH13-221ENST00000592573 HECW2Q9P2P5 1572 aa27.05■■□□□ 1.92
RDH13-221ENST00000592573 C9orf84Q5VXU9 1444 aa27.05■■□□□ 1.92
RDH13-221ENST00000592573 ZFYVE16Q7Z3T8 1539 aa27.04■■□□□ 1.92
RDH13-221ENST00000592573 MLH3Q9UHC1 1453 aa27.03■■□□□ 1.92
RDH13-221ENST00000592573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.03■■□□□ 1.92
RDH13-221ENST00000592573 ATP7AQ04656 1500 aa27.02■■□□□ 1.92
RDH13-221ENST00000592573 INO80Q9ULG1 1556 aaPredicted RBP27.01■■□□□ 1.91
RDH13-221ENST00000592573 KIDINS220Q9ULH0 1771 aa27.01■■□□□ 1.91
RDH13-221ENST00000592573 MAGI2Q86UL8 1455 aa27■■□□□ 1.91
RDH13-221ENST00000592573 CROCC2H7BZ55 1655 aa26.99■■□□□ 1.91
RDH13-221ENST00000592573 ABCA6Q8N139 1617 aa26.99■■□□□ 1.91
RDH13-221ENST00000592573 ARHGEF40Q8TER5 1519 aa26.99■■□□□ 1.91
RDH13-221ENST00000592573 RRP7BPQ9NSQ0 103 aa26.97■■□□□ 1.91
RDH13-221ENST00000592573 SHANK2Q9UPX8 1470 aa26.97■■□□□ 1.91
RDH13-221ENST00000592573 DIP2CQ9Y2E4 1556 aa26.96■■□□□ 1.91
RDH13-221ENST00000592573 RTEL1-TNFRSF6BF6WH68 1400 aa26.96■■□□□ 1.91
RDH13-221ENST00000592573 MAST1Q9Y2H9 1570 aa26.95■■□□□ 1.9
RDH13-221ENST00000592573 ATP10AO60312 1499 aa26.93■■□□□ 1.9
RDH13-221ENST00000592573 ARID4BQ4LE39 1312 aaPredicted RBP26.89■■□□□ 1.9
RDH13-221ENST00000592573 ANKRD30AQ9BXX3 1397 aa26.89■■□□□ 1.9
RDH13-221ENST00000592573 KIF15Q9NS87 1388 aa26.89■■□□□ 1.9
RDH13-221ENST00000592573 SIGLEC1Q9BZZ2 1709 aa26.88■■□□□ 1.89
RDH13-221ENST00000592573 NCOA1Q15788 1441 aa26.88■■□□□ 1.89
RDH13-221ENST00000592573 A2MP01023 1474 aa26.87■■□□□ 1.89
RDH13-221ENST00000592573 ADGRL2O95490 1459 aa26.86■■□□□ 1.89
RDH13-221ENST00000592573 ADGBQ8N7X0 1667 aa26.85■■□□□ 1.89
RDH13-221ENST00000592573 PLXNC1O60486 1568 aa26.84■■□□□ 1.89
RDH13-221ENST00000592573 MLECQ14165 292 aa26.84■■□□□ 1.89
RDH13-221ENST00000592573 DHX29Q7Z478 1369 aaKnown RBP26.83■■□□□ 1.89
RDH13-221ENST00000592573 ROCK1Q13464 1354 aa26.81■■□□□ 1.88
RDH13-221ENST00000592573 TRIM26Q12899 539 aaPredicted RBP26.78■■□□□ 1.88
RDH13-221ENST00000592573 DUOX2Q9NRD8 1548 aa26.78■■□□□ 1.88
RDH13-221ENST00000592573 KIF3BO15066 747 aa26.77■■□□□ 1.88
RDH13-221ENST00000592573 REREQ9P2R6 1566 aa26.77■■□□□ 1.88
RDH13-221ENST00000592573 GGT6Q6P531 493 aa26.74■■□□□ 1.87
RDH13-221ENST00000592573 ANKRD50Q9ULJ7 1429 aa26.73■■□□□ 1.87
RDH13-221ENST00000592573 NAIPQ13075 1403 aa26.72■■□□□ 1.87
RDH13-221ENST00000592573 AGLP35573 1532 aa26.71■■□□□ 1.87
RDH13-221ENST00000592573 ERBINQ96RT1 1412 aa26.7■■□□□ 1.86
RDH13-221ENST00000592573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.68■■□□□ 1.86
RDH13-221ENST00000592573 HFM1A2PYH4 1435 aa26.68■■□□□ 1.86
RDH13-221ENST00000592573 BCORL1Q5H9F3 1711 aa26.63■■□□□ 1.85
RDH13-221ENST00000592573 GCC2Q8IWJ2 1684 aa26.62■■□□□ 1.85
RDH13-221ENST00000592573 KDM4FA0A1W2PPD8 638 aa26.62■■□□□ 1.85
RDH13-221ENST00000592573 EIF2AK4Q9P2K8 1649 aaKnown RBP26.61■■□□□ 1.85
RDH13-221ENST00000592573 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms