RNA–Protein interactions for RNA: ENST00000592194.1

PRKAR1A-220, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-220ENST00000592194 ARHGEF40Q8TER5 1519 aa22.25■■□□□ 1.15
PRKAR1A-220ENST00000592194 SCAPERQ9BY12 1400 aa22.24■■□□□ 1.15
PRKAR1A-220ENST00000592194 ZMYM4Q5VZL5 1548 aa22.24■■□□□ 1.15
PRKAR1A-220ENST00000592194 EFCAB2Q5VUJ9 269 aa22.23■■□□□ 1.15
PRKAR1A-220ENST00000592194 ILDR1Q86SU0 546 aaPredicted RBP22.22■■□□□ 1.15
PRKAR1A-220ENST00000592194 TROQ12816 1431 aaPredicted RBP22.22■■□□□ 1.15
PRKAR1A-220ENST00000592194 YEATS2Q9ULM3 1422 aa22.22■■□□□ 1.15
PRKAR1A-220ENST00000592194 MAGI2Q86UL8 1455 aa22.21■■□□□ 1.15
PRKAR1A-220ENST00000592194 KIF14Q15058 1648 aa22.2■■□□□ 1.15
PRKAR1A-220ENST00000592194 MADDQ8WXG6 1647 aa22.2■■□□□ 1.15
PRKAR1A-220ENST00000592194 MYO5CQ9NQX4 1742 aa22.2■■□□□ 1.14
PRKAR1A-220ENST00000592194 SIGLEC1Q9BZZ2 1709 aa22.19■■□□□ 1.14
PRKAR1A-220ENST00000592194 ZFYVE16Q7Z3T8 1539 aa22.17■■□□□ 1.14
PRKAR1A-220ENST00000592194 POGZQ7Z3K3 1410 aa22.17■■□□□ 1.14
PRKAR1A-220ENST00000592194 CASKIN1Q8WXD9 1431 aa22.15■■□□□ 1.14
PRKAR1A-220ENST00000592194 RIMS1Q86UR5 1692 aaKnown RBP22.13■■□□□ 1.13
PRKAR1A-220ENST00000592194 CLIP1P30622 1438 aa22.12■■□□□ 1.13
PRKAR1A-220ENST00000592194 CDC42BPBQ9Y5S2 1711 aa22.11■■□□□ 1.13
PRKAR1A-220ENST00000592194 AFAP1Q8N556 730 aa22.11■■□□□ 1.13
PRKAR1A-220ENST00000592194 ATP10AO60312 1499 aa22.1■■□□□ 1.13
PRKAR1A-220ENST00000592194 PCF11O94913 1555 aaKnown RBP22.09■■□□□ 1.13
PRKAR1A-220ENST00000592194 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
PRKAR1A-220ENST00000592194 MLECQ14165 292 aa22.08■■□□□ 1.13
PRKAR1A-220ENST00000592194 CCDC18Q5T9S5 1454 aa22.08■■□□□ 1.12
PRKAR1A-220ENST00000592194 LMTK3Q96Q04 1460 aa22.06■■□□□ 1.12
PRKAR1A-220ENST00000592194 ZNF518AQ6AHZ1 1483 aa22.05■■□□□ 1.12
PRKAR1A-220ENST00000592194 LOC105371045A0A1W2PR82 267 aa22.05■■□□□ 1.12
PRKAR1A-220ENST00000592194 C9orf84Q5VXU9 1444 aa22.05■■□□□ 1.12
PRKAR1A-220ENST00000592194 KDM5CP41229 1560 aa22.04■■□□□ 1.12
PRKAR1A-220ENST00000592194 FYCO1Q9BQS8 1478 aa22.02■■□□□ 1.12
PRKAR1A-220ENST00000592194 ARHGEF12Q9NZN5 1544 aa22.01■■□□□ 1.11
PRKAR1A-220ENST00000592194 FER1L4A9Z1Z3 1794 aa22.01■■□□□ 1.11
PRKAR1A-220ENST00000592194 PREX2Q70Z35 1606 aa22■■□□□ 1.11
PRKAR1A-220ENST00000592194 CDC42BPAQ5VT25 1732 aa22■■□□□ 1.11
PRKAR1A-220ENST00000592194 TRAPPC8Q9Y2L5 1435 aa21.99■■□□□ 1.11
PRKAR1A-220ENST00000592194 MLH3Q9UHC1 1453 aa21.98■■□□□ 1.11
PRKAR1A-220ENST00000592194 HSPA2P54652 639 aa21.97■■□□□ 1.11
PRKAR1A-220ENST00000592194 ABCC1P33527 1531 aa21.96■■□□□ 1.11
PRKAR1A-220ENST00000592194 MYT1LQ9UL68 1186 aa21.96■■□□□ 1.11
PRKAR1A-220ENST00000592194 DIP2CQ9Y2E4 1556 aa21.95■■□□□ 1.11
PRKAR1A-220ENST00000592194 CEBPAP49715 358 aaPredicted RBP21.94■■□□□ 1.1
PRKAR1A-220ENST00000592194 ITSN2Q9NZM3 1697 aa21.94■■□□□ 1.1
PRKAR1A-220ENST00000592194 REREQ9P2R6 1566 aa21.93■■□□□ 1.1
PRKAR1A-220ENST00000592194 SETD1BQ9UPS6 1966 aaKnown RBP21.93■■□□□ 1.1
PRKAR1A-220ENST00000592194 ABCA6Q8N139 1617 aa21.92■■□□□ 1.1
PRKAR1A-220ENST00000592194 GPATCH8Q9UKJ3 1502 aaKnown RBP21.92■■□□□ 1.1
PRKAR1A-220ENST00000592194 KIDINS220Q9ULH0 1771 aa21.91■■□□□ 1.1
PRKAR1A-220ENST00000592194 POTEDQ86YR6 584 aa21.9■■□□□ 1.1
PRKAR1A-220ENST00000592194 ZNF777Q9ULD5 760 aaPredicted RBP21.9■■□□□ 1.1
PRKAR1A-220ENST00000592194 SCAF1Q9H7N4 1312 aaKnown RBP21.89■■□□□ 1.1
PRKAR1A-220ENST00000592194 HNRNPMP52272 730 aaKnown RBP eCLIP21.88■■□□□ 1.091e-6■■□□□ 12
PRKAR1A-220ENST00000592194 FBXO41Q8TF61 875 aa21.88■■□□□ 1.09
PRKAR1A-220ENST00000592194 AGLP35573 1532 aa21.88■■□□□ 1.09
PRKAR1A-220ENST00000592194 SAMD9LQ8IVG5 1584 aa21.87■■□□□ 1.09
PRKAR1A-220ENST00000592194 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
PRKAR1A-220ENST00000592194 CFDP1Q9UEE9 299 aaPredicted RBP21.84■■□□□ 1.09
PRKAR1A-220ENST00000592194 KIAA1107Q9UPP5 1409 aa21.82■■□□□ 1.08
PRKAR1A-220ENST00000592194 PREX1Q8TCU6 1659 aa21.82■■□□□ 1.08
PRKAR1A-220ENST00000592194 SYCP2Q9BX26 1530 aa21.81■■□□□ 1.08
PRKAR1A-220ENST00000592194 MTUS2Q5JR59 1369 aa21.81■■□□□ 1.08
PRKAR1A-220ENST00000592194 CCNB3Q8WWL7 1395 aa21.81■■□□□ 1.08
PRKAR1A-220ENST00000592194 SPAG9O60271 1321 aaKnown RBP21.8■■□□□ 1.08
PRKAR1A-220ENST00000592194 C3P01024 1663 aa21.79■■□□□ 1.08
PRKAR1A-220ENST00000592194 ZNF644Q9H582 1327 aaPredicted RBP21.77■■□□□ 1.07
PRKAR1A-220ENST00000592194 PLEKHH2Q8IVE3 1493 aa21.77■■□□□ 1.07
PRKAR1A-220ENST00000592194 ESF1Q9H501 851 aaKnown RBP21.76■■□□□ 1.07
PRKAR1A-220ENST00000592194 STRCQ7RTU9 1775 aa21.74■■□□□ 1.07
PRKAR1A-220ENST00000592194 PPP4R3CPQ6ZMV5 832 aa21.74■■□□□ 1.07
PRKAR1A-220ENST00000592194 UHRF1BP1Q6BDS2 1440 aa21.73■■□□□ 1.07
PRKAR1A-220ENST00000592194 SUPT6HQ7KZ85 1726 aaKnown RBP21.72■■□□□ 1.07
PRKAR1A-220ENST00000592194 ATP7AQ04656 1500 aa21.72■■□□□ 1.07
PRKAR1A-220ENST00000592194 TIAM1Q13009 1591 aa21.72■■□□□ 1.07
PRKAR1A-220ENST00000592194 CNTLNQ9NXG0 1405 aa21.72■■□□□ 1.07
PRKAR1A-220ENST00000592194 MBD5Q9P267 1494 aa21.71■■□□□ 1.07
PRKAR1A-220ENST00000592194 EHBP1L1Q8N3D4 1523 aa21.71■■□□□ 1.07
PRKAR1A-220ENST00000592194 INO80Q9ULG1 1556 aaPredicted RBP21.7■■□□□ 1.06
PRKAR1A-220ENST00000592194 MAPK8IP2Q13387 824 aaPredicted RBP21.7■■□□□ 1.06
PRKAR1A-220ENST00000592194 CERKQ8TCT0 537 aa21.7■■□□□ 1.06
PRKAR1A-220ENST00000592194 ZMYM3Q14202 1370 aa21.69■■□□□ 1.06
PRKAR1A-220ENST00000592194 A2MP01023 1474 aa21.69■■□□□ 1.06
PRKAR1A-220ENST00000592194 DMRT2Q9Y5R5 561 aa21.68■■□□□ 1.06
PRKAR1A-220ENST00000592194 PLXNC1O60486 1568 aa21.67■■□□□ 1.06
PRKAR1A-220ENST00000592194 MROH2AA6NES4 1674 aa21.66■■□□□ 1.06
PRKAR1A-220ENST00000592194 GGT6Q6P531 493 aa21.64■■□□□ 1.05
PRKAR1A-220ENST00000592194 NCOA2Q15596 1464 aa21.64■■□□□ 1.05
PRKAR1A-220ENST00000592194 RTEL1-TNFRSF6BF6WH68 1400 aa21.63■■□□□ 1.05
PRKAR1A-220ENST00000592194 NPATQ14207 1427 aa21.63■■□□□ 1.05
PRKAR1A-220ENST00000592194 ADGBQ8N7X0 1667 aa21.62■■□□□ 1.05
PRKAR1A-220ENST00000592194 CLTCQ00610 1675 aaKnown RBP21.6■■□□□ 1.05
PRKAR1A-220ENST00000592194 RSPH4AQ5TD94 716 aa21.6■■□□□ 1.05
PRKAR1A-220ENST00000592194 PTPRTO14522 1441 aa21.6■■□□□ 1.05
PRKAR1A-220ENST00000592194 DHX29Q7Z478 1369 aaKnown RBP21.6■■□□□ 1.05
PRKAR1A-220ENST00000592194 PTPRKQ15262 1439 aa21.56■■□□□ 1.04
PRKAR1A-220ENST00000592194 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
PRKAR1A-220ENST00000592194 NCOA1Q15788 1441 aa21.55■■□□□ 1.04
PRKAR1A-220ENST00000592194 CAMSAP2Q08AD1 1489 aa21.54■■□□□ 1.04
PRKAR1A-220ENST00000592194 CCDC141Q6ZP82 1450 aa21.54■■□□□ 1.04
PRKAR1A-220ENST00000592194 LRRC9Q6ZRR7 1453 aa21.54■■□□□ 1.04
PRKAR1A-220ENST00000592194 KANK4Q5T7N3 995 aaPredicted RBP21.54■■□□□ 1.04
PRKAR1A-220ENST00000592194 CAMSAP1Q5T5Y3 1602 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms