RNA–Protein interactions for RNA: ENST00000591956.1

SNHG16-208, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 2

Gene SNHG16, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-208ENST00000591956 DENND4BO75064 1496 aaPredicted RBP17.89■□□□□ 0.45
SNHG16-208ENST00000591956 GPATCH8Q9UKJ3 1502 aaKnown RBP17.89■□□□□ 0.45
SNHG16-208ENST00000591956 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
SNHG16-208ENST00000591956 RAPGEF3O95398 923 aa17.88■□□□□ 0.45
SNHG16-208ENST00000591956 CDC42BPBQ9Y5S2 1711 aa17.88■□□□□ 0.45
SNHG16-208ENST00000591956 CCNB3Q8WWL7 1395 aa17.87■□□□□ 0.45
SNHG16-208ENST00000591956 SCAPERQ9BY12 1400 aa17.87■□□□□ 0.45
SNHG16-208ENST00000591956 PREX2Q70Z35 1606 aa17.87■□□□□ 0.45
SNHG16-208ENST00000591956 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
SNHG16-208ENST00000591956 CDC42BPAQ5VT25 1732 aa17.86■□□□□ 0.45
SNHG16-208ENST00000591956 MAGI2Q86UL8 1455 aa17.85■□□□□ 0.45
SNHG16-208ENST00000591956 CFDP1Q9UEE9 299 aaPredicted RBP17.85■□□□□ 0.45
SNHG16-208ENST00000591956 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
SNHG16-208ENST00000591956 KIAA1107Q9UPP5 1409 aa17.83■□□□□ 0.45
SNHG16-208ENST00000591956 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.44
SNHG16-208ENST00000591956 RICTORQ6R327 1708 aa17.83■□□□□ 0.44
SNHG16-208ENST00000591956 RSPH4AQ5TD94 716 aa17.81■□□□□ 0.44
SNHG16-208ENST00000591956 NCOA2Q15596 1464 aa17.81■□□□□ 0.44
SNHG16-208ENST00000591956 ZNF518AQ6AHZ1 1483 aa17.81■□□□□ 0.44
SNHG16-208ENST00000591956 PLEKHH2Q8IVE3 1493 aa17.81■□□□□ 0.44
SNHG16-208ENST00000591956 HECW2Q9P2P5 1572 aa17.8■□□□□ 0.44
SNHG16-208ENST00000591956 POGZQ7Z3K3 1410 aa17.8■□□□□ 0.44
SNHG16-208ENST00000591956 ZMYM4Q5VZL5 1548 aa17.79■□□□□ 0.44
SNHG16-208ENST00000591956 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
SNHG16-208ENST00000591956 ITSN2Q9NZM3 1697 aa17.77■□□□□ 0.44
SNHG16-208ENST00000591956 AFAP1Q8N556 730 aa17.77■□□□□ 0.44
SNHG16-208ENST00000591956 ABCC1P33527 1531 aa17.76■□□□□ 0.43
SNHG16-208ENST00000591956 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
SNHG16-208ENST00000591956 ZNF777Q9ULD5 760 aaPredicted RBP17.75■□□□□ 0.43
SNHG16-208ENST00000591956 KDM5CP41229 1560 aa17.74■□□□□ 0.43
SNHG16-208ENST00000591956 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
SNHG16-208ENST00000591956 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
SNHG16-208ENST00000591956 ILDR1Q86SU0 546 aaPredicted RBP17.74■□□□□ 0.43
SNHG16-208ENST00000591956 SAMD9LQ8IVG5 1584 aa17.73■□□□□ 0.43
SNHG16-208ENST00000591956 HNRNPMP52272 730 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNHG16-208ENST00000591956 TRAPPC8Q9Y2L5 1435 aa17.72■□□□□ 0.43
SNHG16-208ENST00000591956 ARID4BQ4LE39 1312 aaPredicted RBP17.71■□□□□ 0.42
SNHG16-208ENST00000591956 MBD5Q9P267 1494 aa17.7■□□□□ 0.42
SNHG16-208ENST00000591956 MYOM3Q5VTT5 1437 aa17.7■□□□□ 0.42
SNHG16-208ENST00000591956 ATP10AO60312 1499 aa17.69■□□□□ 0.42
SNHG16-208ENST00000591956 ZNF644Q9H582 1327 aaPredicted RBP17.69■□□□□ 0.42
SNHG16-208ENST00000591956 ZFYVE16Q7Z3T8 1539 aa17.68■□□□□ 0.42
SNHG16-208ENST00000591956 ADAMTSL3P82987 1691 aa17.68■□□□□ 0.42
SNHG16-208ENST00000591956 ARHGEF40Q8TER5 1519 aa17.67■□□□□ 0.42
SNHG16-208ENST00000591956 RTEL1-TNFRSF6BF6WH68 1400 aa17.67■□□□□ 0.42
SNHG16-208ENST00000591956 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
SNHG16-208ENST00000591956 SPAG9O60271 1321 aaKnown RBP17.66■□□□□ 0.42
SNHG16-208ENST00000591956 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
SNHG16-208ENST00000591956 PTPRMP28827 1452 aa17.65■□□□□ 0.42
SNHG16-208ENST00000591956 BCORL1Q5H9F3 1711 aa17.65■□□□□ 0.42
SNHG16-208ENST00000591956 REREQ9P2R6 1566 aa17.64■□□□□ 0.41
SNHG16-208ENST00000591956 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
SNHG16-208ENST00000591956 TSPY4P0CV99 314 aa17.63■□□□□ 0.41
SNHG16-208ENST00000591956 TSPY10P0CW01 314 aa17.63■□□□□ 0.41
SNHG16-208ENST00000591956 C9orf84Q5VXU9 1444 aa17.63■□□□□ 0.41
SNHG16-208ENST00000591956 ARHGEF5Q12774 1597 aa17.62■□□□□ 0.41
SNHG16-208ENST00000591956 KIDINS220Q9ULH0 1771 aa17.62■□□□□ 0.41
SNHG16-208ENST00000591956 MYT1LQ9UL68 1186 aa17.61■□□□□ 0.41
SNHG16-208ENST00000591956 MADDQ8WXG6 1647 aa17.61■□□□□ 0.41
SNHG16-208ENST00000591956 CCDC141Q6ZP82 1450 aa17.6■□□□□ 0.41
SNHG16-208ENST00000591956 AGLP35573 1532 aa17.59■□□□□ 0.41
SNHG16-208ENST00000591956 DIP2CQ9Y2E4 1556 aa17.58■□□□□ 0.41
SNHG16-208ENST00000591956 TCOF1Q13428 1488 aaKnown RBP17.58■□□□□ 0.41
SNHG16-208ENST00000591956 FGD6Q6ZV73 1430 aa17.58■□□□□ 0.41
SNHG16-208ENST00000591956 ATP7AQ04656 1500 aa17.57■□□□□ 0.4
SNHG16-208ENST00000591956 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
SNHG16-208ENST00000591956 RIMS1Q86UR5 1692 aaKnown RBP17.57■□□□□ 0.4
SNHG16-208ENST00000591956 INO80Q9ULG1 1556 aaPredicted RBP17.57■□□□□ 0.4
SNHG16-208ENST00000591956 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
SNHG16-208ENST00000591956 ABCA6Q8N139 1617 aa17.54■□□□□ 0.4
SNHG16-208ENST00000591956 PTPN23Q9H3S7 1636 aa17.54■□□□□ 0.4
SNHG16-208ENST00000591956 MLECQ14165 292 aa17.54■□□□□ 0.4
SNHG16-208ENST00000591956 SIGLEC1Q9BZZ2 1709 aa17.54■□□□□ 0.4
SNHG16-208ENST00000591956 DHX29Q7Z478 1369 aaKnown RBP17.53■□□□□ 0.4
SNHG16-208ENST00000591956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.53■□□□□ 0.41e-8■■■□□ 15.3
SNHG16-208ENST00000591956 MAST1Q9Y2H9 1570 aa17.53■□□□□ 0.4
SNHG16-208ENST00000591956 A2MP01023 1474 aa17.52■□□□□ 0.4
SNHG16-208ENST00000591956 ADGBQ8N7X0 1667 aa17.52■□□□□ 0.39
SNHG16-208ENST00000591956 ABCC5O15440 1437 aa17.49■□□□□ 0.39
SNHG16-208ENST00000591956 SHANK2Q9UPX8 1470 aa17.49■□□□□ 0.39
SNHG16-208ENST00000591956 PLXNC1O60486 1568 aa17.49■□□□□ 0.39
SNHG16-208ENST00000591956 LMTK3Q96Q04 1460 aa17.48■□□□□ 0.39
SNHG16-208ENST00000591956 DNMT1P26358 1616 aaKnown RBP17.47■□□□□ 0.39
SNHG16-208ENST00000591956 DAPK1P53355 1430 aa17.47■□□□□ 0.39
SNHG16-208ENST00000591956 HSPA2P54652 639 aa17.46■□□□□ 0.39
SNHG16-208ENST00000591956 FER1L4A9Z1Z3 1794 aa17.45■□□□□ 0.38
SNHG16-208ENST00000591956 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
SNHG16-208ENST00000591956 CNTLNQ9NXG0 1405 aa17.43■□□□□ 0.38
SNHG16-208ENST00000591956 ANKRD30AQ9BXX3 1397 aa17.42■□□□□ 0.38
SNHG16-208ENST00000591956 NCOA1Q15788 1441 aa17.42■□□□□ 0.38
SNHG16-208ENST00000591956 ESF1Q9H501 851 aaKnown RBP17.42■□□□□ 0.38
SNHG16-208ENST00000591956 PPARGC1BQ86YN6 1023 aaKnown RBP17.41■□□□□ 0.38
SNHG16-208ENST00000591956 FBXO41Q8TF61 875 aa17.41■□□□□ 0.38
SNHG16-208ENST00000591956 CROCC2H7BZ55 1655 aa17.41■□□□□ 0.38
SNHG16-208ENST00000591956 DUOX2Q9NRD8 1548 aa17.41■□□□□ 0.38
SNHG16-208ENST00000591956 RRBP1Q9P2E9 1410 aaKnown RBP17.4■□□□□ 0.38
SNHG16-208ENST00000591956 ADGRL2O95490 1459 aa17.39■□□□□ 0.37
SNHG16-208ENST00000591956 SETD1BQ9UPS6 1966 aaKnown RBP17.39■□□□□ 0.37
SNHG16-208ENST00000591956 FAM135AQ9P2D6 1515 aa17.39■□□□□ 0.37
SNHG16-208ENST00000591956 KIF3BO15066 747 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms