RNA–Protein interactions for RNA: ENST00000591661.1

MBD1-226, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-226ENST00000591661 PREX2Q70Z35 1606 aa22.75■■□□□ 1.23
MBD1-226ENST00000591661 GPATCH8Q9UKJ3 1502 aaKnown RBP22.73■■□□□ 1.23
MBD1-226ENST00000591661 FRMPD1Q5SYB0 1578 aa22.73■■□□□ 1.23
MBD1-226ENST00000591661 SCAPERQ9BY12 1400 aa22.73■■□□□ 1.23
MBD1-226ENST00000591661 CDC42BPBQ9Y5S2 1711 aa22.72■■□□□ 1.23
MBD1-226ENST00000591661 CCNB3Q8WWL7 1395 aa22.71■■□□□ 1.23
MBD1-226ENST00000591661 LRRC9Q6ZRR7 1453 aa22.71■■□□□ 1.23
MBD1-226ENST00000591661 CDC42BPAQ5VT25 1732 aa22.71■■□□□ 1.23
MBD1-226ENST00000591661 POGZQ7Z3K3 1410 aa22.69■■□□□ 1.22
MBD1-226ENST00000591661 RICTORQ6R327 1708 aa22.68■■□□□ 1.22
MBD1-226ENST00000591661 ZMYM4Q5VZL5 1548 aa22.66■■□□□ 1.22
MBD1-226ENST00000591661 NCOA2Q15596 1464 aa22.66■■□□□ 1.22
MBD1-226ENST00000591661 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
MBD1-226ENST00000591661 CFDP1Q9UEE9 299 aaPredicted RBP22.65■■□□□ 1.22
MBD1-226ENST00000591661 SUPT6HQ7KZ85 1726 aaKnown RBP22.65■■□□□ 1.22
MBD1-226ENST00000591661 ABCC1P33527 1531 aa22.64■■□□□ 1.21
MBD1-226ENST00000591661 APLP2Q06481 763 aa22.64■■□□□ 1.21
MBD1-226ENST00000591661 ZNF518AQ6AHZ1 1483 aa22.63■■□□□ 1.21
MBD1-226ENST00000591661 MAGI2Q86UL8 1455 aa22.62■■□□□ 1.21
MBD1-226ENST00000591661 ARHGEF12Q9NZN5 1544 aa22.62■■□□□ 1.21
MBD1-226ENST00000591661 SAMD9LQ8IVG5 1584 aa22.6■■□□□ 1.21
MBD1-226ENST00000591661 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
MBD1-226ENST00000591661 ZNF777Q9ULD5 760 aaPredicted RBP22.6■■□□□ 1.21
MBD1-226ENST00000591661 ARHGEF40Q8TER5 1519 aa22.59■■□□□ 1.21
MBD1-226ENST00000591661 AFAP1Q8N556 730 aa22.59■■□□□ 1.21
MBD1-226ENST00000591661 PLEKHH2Q8IVE3 1493 aa22.59■■□□□ 1.21
MBD1-226ENST00000591661 KDM5CP41229 1560 aa22.59■■□□□ 1.21
MBD1-226ENST00000591661 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.21
MBD1-226ENST00000591661 TRAPPC8Q9Y2L5 1435 aa22.57■■□□□ 1.2
MBD1-226ENST00000591661 ZFYVE16Q7Z3T8 1539 aa22.57■■□□□ 1.2
MBD1-226ENST00000591661 KDM4FA0A1W2PPD8 638 aa22.56■■□□□ 1.2
MBD1-226ENST00000591661 YEATS2Q9ULM3 1422 aa22.56■■□□□ 1.2
MBD1-226ENST00000591661 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
MBD1-226ENST00000591661 MLH3Q9UHC1 1453 aa22.53■■□□□ 1.2
MBD1-226ENST00000591661 HNRNPMP52272 730 aaKnown RBP eCLIP22.52■■□□□ 1.2
MBD1-226ENST00000591661 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
MBD1-226ENST00000591661 HECW2Q9P2P5 1572 aa22.5■■□□□ 1.19
MBD1-226ENST00000591661 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
MBD1-226ENST00000591661 MBD5Q9P267 1494 aa22.48■■□□□ 1.19
MBD1-226ENST00000591661 MIA2Q96PC5 1412 aa22.48■■□□□ 1.19
MBD1-226ENST00000591661 ATP10AO60312 1499 aa22.47■■□□□ 1.19
MBD1-226ENST00000591661 AEBP2Q6ZN18 517 aaPredicted RBP22.46■■□□□ 1.19
MBD1-226ENST00000591661 C9orf84Q5VXU9 1444 aa22.46■■□□□ 1.19
MBD1-226ENST00000591661 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
MBD1-226ENST00000591661 SPAG9O60271 1321 aaKnown RBP22.44■■□□□ 1.18
MBD1-226ENST00000591661 DIP2CQ9Y2E4 1556 aa22.43■■□□□ 1.18
MBD1-226ENST00000591661 ARID4BQ4LE39 1312 aaPredicted RBP22.43■■□□□ 1.18
MBD1-226ENST00000591661 RSPH4AQ5TD94 716 aa22.43■■□□□ 1.18
MBD1-226ENST00000591661 MYT1LQ9UL68 1186 aa22.43■■□□□ 1.18
MBD1-226ENST00000591661 KIDINS220Q9ULH0 1771 aa22.41■■□□□ 1.18
MBD1-226ENST00000591661 ABCA6Q8N139 1617 aa22.41■■□□□ 1.18
MBD1-226ENST00000591661 REREQ9P2R6 1566 aa22.41■■□□□ 1.18
MBD1-226ENST00000591661 CCDC141Q6ZP82 1450 aa22.4■■□□□ 1.18
MBD1-226ENST00000591661 SIGLEC1Q9BZZ2 1709 aa22.39■■□□□ 1.17
MBD1-226ENST00000591661 INO80Q9ULG1 1556 aaPredicted RBP22.38■■□□□ 1.17
MBD1-226ENST00000591661 ATP7AQ04656 1500 aa22.38■■□□□ 1.17
MBD1-226ENST00000591661 BCORL1Q5H9F3 1711 aa22.38■■□□□ 1.17
MBD1-226ENST00000591661 ARHGEF5Q12774 1597 aa22.38■■□□□ 1.17
MBD1-226ENST00000591661 ADAMTSL3P82987 1691 aa22.37■■□□□ 1.17
MBD1-226ENST00000591661 RTEL1-TNFRSF6BF6WH68 1400 aa22.37■■□□□ 1.17
MBD1-226ENST00000591661 FGD6Q6ZV73 1430 aa22.35■■□□□ 1.17
MBD1-226ENST00000591661 AGLP35573 1532 aa22.34■■□□□ 1.17
MBD1-226ENST00000591661 TCOF1Q13428 1488 aaKnown RBP22.32■■□□□ 1.16
MBD1-226ENST00000591661 PTPN23Q9H3S7 1636 aa22.31■■□□□ 1.16
MBD1-226ENST00000591661 TSPY4P0CV99 314 aa22.31■■□□□ 1.16
MBD1-226ENST00000591661 TSPY10P0CW01 314 aa22.31■■□□□ 1.16
MBD1-226ENST00000591661 A2MP01023 1474 aa22.28■■□□□ 1.16
MBD1-226ENST00000591661 MADDQ8WXG6 1647 aa22.28■■□□□ 1.16
MBD1-226ENST00000591661 MLECQ14165 292 aa22.28■■□□□ 1.16
MBD1-226ENST00000591661 PLXNC1O60486 1568 aa22.27■■□□□ 1.16
MBD1-226ENST00000591661 MAST1Q9Y2H9 1570 aa22.26■■□□□ 1.15
MBD1-226ENST00000591661 PTPRMP28827 1452 aa22.26■■□□□ 1.15
MBD1-226ENST00000591661 ABCC5O15440 1437 aa22.24■■□□□ 1.15
MBD1-226ENST00000591661 DHX29Q7Z478 1369 aaKnown RBP22.24■■□□□ 1.15
MBD1-226ENST00000591661 ADGBQ8N7X0 1667 aa22.23■■□□□ 1.15
MBD1-226ENST00000591661 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
MBD1-226ENST00000591661 PPARGC1BQ86YN6 1023 aaKnown RBP22.21■■□□□ 1.15
MBD1-226ENST00000591661 DAPK1P53355 1430 aa22.21■■□□□ 1.15
MBD1-226ENST00000591661 DNMT1P26358 1616 aaKnown RBP22.2■■□□□ 1.14
MBD1-226ENST00000591661 RIMS1Q86UR5 1692 aaKnown RBP22.18■■□□□ 1.14
MBD1-226ENST00000591661 FER1L4A9Z1Z3 1794 aa22.17■■□□□ 1.14
MBD1-226ENST00000591661 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
MBD1-226ENST00000591661 CROCC2H7BZ55 1655 aa22.16■■□□□ 1.14
MBD1-226ENST00000591661 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
MBD1-226ENST00000591661 CNTLNQ9NXG0 1405 aa22.13■■□□□ 1.13
MBD1-226ENST00000591661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.12■■□□□ 1.13
MBD1-226ENST00000591661 KIF3BO15066 747 aa22.11■■□□□ 1.13
MBD1-226ENST00000591661 GGT6Q6P531 493 aa22.11■■□□□ 1.13
MBD1-226ENST00000591661 ESF1Q9H501 851 aaKnown RBP22.11■■□□□ 1.13
MBD1-226ENST00000591661 KIF15Q9NS87 1388 aa22.11■■□□□ 1.13
MBD1-226ENST00000591661 DUOX2Q9NRD8 1548 aa22.1■■□□□ 1.13
MBD1-226ENST00000591661 ANKRD30AQ9BXX3 1397 aa22.09■■□□□ 1.13
MBD1-226ENST00000591661 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
MBD1-226ENST00000591661 NCOA1Q15788 1441 aa22.08■■□□□ 1.13
MBD1-226ENST00000591661 RRBP1Q9P2E9 1410 aaKnown RBP22.07■■□□□ 1.12
MBD1-226ENST00000591661 RRP7BPQ9NSQ0 103 aa22.07■■□□□ 1.12
MBD1-226ENST00000591661 CHIC2Q9UKJ5 165 aa22.07■■□□□ 1.12
MBD1-226ENST00000591661 EIF2AK4Q9P2K8 1649 aaKnown RBP22.06■■□□□ 1.12
MBD1-226ENST00000591661 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
MBD1-226ENST00000591661 CEBPAP49715 358 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms