RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TAOK2Q9UL54 1235 aa10.33□□□□□ -0.76
VPS4B-205ENST00000591383 ARHGAP35Q9NRY4 1499 aa10.33□□□□□ -0.76
VPS4B-205ENST00000591383 PTPRGP23470 1445 aa10.33□□□□□ -0.76
VPS4B-205ENST00000591383 CLIP1P30622 1438 aa10.33□□□□□ -0.76
VPS4B-205ENST00000591383 CYB5RLQ6IPT4 315 aa10.32□□□□□ -0.76
VPS4B-205ENST00000591383 P3H3Q8IVL6 736 aa10.32□□□□□ -0.76
VPS4B-205ENST00000591383 CFAP44Q96MT7 982 aa10.32□□□□□ -0.76
VPS4B-205ENST00000591383 DSG3P32926 999 aa10.31□□□□□ -0.76
VPS4B-205ENST00000591383 MIER1Q8N108 512 aa10.31□□□□□ -0.76
VPS4B-205ENST00000591383 RAPGEF6Q8TEU7 1601 aa10.31□□□□□ -0.76
VPS4B-205ENST00000591383 ABCC2Q92887 1545 aa10.31□□□□□ -0.76
VPS4B-205ENST00000591383 PCF11O94913 1555 aaKnown RBP10.31□□□□□ -0.76
VPS4B-205ENST00000591383 LOC105371045A0A1W2PR82 267 aa10.3□□□□□ -0.76
VPS4B-205ENST00000591383 PLB1Q6P1J6 1458 aa10.3□□□□□ -0.76
VPS4B-205ENST00000591383 ABCA8O94911 1581 aa10.29□□□□□ -0.76
VPS4B-205ENST00000591383 ZCCHC11Q5TAX3 1644 aaKnown RBP10.28□□□□□ -0.76
VPS4B-205ENST00000591383 HECW1Q76N89 1606 aa10.28□□□□□ -0.76
VPS4B-205ENST00000591383 UACAQ9BZF9 1416 aa10.26□□□□□ -0.77
VPS4B-205ENST00000591383 FMN1Q68DA7 1419 aa10.25□□□□□ -0.77
VPS4B-205ENST00000591383 UHRF1BP1LA0JNW5 1464 aa10.25□□□□□ -0.77
VPS4B-205ENST00000591383 SPRYD3Q8NCJ5 442 aa10.24□□□□□ -0.77
VPS4B-205ENST00000591383 NUP153P49790 1475 aaKnown RBP10.23□□□□□ -0.77
VPS4B-205ENST00000591383 FYCO1Q9BQS8 1478 aa10.23□□□□□ -0.77
VPS4B-205ENST00000591383 LRRIQ1Q96JM4 1722 aa10.22□□□□□ -0.77
VPS4B-205ENST00000591383 ARID3CA6NKF2 412 aa10.22□□□□□ -0.77
VPS4B-205ENST00000591383 CDK13Q14004 1512 aaKnown RBP10.22□□□□□ -0.77
VPS4B-205ENST00000591383 TSHZ2Q9NRE2 1034 aa10.21□□□□□ -0.77
VPS4B-205ENST00000591383 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.77
VPS4B-205ENST00000591383 MAPKBP1O60336 1514 aa10.21□□□□□ -0.78
VPS4B-205ENST00000591383 KDM5BQ9UGL1 1544 aa10.2□□□□□ -0.78
VPS4B-205ENST00000591383 CFAP43Q8NDM7 1665 aa10.19□□□□□ -0.78
VPS4B-205ENST00000591383 CASKIN1Q8WXD9 1431 aa10.19□□□□□ -0.78
VPS4B-205ENST00000591383 ATP1B4Q9UN42 357 aaPredicted RBP10.19□□□□□ -0.78
VPS4B-205ENST00000591383 CHGAP10645 457 aaKnown RBP10.18□□□□□ -0.78
VPS4B-205ENST00000591383 DIP2BQ9P265 1576 aa10.18□□□□□ -0.78
VPS4B-205ENST00000591383 EPRSP07814 1512 aaKnown RBP10.17□□□□□ -0.78
VPS4B-205ENST00000591383 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
VPS4B-205ENST00000591383 VPS8Q8N3P4 1428 aa10.17□□□□□ -0.78
VPS4B-205ENST00000591383 TPRNQ4KMQ1 711 aa10.17□□□□□ -0.78
VPS4B-205ENST00000591383 ZBTB47Q9UFB7 747 aaPredicted RBP10.17□□□□□ -0.78
VPS4B-205ENST00000591383 WDR7Q9Y4E6 1490 aa10.17□□□□□ -0.78
VPS4B-205ENST00000591383 KIF13AQ9H1H9 1805 aa10.17□□□□□ -0.78
VPS4B-205ENST00000591383 ASXL2Q76L83 1435 aa10.16□□□□□ -0.78
VPS4B-205ENST00000591383 PLEKHG5O94827 1062 aa10.16□□□□□ -0.78
VPS4B-205ENST00000591383 ATP10BO94823 1461 aa10.16□□□□□ -0.78
VPS4B-205ENST00000591383 POTEDQ86YR6 584 aa10.13□□□□□ -0.79
VPS4B-205ENST00000591383 KIF14Q15058 1648 aa10.13□□□□□ -0.79
VPS4B-205ENST00000591383 TIAM1Q13009 1591 aa10.12□□□□□ -0.79
VPS4B-205ENST00000591383 TSPOAP1O95153 1857 aa10.12□□□□□ -0.79
VPS4B-205ENST00000591383 EHBP1L1Q8N3D4 1523 aa10.11□□□□□ -0.79
VPS4B-205ENST00000591383 ABCC10Q5T3U5 1492 aa10.1□□□□□ -0.79
VPS4B-205ENST00000591383 TTC37Q6PGP7 1564 aa10.1□□□□□ -0.79
VPS4B-205ENST00000591383 MAGI3Q5TCQ9 1506 aa10.1□□□□□ -0.79
VPS4B-205ENST00000591383 MAP3K4Q9Y6R4 1608 aa10.1□□□□□ -0.79
VPS4B-205ENST00000591383 ABCA9Q8IUA7 1624 aa10.08□□□□□ -0.8
VPS4B-205ENST00000591383 HS6ST3Q8IZP7 471 aa10.08□□□□□ -0.8
VPS4B-205ENST00000591383 GLI2P10070 1586 aa10.08□□□□□ -0.8
VPS4B-205ENST00000591383 TROQ12816 1431 aaPredicted RBP10.07□□□□□ -0.8
VPS4B-205ENST00000591383 MYO5CQ9NQX4 1742 aa10.07□□□□□ -0.8
VPS4B-205ENST00000591383 PPRC1Q5VV67 1664 aaKnown RBP10.06□□□□□ -0.8
VPS4B-205ENST00000591383 MTUS2Q5JR59 1369 aa10.06□□□□□ -0.8
VPS4B-205ENST00000591383 SUPT6HQ7KZ85 1726 aaKnown RBP10.06□□□□□ -0.8
VPS4B-205ENST00000591383 FAM69CQ0P6D2 419 aa10.05□□□□□ -0.8
VPS4B-205ENST00000591383 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
VPS4B-205ENST00000591383 CDK11AQ9UQ88 783 aaPredicted RBP10.05□□□□□ -0.8
VPS4B-205ENST00000591383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.05□□□□□ -0.8
VPS4B-205ENST00000591383 PREX2Q70Z35 1606 aa10.04□□□□□ -0.8
VPS4B-205ENST00000591383 PLEKHD1A6NEE1 506 aa10.04□□□□□ -0.8
VPS4B-205ENST00000591383 RNF25Q96BH1 459 aaPredicted RBP10.04□□□□□ -0.8
VPS4B-205ENST00000591383 CFAP74Q9C0B2 1584 aa10.04□□□□□ -0.8
VPS4B-205ENST00000591383 ITSN2Q9NZM3 1697 aa10.03□□□□□ -0.8
VPS4B-205ENST00000591383 GSE1Q14687 1217 aa10.03□□□□□ -0.8
VPS4B-205ENST00000591383 CDC42BPAQ5VT25 1732 aa10.03□□□□□ -0.8
VPS4B-205ENST00000591383 LRRC9Q6ZRR7 1453 aa10.03□□□□□ -0.8
VPS4B-205ENST00000591383 MAP3K1Q13233 1512 aa10.02□□□□□ -0.8
VPS4B-205ENST00000591383 TEX14Q8IWB6 1497 aa10.02□□□□□ -0.81
VPS4B-205ENST00000591383 CD109Q6YHK3 1445 aa10.01□□□□□ -0.81
VPS4B-205ENST00000591383 ARHGAP5Q13017 1502 aa10.01□□□□□ -0.81
VPS4B-205ENST00000591383 NUBP1P53384 320 aa10□□□□□ -0.81
VPS4B-205ENST00000591383 KDM6BO15054 1643 aa10□□□□□ -0.81
VPS4B-205ENST00000591383 CDC42BPBQ9Y5S2 1711 aa9.99□□□□□ -0.81
VPS4B-205ENST00000591383 NCOA2Q15596 1464 aa9.99□□□□□ -0.81
VPS4B-205ENST00000591383 FANCAO15360 1455 aa9.98□□□□□ -0.81
VPS4B-205ENST00000591383 ARAP3Q8WWN8 1544 aa9.97□□□□□ -0.81
VPS4B-205ENST00000591383 NBR1Q14596 966 aa9.96□□□□□ -0.82
VPS4B-205ENST00000591383 NKX1-1Q15270 411 aaPredicted RBP9.96□□□□□ -0.82
VPS4B-205ENST00000591383 CCNB3Q8WWL7 1395 aa9.96□□□□□ -0.82
VPS4B-205ENST00000591383 KANK4Q5T7N3 995 aaPredicted RBP9.95□□□□□ -0.82
VPS4B-205ENST00000591383 DCAF8Q5TAQ9 597 aa9.95□□□□□ -0.82
VPS4B-205ENST00000591383 ABCC1P33527 1531 aa9.95□□□□□ -0.82
VPS4B-205ENST00000591383 SAMD9LQ8IVG5 1584 aa9.95□□□□□ -0.82
VPS4B-205ENST00000591383 NEO1Q92859 1461 aa9.94□□□□□ -0.82
VPS4B-205ENST00000591383 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
VPS4B-205ENST00000591383 SYCP2Q9BX26 1530 aa9.93□□□□□ -0.82
VPS4B-205ENST00000591383 GPATCH8Q9UKJ3 1502 aaKnown RBP9.93□□□□□ -0.82
VPS4B-205ENST00000591383 ADGRL1O94910 1474 aa9.93□□□□□ -0.82
VPS4B-205ENST00000591383 PLCH2O75038 1416 aa9.93□□□□□ -0.82
VPS4B-205ENST00000591383 FRMPD1Q5SYB0 1578 aa9.92□□□□□ -0.82
VPS4B-205ENST00000591383 CAMSAP2Q08AD1 1489 aa9.92□□□□□ -0.82
VPS4B-205ENST00000591383 GTPBP6O43824 516 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms