RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 CCNB3Q8WWL7 1395 aa32.5■■■□□ 2.79
ERCC2-212ENST00000591309 SCAPERQ9BY12 1400 aa32.49■■■□□ 2.79
ERCC2-212ENST00000591309 PREX2Q70Z35 1606 aa32.45■■■□□ 2.79
ERCC2-212ENST00000591309 ZNF777Q9ULD5 760 aaPredicted RBP32.45■■■□□ 2.79
ERCC2-212ENST00000591309 CFDP1Q9UEE9 299 aaPredicted RBP32.43■■■□□ 2.78
ERCC2-212ENST00000591309 CDC42BPBQ9Y5S2 1711 aa32.43■■■□□ 2.78
ERCC2-212ENST00000591309 MAP3K1Q13233 1512 aa32.41■■■□□ 2.78
ERCC2-212ENST00000591309 GPATCH8Q9UKJ3 1502 aaKnown RBP32.41■■■□□ 2.78
ERCC2-212ENST00000591309 CDC42BPAQ5VT25 1732 aa32.4■■■□□ 2.78
ERCC2-212ENST00000591309 SUPT6HQ7KZ85 1726 aaKnown RBP32.38■■■□□ 2.77
ERCC2-212ENST00000591309 LRRC9Q6ZRR7 1453 aa32.38■■■□□ 2.77
ERCC2-212ENST00000591309 AEBP2Q6ZN18 517 aaPredicted RBP32.38■■■□□ 2.77
ERCC2-212ENST00000591309 FRMPD1Q5SYB0 1578 aa32.37■■■□□ 2.77
ERCC2-212ENST00000591309 RICTORQ6R327 1708 aa32.37■■■□□ 2.77
ERCC2-212ENST00000591309 POGZQ7Z3K3 1410 aa32.36■■■□□ 2.77
ERCC2-212ENST00000591309 MYT1LQ9UL68 1186 aa32.36■■■□□ 2.77
ERCC2-212ENST00000591309 NCOA2Q15596 1464 aa32.34■■■□□ 2.77
ERCC2-212ENST00000591309 KANK4Q5T7N3 995 aaPredicted RBP32.33■■■□□ 2.77
ERCC2-212ENST00000591309 ZNF518AQ6AHZ1 1483 aa32.31■■■□□ 2.76
ERCC2-212ENST00000591309 ITSN2Q9NZM3 1697 aa32.3■■■□□ 2.76
ERCC2-212ENST00000591309 AFAP1Q8N556 730 aa32.29■■■□□ 2.76
ERCC2-212ENST00000591309 MAGI2Q86UL8 1455 aa32.29■■■□□ 2.76
ERCC2-212ENST00000591309 ZMYM4Q5VZL5 1548 aa32.28■■■□□ 2.76
ERCC2-212ENST00000591309 ABCC1P33527 1531 aa32.27■■■□□ 2.76
ERCC2-212ENST00000591309 PLEKHH2Q8IVE3 1493 aa32.27■■■□□ 2.76
ERCC2-212ENST00000591309 ZFYVE16Q7Z3T8 1539 aa32.25■■■□□ 2.75
ERCC2-212ENST00000591309 ARID4BQ4LE39 1312 aaPredicted RBP32.25■■■□□ 2.75
ERCC2-212ENST00000591309 HNRNPMP52272 730 aaKnown RBP eCLIP32.23■■■□□ 2.75
ERCC2-212ENST00000591309 SAMD9LQ8IVG5 1584 aa32.23■■■□□ 2.75
ERCC2-212ENST00000591309 ARHGEF40Q8TER5 1519 aa32.21■■■□□ 2.75
ERCC2-212ENST00000591309 KDM4FA0A1W2PPD8 638 aa32.21■■■□□ 2.75
ERCC2-212ENST00000591309 ARHGEF12Q9NZN5 1544 aa32.21■■■□□ 2.75
ERCC2-212ENST00000591309 TRAPPC8Q9Y2L5 1435 aa32.2■■■□□ 2.75
ERCC2-212ENST00000591309 KIAA1107Q9UPP5 1409 aa32.19■■■□□ 2.74
ERCC2-212ENST00000591309 YEATS2Q9ULM3 1422 aa32.18■■■□□ 2.74
ERCC2-212ENST00000591309 SYCP2Q9BX26 1530 aa32.18■■■□□ 2.74
ERCC2-212ENST00000591309 KDM5CP41229 1560 aa32.16■■■□□ 2.74
ERCC2-212ENST00000591309 ZNF644Q9H582 1327 aaPredicted RBP32.16■■■□□ 2.74
ERCC2-212ENST00000591309 HECW2Q9P2P5 1572 aa32.13■■■□□ 2.73
ERCC2-212ENST00000591309 SPAG9O60271 1321 aaKnown RBP32.12■■■□□ 2.73
ERCC2-212ENST00000591309 ATP10AO60312 1499 aa32.11■■■□□ 2.73
ERCC2-212ENST00000591309 MLH3Q9UHC1 1453 aa32.11■■■□□ 2.73
ERCC2-212ENST00000591309 MYOM3Q5VTT5 1437 aa32.09■■■□□ 2.73
ERCC2-212ENST00000591309 C9orf84Q5VXU9 1444 aa32.08■■■□□ 2.73
ERCC2-212ENST00000591309 RSPH4AQ5TD94 716 aa32.07■■■□□ 2.72
ERCC2-212ENST00000591309 CAMSAP2Q08AD1 1489 aa32.07■■■□□ 2.72
ERCC2-212ENST00000591309 MIA2Q96PC5 1412 aa32.05■■■□□ 2.72
ERCC2-212ENST00000591309 MBD5Q9P267 1494 aa32.01■■■□□ 2.71
ERCC2-212ENST00000591309 MLECQ14165 292 aa32■■■□□ 2.71
ERCC2-212ENST00000591309 DIP2CQ9Y2E4 1556 aa31.99■■■□□ 2.71
ERCC2-212ENST00000591309 TSPY4P0CV99 314 aa31.99■■■□□ 2.71
ERCC2-212ENST00000591309 TSPY10P0CW01 314 aa31.99■■■□□ 2.71
ERCC2-212ENST00000591309 CCDC141Q6ZP82 1450 aa31.98■■■□□ 2.71
ERCC2-212ENST00000591309 KIDINS220Q9ULH0 1771 aa31.97■■■□□ 2.71
ERCC2-212ENST00000591309 ABCA6Q8N139 1617 aa31.97■■■□□ 2.71
ERCC2-212ENST00000591309 ATP7AQ04656 1500 aa31.96■■■□□ 2.71
ERCC2-212ENST00000591309 BCORL1Q5H9F3 1711 aa31.95■■■□□ 2.71
ERCC2-212ENST00000591309 RTEL1-TNFRSF6BF6WH68 1400 aa31.91■■■□□ 2.7
ERCC2-212ENST00000591309 ARHGEF5Q12774 1597 aa31.9■■■□□ 2.7
ERCC2-212ENST00000591309 FGD6Q6ZV73 1430 aa31.9■■■□□ 2.7
ERCC2-212ENST00000591309 REREQ9P2R6 1566 aa31.9■■■□□ 2.7
ERCC2-212ENST00000591309 INO80Q9ULG1 1556 aaPredicted RBP31.9■■■□□ 2.7
ERCC2-212ENST00000591309 ADAMTSL3P82987 1691 aa31.89■■■□□ 2.7
ERCC2-212ENST00000591309 PPARGC1BQ86YN6 1023 aaKnown RBP31.87■■■□□ 2.69
ERCC2-212ENST00000591309 PTPN23Q9H3S7 1636 aa31.86■■■□□ 2.69
ERCC2-212ENST00000591309 SIGLEC1Q9BZZ2 1709 aa31.86■■■□□ 2.69
ERCC2-212ENST00000591309 ESF1Q9H501 851 aaKnown RBP31.84■■■□□ 2.69
ERCC2-212ENST00000591309 A2MP01023 1474 aa31.84■■■□□ 2.69
ERCC2-212ENST00000591309 MADDQ8WXG6 1647 aa31.83■■■□□ 2.69
ERCC2-212ENST00000591309 AGLP35573 1532 aa31.83■■■□□ 2.69
ERCC2-212ENST00000591309 FAM50AQ14320 339 aaKnown RBP31.81■■■□□ 2.68
ERCC2-212ENST00000591309 PTPRMP28827 1452 aa31.79■■■□□ 2.68
ERCC2-212ENST00000591309 ADGBQ8N7X0 1667 aa31.78■■■□□ 2.68
ERCC2-212ENST00000591309 TCOF1Q13428 1488 aaKnown RBP31.78■■■□□ 2.68
ERCC2-212ENST00000591309 PLPPR3Q6T4P5 718 aa31.77■■■□□ 2.68
ERCC2-212ENST00000591309 RIMS1Q86UR5 1692 aaKnown RBP31.76■■■□□ 2.68
ERCC2-212ENST00000591309 DHX29Q7Z478 1369 aaKnown RBP31.74■■■□□ 2.67
ERCC2-212ENST00000591309 FER1L4A9Z1Z3 1794 aa31.73■■■□□ 2.67
ERCC2-212ENST00000591309 MAST1Q9Y2H9 1570 aa31.72■■■□□ 2.67
ERCC2-212ENST00000591309 GGT6Q6P531 493 aa31.71■■■□□ 2.67
ERCC2-212ENST00000591309 ABCC5O15440 1437 aa31.71■■■□□ 2.67
ERCC2-212ENST00000591309 DAPK1P53355 1430 aa31.7■■■□□ 2.67
ERCC2-212ENST00000591309 PLXNC1O60486 1568 aa31.69■■■□□ 2.66
ERCC2-212ENST00000591309 KIF3BO15066 747 aa31.67■■■□□ 2.66
ERCC2-212ENST00000591309 DNMT1P26358 1616 aaKnown RBP31.67■■■□□ 2.66
ERCC2-212ENST00000591309 SHANK2Q9UPX8 1470 aa31.66■■■□□ 2.66
ERCC2-212ENST00000591309 CHIC2Q9UKJ5 165 aa31.64■■■□□ 2.66
ERCC2-212ENST00000591309 CNTLNQ9NXG0 1405 aa31.63■■■□□ 2.65
ERCC2-212ENST00000591309 CROCC2H7BZ55 1655 aa31.61■■■□□ 2.65
ERCC2-212ENST00000591309 RRP7BPQ9NSQ0 103 aa31.61■■■□□ 2.65
ERCC2-212ENST00000591309 PPP6R1Q9UPN7 881 aa31.61■■■□□ 2.65
ERCC2-212ENST00000591309 ANKRD30AQ9BXX3 1397 aa31.59■■■□□ 2.65
ERCC2-212ENST00000591309 KIF15Q9NS87 1388 aa31.58■■■□□ 2.65
ERCC2-212ENST00000591309 CEBPAP49715 358 aaPredicted RBP31.58■■■□□ 2.65
ERCC2-212ENST00000591309 DUOX2Q9NRD8 1548 aa31.55■■■□□ 2.64
ERCC2-212ENST00000591309 ITGAEP38570 1179 aa31.52■■■□□ 2.64
ERCC2-212ENST00000591309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.5■■■□□ 2.63
ERCC2-212ENST00000591309 WASHC2CQ9Y4E1 1318 aa31.49■■■□□ 2.63
ERCC2-212ENST00000591309 ZMYM3Q14202 1370 aa31.48■■■□□ 2.63
ERCC2-212ENST00000591309 NCOA1Q15788 1441 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms