RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-212ENST00000591107 RIMS1Q86UR5 1692 aaKnown RBP22.02■■□□□ 1.12
NPC1-212ENST00000591107 ARID4BQ4LE39 1312 aaPredicted RBP22.02■■□□□ 1.12
NPC1-212ENST00000591107 HECW1Q76N89 1606 aa22.02■■□□□ 1.11
NPC1-212ENST00000591107 UBTFP17480 764 aaKnown RBP22.01■■□□□ 1.11
NPC1-212ENST00000591107 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
NPC1-212ENST00000591107 KIF14Q15058 1648 aa22■■□□□ 1.11
NPC1-212ENST00000591107 YEATS2Q9ULM3 1422 aa21.99■■□□□ 1.11
NPC1-212ENST00000591107 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
NPC1-212ENST00000591107 LRRIQ1Q96JM4 1722 aa21.99■■□□□ 1.11
NPC1-212ENST00000591107 ZMYM4Q5VZL5 1548 aa21.98■■□□□ 1.11
NPC1-212ENST00000591107 ZFYVE16Q7Z3T8 1539 aa21.97■■□□□ 1.11
NPC1-212ENST00000591107 MYO5CQ9NQX4 1742 aa21.94■■□□□ 1.1
NPC1-212ENST00000591107 FMN1Q68DA7 1419 aa21.93■■□□□ 1.1
NPC1-212ENST00000591107 POGZQ7Z3K3 1410 aa21.91■■□□□ 1.1
NPC1-212ENST00000591107 PCF11O94913 1555 aaKnown RBP21.91■■□□□ 1.1
NPC1-212ENST00000591107 PLCH2O75038 1416 aa21.89■■□□□ 1.1
NPC1-212ENST00000591107 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.1
NPC1-212ENST00000591107 LMTK3Q96Q04 1460 aa21.89■■□□□ 1.09
NPC1-212ENST00000591107 MLECQ14165 292 aa21.86■■□□□ 1.09
NPC1-212ENST00000591107 FER1L4A9Z1Z3 1794 aa21.86■■□□□ 1.09
NPC1-212ENST00000591107 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
NPC1-212ENST00000591107 TROQ12816 1431 aaPredicted RBP21.83■■□□□ 1.09
NPC1-212ENST00000591107 MAGI2Q86UL8 1455 aa21.8■■□□□ 1.08
NPC1-212ENST00000591107 CNKSR2Q8WXI2 1034 aa21.8■■□□□ 1.08
NPC1-212ENST00000591107 HSPA2P54652 639 aa21.79■■□□□ 1.08
NPC1-212ENST00000591107 CDC42BPBQ9Y5S2 1711 aa21.78■■□□□ 1.08
NPC1-212ENST00000591107 NPM3O75607 178 aaKnown RBP21.77■■□□□ 1.08
NPC1-212ENST00000591107 CLIP1P30622 1438 aa21.77■■□□□ 1.08
NPC1-212ENST00000591107 C9orf84Q5VXU9 1444 aa21.77■■□□□ 1.08
NPC1-212ENST00000591107 KDM5CP41229 1560 aa21.76■■□□□ 1.07
NPC1-212ENST00000591107 PREX2Q70Z35 1606 aa21.76■■□□□ 1.07
NPC1-212ENST00000591107 EFCAB2Q5VUJ9 269 aa21.75■■□□□ 1.07
NPC1-212ENST00000591107 ARHGEF12Q9NZN5 1544 aa21.75■■□□□ 1.07
NPC1-212ENST00000591107 DIP2CQ9Y2E4 1556 aa21.74■■□□□ 1.07
NPC1-212ENST00000591107 ABCA6Q8N139 1617 aa21.74■■□□□ 1.07
NPC1-212ENST00000591107 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
NPC1-212ENST00000591107 ATP10AO60312 1499 aa21.74■■□□□ 1.07
NPC1-212ENST00000591107 ZNF518AQ6AHZ1 1483 aa21.73■■□□□ 1.07
NPC1-212ENST00000591107 CASKIN1Q8WXD9 1431 aa21.72■■□□□ 1.07
NPC1-212ENST00000591107 ITSN2Q9NZM3 1697 aa21.72■■□□□ 1.07
NPC1-212ENST00000591107 ABCC1P33527 1531 aa21.71■■□□□ 1.07
NPC1-212ENST00000591107 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
NPC1-212ENST00000591107 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
NPC1-212ENST00000591107 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
NPC1-212ENST00000591107 TRAPPC8Q9Y2L5 1435 aa21.68■■□□□ 1.06
NPC1-212ENST00000591107 MYT1LQ9UL68 1186 aa21.67■■□□□ 1.06
NPC1-212ENST00000591107 CEBPAP49715 358 aaPredicted RBP21.66■■□□□ 1.06
NPC1-212ENST00000591107 FYCO1Q9BQS8 1478 aa21.65■■□□□ 1.06
NPC1-212ENST00000591107 SLC4A1APQ9BWU0 796 aaKnown RBP21.65■■□□□ 1.06
NPC1-212ENST00000591107 PREX1Q8TCU6 1659 aa21.64■■□□□ 1.05
NPC1-212ENST00000591107 FBXO41Q8TF61 875 aa21.63■■□□□ 1.05
NPC1-212ENST00000591107 SAMD9LQ8IVG5 1584 aa21.62■■□□□ 1.05
NPC1-212ENST00000591107 KIDINS220Q9ULH0 1771 aa21.61■■□□□ 1.05
NPC1-212ENST00000591107 SYCP2Q9BX26 1530 aa21.6■■□□□ 1.05
NPC1-212ENST00000591107 MAPK8IP2Q13387 824 aaPredicted RBP21.6■■□□□ 1.05
NPC1-212ENST00000591107 REREQ9P2R6 1566 aa21.6■■□□□ 1.05
NPC1-212ENST00000591107 MLH3Q9UHC1 1453 aa21.59■■□□□ 1.05
NPC1-212ENST00000591107 C3P01024 1663 aa21.58■■□□□ 1.05
NPC1-212ENST00000591107 ZNF777Q9ULD5 760 aaPredicted RBP21.56■■□□□ 1.04
NPC1-212ENST00000591107 GPATCH8Q9UKJ3 1502 aaKnown RBP21.54■■□□□ 1.04
NPC1-212ENST00000591107 AGLP35573 1532 aa21.52■■□□□ 1.04
NPC1-212ENST00000591107 STRCQ7RTU9 1775 aa21.51■■□□□ 1.03
NPC1-212ENST00000591107 UHRF1BP1Q6BDS2 1440 aa21.5■■□□□ 1.03
NPC1-212ENST00000591107 SUPT6HQ7KZ85 1726 aaKnown RBP21.49■■□□□ 1.03
NPC1-212ENST00000591107 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
NPC1-212ENST00000591107 ATP7AQ04656 1500 aa21.47■■□□□ 1.03
NPC1-212ENST00000591107 TIAM1Q13009 1591 aa21.46■■□□□ 1.03
NPC1-212ENST00000591107 HNRNPMP52272 730 aaKnown RBP eCLIP21.46■■□□□ 1.03
NPC1-212ENST00000591107 MTUS2Q5JR59 1369 aa21.43■■□□□ 1.02
NPC1-212ENST00000591107 CCNB3Q8WWL7 1395 aa21.43■■□□□ 1.02
NPC1-212ENST00000591107 SPAG9O60271 1321 aaKnown RBP21.42■■□□□ 1.02
NPC1-212ENST00000591107 PLXNC1O60486 1568 aa21.42■■□□□ 1.02
NPC1-212ENST00000591107 CERKQ8TCT0 537 aa21.42■■□□□ 1.02
NPC1-212ENST00000591107 CLTCQ00610 1675 aaKnown RBP21.41■■□□□ 1.02
NPC1-212ENST00000591107 EHBP1L1Q8N3D4 1523 aa21.41■■□□□ 1.02
NPC1-212ENST00000591107 ESF1Q9H501 851 aaKnown RBP21.41■■□□□ 1.02
NPC1-212ENST00000591107 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
NPC1-212ENST00000591107 CFDP1Q9UEE9 299 aaPredicted RBP21.4■■□□□ 1.02
NPC1-212ENST00000591107 ZNF644Q9H582 1327 aaPredicted RBP21.39■■□□□ 1.01
NPC1-212ENST00000591107 MROH2AA6NES4 1674 aa21.38■■□□□ 1.01
NPC1-212ENST00000591107 SETD1BQ9UPS6 1966 aaKnown RBP21.36■■□□□ 1.01
NPC1-212ENST00000591107 A2MP01023 1474 aa21.36■■□□□ 1.01
NPC1-212ENST00000591107 PLEKHH2Q8IVE3 1493 aa21.36■■□□□ 1.01
NPC1-212ENST00000591107 CNTLNQ9NXG0 1405 aa21.36■■□□□ 1.01
NPC1-212ENST00000591107 KIAA1107Q9UPP5 1409 aa21.36■■□□□ 1.01
NPC1-212ENST00000591107 MYO3AQ8NEV4 1616 aa21.34■■□□□ 1.01
NPC1-212ENST00000591107 NCOA1Q15788 1441 aa21.32■■□□□ 1
NPC1-212ENST00000591107 ADGBQ8N7X0 1667 aa21.32■■□□□ 1
NPC1-212ENST00000591107 CAMSAP1Q5T5Y3 1602 aa21.32■■□□□ 1
NPC1-212ENST00000591107 MBD5Q9P267 1494 aa21.31■■□□□ 1
NPC1-212ENST00000591107 ZMYM3Q14202 1370 aa21.3■■□□□ 1
NPC1-212ENST00000591107 NCOA2Q15596 1464 aa21.28■■□□□ 1
NPC1-212ENST00000591107 GGT6Q6P531 493 aa21.28■■□□□ 1
NPC1-212ENST00000591107 NPATQ14207 1427 aa21.28■■□□□ 1
NPC1-212ENST00000591107 ZNF142P52746 1687 aaPredicted RBP21.28■■□□□ 1
NPC1-212ENST00000591107 CAMSAP2Q08AD1 1489 aa21.27■■□□□ 1
NPC1-212ENST00000591107 PTPRTO14522 1441 aa21.27■■□□□ 1
NPC1-212ENST00000591107 LTBP4Q8N2S1 1624 aa21.26■□□□□ 0.99
NPC1-212ENST00000591107 CEP170BQ9Y4F5 1589 aaPredicted RBP21.26■□□□□ 0.99
NPC1-212ENST00000591107 PTPRKQ15262 1439 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms