RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 GPATCH8Q9UKJ3 1502 aaKnown RBP15.43■□□□□ 0.06
RANBP3-219ENST00000590953 PREX2Q70Z35 1606 aa15.42■□□□□ 0.06
RANBP3-219ENST00000590953 CDC42BPAQ5VT25 1732 aa15.41■□□□□ 0.06
RANBP3-219ENST00000590953 AKNAQ7Z591 1439 aa15.41■□□□□ 0.06
RANBP3-219ENST00000590953 CFDP1Q9UEE9 299 aaPredicted RBP15.4■□□□□ 0.06
RANBP3-219ENST00000590953 CDC42BPBQ9Y5S2 1711 aa15.4■□□□□ 0.06
RANBP3-219ENST00000590953 KDM6BO15054 1643 aa15.39■□□□□ 0.05
RANBP3-219ENST00000590953 ITSN2Q9NZM3 1697 aa15.39■□□□□ 0.05
RANBP3-219ENST00000590953 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
RANBP3-219ENST00000590953 ZNF777Q9ULD5 760 aaPredicted RBP15.35■□□□□ 0.05
RANBP3-219ENST00000590953 MYOM3Q5VTT5 1437 aa15.34■□□□□ 0.05
RANBP3-219ENST00000590953 SCAPERQ9BY12 1400 aa15.34■□□□□ 0.05
RANBP3-219ENST00000590953 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
RANBP3-219ENST00000590953 COL17A1Q9UMD9 1497 aaPredicted RBP15.34■□□□□ 0.05
RANBP3-219ENST00000590953 PLEKHH2Q8IVE3 1493 aa15.33■□□□□ 0.05
RANBP3-219ENST00000590953 MIA2Q96PC5 1412 aa15.33■□□□□ 0.04
RANBP3-219ENST00000590953 ABCC1P33527 1531 aa15.32■□□□□ 0.04
RANBP3-219ENST00000590953 SAMD9LQ8IVG5 1584 aa15.32■□□□□ 0.04
RANBP3-219ENST00000590953 RAPGEF3O95398 923 aa15.31■□□□□ 0.04
RANBP3-219ENST00000590953 PPARGC1BQ86YN6 1023 aaKnown RBP15.31■□□□□ 0.04
RANBP3-219ENST00000590953 KIAA1107Q9UPP5 1409 aa15.31■□□□□ 0.04
RANBP3-219ENST00000590953 POGZQ7Z3K3 1410 aa15.29■□□□□ 0.04
RANBP3-219ENST00000590953 ZNF518AQ6AHZ1 1483 aa15.28■□□□□ 0.04
RANBP3-219ENST00000590953 ZNF644Q9H582 1327 aaPredicted RBP15.28■□□□□ 0.04
RANBP3-219ENST00000590953 RICTORQ6R327 1708 aa15.28■□□□□ 0.04
RANBP3-219ENST00000590953 SYCP2Q9BX26 1530 aa15.27■□□□□ 0.04
RANBP3-219ENST00000590953 ARHGEF12Q9NZN5 1544 aa15.27■□□□□ 0.04
RANBP3-219ENST00000590953 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
RANBP3-219ENST00000590953 FGD6Q6ZV73 1430 aa15.27■□□□□ 0.04
RANBP3-219ENST00000590953 HNRNPMP52272 730 aaKnown RBP eCLIP15.27■□□□□ 0.047e-7■■■□□ 15.5
RANBP3-219ENST00000590953 RSPH4AQ5TD94 716 aa15.27■□□□□ 0.04
RANBP3-219ENST00000590953 FRMPD1Q5SYB0 1578 aa15.26■□□□□ 0.03
RANBP3-219ENST00000590953 AFAP1Q8N556 730 aa15.25■□□□□ 0.03
RANBP3-219ENST00000590953 TRAPPC8Q9Y2L5 1435 aa15.25■□□□□ 0.03
RANBP3-219ENST00000590953 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
RANBP3-219ENST00000590953 ZMYM4Q5VZL5 1548 aa15.24■□□□□ 0.03
RANBP3-219ENST00000590953 MAGI2Q86UL8 1455 aa15.24■□□□□ 0.03
RANBP3-219ENST00000590953 MBD5Q9P267 1494 aa15.24■□□□□ 0.03
RANBP3-219ENST00000590953 TCOF1Q13428 1488 aaKnown RBP15.23■□□□□ 0.03
RANBP3-219ENST00000590953 KDM5CP41229 1560 aa15.23■□□□□ 0.03
RANBP3-219ENST00000590953 MYT1LQ9UL68 1186 aa15.22■□□□□ 0.03
RANBP3-219ENST00000590953 CCDC141Q6ZP82 1450 aa15.21■□□□□ 0.03
RANBP3-219ENST00000590953 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.03
RANBP3-219ENST00000590953 MLH3Q9UHC1 1453 aa15.2■□□□□ 0.02
RANBP3-219ENST00000590953 SPAG9O60271 1321 aaKnown RBP15.2■□□□□ 0.02
RANBP3-219ENST00000590953 TSPY4P0CV99 314 aa15.2■□□□□ 0.02
RANBP3-219ENST00000590953 TSPY10P0CW01 314 aa15.2■□□□□ 0.02
RANBP3-219ENST00000590953 HECW2Q9P2P5 1572 aa15.19■□□□□ 0.02
RANBP3-219ENST00000590953 ZFYVE16Q7Z3T8 1539 aa15.19■□□□□ 0.02
RANBP3-219ENST00000590953 FAM50AQ14320 339 aaKnown RBP15.19■□□□□ 0.02
RANBP3-219ENST00000590953 ARHGEF40Q8TER5 1519 aa15.17■□□□□ 0.02
RANBP3-219ENST00000590953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.17■□□□□ 0.02
RANBP3-219ENST00000590953 RTEL1-TNFRSF6BF6WH68 1400 aa15.17■□□□□ 0.02
RANBP3-219ENST00000590953 RRBP1Q9P2E9 1410 aaKnown RBP15.16■□□□□ 0.02
RANBP3-219ENST00000590953 YEATS2Q9ULM3 1422 aa15.16■□□□□ 0.02
RANBP3-219ENST00000590953 ATP7AQ04656 1500 aa15.15■□□□□ 0.02
RANBP3-219ENST00000590953 DNMT1P26358 1616 aaKnown RBP15.14■□□□□ 0.01
RANBP3-219ENST00000590953 KIDINS220Q9ULH0 1771 aa15.14■□□□□ 0.01
RANBP3-219ENST00000590953 ABCC5O15440 1437 aa15.14■□□□□ 0.01
RANBP3-219ENST00000590953 DAPK1P53355 1430 aa15.14■□□□□ 0.01
RANBP3-219ENST00000590953 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
RANBP3-219ENST00000590953 ATP10AO60312 1499 aa15.14■□□□□ 0.01
RANBP3-219ENST00000590953 SHANK2Q9UPX8 1470 aa15.13■□□□□ 0.01
RANBP3-219ENST00000590953 MAST1Q9Y2H9 1570 aa15.12■□□□□ 0.01
RANBP3-219ENST00000590953 C9orf84Q5VXU9 1444 aa15.12■□□□□ 0.01
RANBP3-219ENST00000590953 DIP2CQ9Y2E4 1556 aa15.11■□□□□ 0.01
RANBP3-219ENST00000590953 ABCA6Q8N139 1617 aa15.11■□□□□ 0.01
RANBP3-219ENST00000590953 CROCC2H7BZ55 1655 aa15.1■□□□□ 0.01
RANBP3-219ENST00000590953 REREQ9P2R6 1566 aa15.09■□□□□ 0.01
RANBP3-219ENST00000590953 ARID4BQ4LE39 1312 aaPredicted RBP15.08■□□□□ 0
RANBP3-219ENST00000590953 A2MP01023 1474 aa15.08■□□□□ 0
RANBP3-219ENST00000590953 ADGBQ8N7X0 1667 aa15.07■□□□□ 0
RANBP3-219ENST00000590953 CHIC2Q9UKJ5 165 aa15.07■□□□□ 0
RANBP3-219ENST00000590953 ANKRD30AQ9BXX3 1397 aa15.07■□□□□ 0
RANBP3-219ENST00000590953 ITGAEP38570 1179 aa15.06■□□□□ 0
RANBP3-219ENST00000590953 DHX29Q7Z478 1369 aaKnown RBP15.06■□□□□ 0
RANBP3-219ENST00000590953 PLXNC1O60486 1568 aa15.06■□□□□ 0
RANBP3-219ENST00000590953 ADGRL2O95490 1459 aa15.05■□□□□ -0
RANBP3-219ENST00000590953 AGLP35573 1532 aa15.05■□□□□ -0
RANBP3-219ENST00000590953 KIF15Q9NS87 1388 aa15.04■□□□□ -0
RANBP3-219ENST00000590953 PTPRKQ15262 1439 aa15.03■□□□□ -0
RANBP3-219ENST00000590953 NCOA1Q15788 1441 aa15.03■□□□□ -0
RANBP3-219ENST00000590953 RRP7BPQ9NSQ0 103 aa15.03■□□□□ -0
RANBP3-219ENST00000590953 DUOX2Q9NRD8 1548 aa15.02■□□□□ -0
RANBP3-219ENST00000590953 ROCK1Q13464 1354 aa15.02■□□□□ -0
RANBP3-219ENST00000590953 SIGLEC1Q9BZZ2 1709 aa15□□□□□ -0.01
RANBP3-219ENST00000590953 MLECQ14165 292 aa14.99□□□□□ -0.01
RANBP3-219ENST00000590953 BCORL1Q5H9F3 1711 aa14.99□□□□□ -0.01
RANBP3-219ENST00000590953 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
RANBP3-219ENST00000590953 KIF3BO15066 747 aa14.98□□□□□ -0.01
RANBP3-219ENST00000590953 EIF2AK4Q9P2K8 1649 aaKnown RBP14.96□□□□□ -0.01
RANBP3-219ENST00000590953 GGT6Q6P531 493 aa14.96□□□□□ -0.01
RANBP3-219ENST00000590953 ANKRD50Q9ULJ7 1429 aa14.95□□□□□ -0.02
RANBP3-219ENST00000590953 KDM4FA0A1W2PPD8 638 aa14.95□□□□□ -0.02
RANBP3-219ENST00000590953 ESF1Q9H501 851 aaKnown RBP14.95□□□□□ -0.02
RANBP3-219ENST00000590953 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
RANBP3-219ENST00000590953 ADAMTSL3P82987 1691 aa14.95□□□□□ -0.02
RANBP3-219ENST00000590953 CNTLNQ9NXG0 1405 aa14.92□□□□□ -0.02
RANBP3-219ENST00000590953 MADDQ8WXG6 1647 aa14.91□□□□□ -0.02
RANBP3-219ENST00000590953 RNF17Q9BXT8 1623 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms