RNA–Protein interactions for RNA: ENST00000590852.1

BECN1-216, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-216ENST00000590852 STK24Q9Y6E0 443 aa12.18□□□□□ -0.46
BECN1-216ENST00000590852 STK25O00506 426 aa12.16□□□□□ -0.46
BECN1-216ENST00000590852 MICALL2Q8IY33 904 aa12.15□□□□□ -0.46
BECN1-216ENST00000590852 FBXO22Q8NEZ5 403 aa12.15□□□□□ -0.46
BECN1-216ENST00000590852 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
BECN1-216ENST00000590852 NLRP6P59044 892 aa12.12□□□□□ -0.47
BECN1-216ENST00000590852 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
BECN1-216ENST00000590852 SMARCA4P51532 1647 aa12.11□□□□□ -0.47
BECN1-216ENST00000590852 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
BECN1-216ENST00000590852 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
BECN1-216ENST00000590852 TMEM92Q6UXU6 159 aa12.09□□□□□ -0.47
BECN1-216ENST00000590852 CDAN1Q8IWY9 1227 aa12.08□□□□□ -0.48
BECN1-216ENST00000590852 MARVELD3Q96A59 401 aa12.08□□□□□ -0.48
BECN1-216ENST00000590852 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
BECN1-216ENST00000590852 SMARCA2P51531 1590 aa12.02□□□□□ -0.49
BECN1-216ENST00000590852 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
BECN1-216ENST00000590852 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
BECN1-216ENST00000590852 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
BECN1-216ENST00000590852 NESP48681 1621 aa11.99□□□□□ -0.49
BECN1-216ENST00000590852 EMP3P54852 163 aa11.98□□□□□ -0.49
BECN1-216ENST00000590852 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
BECN1-216ENST00000590852 BAZ1BQ9UIG0 1483 aaKnown RBP11.97□□□□□ -0.49
BECN1-216ENST00000590852 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
BECN1-216ENST00000590852 ERCC6Q03468 1493 aa11.96□□□□□ -0.49
BECN1-216ENST00000590852 POTEB3A0JP26 581 aa11.95□□□□□ -0.5
BECN1-216ENST00000590852 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
BECN1-216ENST00000590852 POTEBQ6S5H4 581 aa11.95□□□□□ -0.5
BECN1-216ENST00000590852 PEG3Q9GZU2 1588 aa11.95□□□□□ -0.5
BECN1-216ENST00000590852 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
BECN1-216ENST00000590852 FAM205CA6NFA0 338 aa11.92□□□□□ -0.5
BECN1-216ENST00000590852 KIF3CO14782 793 aa11.92□□□□□ -0.5
BECN1-216ENST00000590852 PPP1R37O75864 691 aa11.92□□□□□ -0.5
BECN1-216ENST00000590852 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
BECN1-216ENST00000590852 RIMBP2O15034 1052 aa11.89□□□□□ -0.51
BECN1-216ENST00000590852 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
BECN1-216ENST00000590852 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
BECN1-216ENST00000590852 CUX2O14529 1486 aa11.89□□□□□ -0.51
BECN1-216ENST00000590852 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
BECN1-216ENST00000590852 GPR153Q6NV75 609 aa11.87□□□□□ -0.51
BECN1-216ENST00000590852 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
BECN1-216ENST00000590852 WIZO95785 1651 aa11.86□□□□□ -0.51
BECN1-216ENST00000590852 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
BECN1-216ENST00000590852 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
BECN1-216ENST00000590852 KRTAP3-3Q9BYR6 98 aa11.83□□□□□ -0.52
BECN1-216ENST00000590852 KRTAP3-2Q9BYR7 98 aa11.83□□□□□ -0.52
BECN1-216ENST00000590852 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
BECN1-216ENST00000590852 LAMC3Q9Y6N6 1575 aa11.81□□□□□ -0.52
BECN1-216ENST00000590852 ERBB3P21860 1342 aa11.81□□□□□ -0.52
BECN1-216ENST00000590852 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
BECN1-216ENST00000590852 ARSIQ5FYB1 569 aa11.79□□□□□ -0.52
BECN1-216ENST00000590852 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
BECN1-216ENST00000590852 VARS2Q5ST30 1063 aaKnown RBP11.76□□□□□ -0.53
BECN1-216ENST00000590852 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.53
BECN1-216ENST00000590852 SLC34A2O95436 690 aa11.74□□□□□ -0.53
BECN1-216ENST00000590852 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
BECN1-216ENST00000590852 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
BECN1-216ENST00000590852 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
BECN1-216ENST00000590852 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
BECN1-216ENST00000590852 GPHNQ9NQX3 736 aaPredicted RBP11.7□□□□□ -0.54
BECN1-216ENST00000590852 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
BECN1-216ENST00000590852 ZNF687Q8N1G0 1237 aa11.69□□□□□ -0.54
BECN1-216ENST00000590852 PCDHGA4Q9Y5G9 962 aa11.69□□□□□ -0.54
BECN1-216ENST00000590852 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
BECN1-216ENST00000590852 FOXK1P85037 733 aa11.68□□□□□ -0.54
BECN1-216ENST00000590852 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
BECN1-216ENST00000590852 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
BECN1-216ENST00000590852 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
BECN1-216ENST00000590852 NUDT7P0C024 238 aa11.66□□□□□ -0.54
BECN1-216ENST00000590852 WDR62O43379 1518 aa11.65□□□□□ -0.55
BECN1-216ENST00000590852 DSG2Q14126 1118 aa11.64□□□□□ -0.55
BECN1-216ENST00000590852 PLPP6Q8IY26 295 aa11.64□□□□□ -0.55
BECN1-216ENST00000590852 PTCD2Q8WV60 388 aaKnown RBP11.63□□□□□ -0.55
BECN1-216ENST00000590852 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
BECN1-216ENST00000590852 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
BECN1-216ENST00000590852 KDM4FA0A1W2PPD8 638 aa11.62□□□□□ -0.55
BECN1-216ENST00000590852 CFTRP13569 1480 aa11.61□□□□□ -0.55
BECN1-216ENST00000590852 CRISPLD2Q9H0B8 497 aa11.6□□□□□ -0.55
BECN1-216ENST00000590852 LHX6Q9UPM6 363 aa11.6□□□□□ -0.55
BECN1-216ENST00000590852 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
BECN1-216ENST00000590852 URB2Q14146 1524 aaKnown RBP11.57□□□□□ -0.56
BECN1-216ENST00000590852 NCKAP5LQ9HCH0 1330 aa11.57□□□□□ -0.56
BECN1-216ENST00000590852 CCDC88BA6NC98 1476 aa11.54□□□□□ -0.56
BECN1-216ENST00000590852 POTEEQ6S8J3 1075 aa11.53□□□□□ -0.56
BECN1-216ENST00000590852 PDE4AP27815 886 aa11.51□□□□□ -0.57
BECN1-216ENST00000590852 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
BECN1-216ENST00000590852 OXER1Q8TDS5 423 aa11.51□□□□□ -0.57
BECN1-216ENST00000590852 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
BECN1-216ENST00000590852 PBX2P40425 430 aa11.5□□□□□ -0.57
BECN1-216ENST00000590852 PSDA5PKW4 1024 aaPredicted RBP11.49□□□□□ -0.57
BECN1-216ENST00000590852 TBC1D12O60347 775 aa11.49□□□□□ -0.57
BECN1-216ENST00000590852 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
BECN1-216ENST00000590852 ANKRD13DQ6ZTN6 518 aa11.48□□□□□ -0.57
BECN1-216ENST00000590852 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
BECN1-216ENST00000590852 MFSD10Q14728 455 aa11.45□□□□□ -0.58
BECN1-216ENST00000590852 LARP6Q9BRS8 491 aaKnown RBP11.45□□□□□ -0.58
BECN1-216ENST00000590852 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
BECN1-216ENST00000590852 PTGER2P43116 358 aa11.44□□□□□ -0.58
BECN1-216ENST00000590852 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
BECN1-216ENST00000590852 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
BECN1-216ENST00000590852 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms