RNA–Protein interactions for RNA: ENST00000590654.1

GALNT1-204, Transcript of polypeptide N-acetylgalactosaminyltransferase 1, humanhuman

TSL 5

Gene GALNT1, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GALNT1-204ENST00000590654 TTC37Q6PGP7 1564 aa13.54□□□□□ -0.24
GALNT1-204ENST00000590654 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
GALNT1-204ENST00000590654 GPATCH8Q9UKJ3 1502 aaKnown RBP13.54□□□□□ -0.24
GALNT1-204ENST00000590654 NCOA2Q15596 1464 aa13.54□□□□□ -0.24
GALNT1-204ENST00000590654 MIA2Q96PC5 1412 aa13.52□□□□□ -0.24
GALNT1-204ENST00000590654 KIAA1107Q9UPP5 1409 aa13.52□□□□□ -0.24
GALNT1-204ENST00000590654 DENND4BO75064 1496 aaPredicted RBP13.52□□□□□ -0.25
GALNT1-204ENST00000590654 KDM6BO15054 1643 aa13.52□□□□□ -0.25
GALNT1-204ENST00000590654 PPRC1Q5VV67 1664 aaKnown RBP13.51□□□□□ -0.25
GALNT1-204ENST00000590654 ADGRL1O94910 1474 aa13.5□□□□□ -0.25
GALNT1-204ENST00000590654 SCAPERQ9BY12 1400 aa13.5□□□□□ -0.25
GALNT1-204ENST00000590654 ZNF777Q9ULD5 760 aaPredicted RBP13.5□□□□□ -0.25
GALNT1-204ENST00000590654 ITSN2Q9NZM3 1697 aa13.49□□□□□ -0.25
GALNT1-204ENST00000590654 PREX2Q70Z35 1606 aa13.49□□□□□ -0.25
GALNT1-204ENST00000590654 MAGI2Q86UL8 1455 aa13.49□□□□□ -0.25
GALNT1-204ENST00000590654 MYOM3Q5VTT5 1437 aa13.48□□□□□ -0.25
GALNT1-204ENST00000590654 ZNF518AQ6AHZ1 1483 aa13.48□□□□□ -0.25
GALNT1-204ENST00000590654 RAPGEF3O95398 923 aa13.46□□□□□ -0.25
GALNT1-204ENST00000590654 TSPY4P0CV99 314 aa13.46□□□□□ -0.25
GALNT1-204ENST00000590654 TSPY10P0CW01 314 aa13.46□□□□□ -0.25
GALNT1-204ENST00000590654 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
GALNT1-204ENST00000590654 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
GALNT1-204ENST00000590654 POGZQ7Z3K3 1410 aa13.44□□□□□ -0.26
GALNT1-204ENST00000590654 COL17A1Q9UMD9 1497 aaPredicted RBP13.44□□□□□ -0.26
GALNT1-204ENST00000590654 MYT1LQ9UL68 1186 aa13.43□□□□□ -0.26
GALNT1-204ENST00000590654 HNRNPMP52272 730 aaKnown RBP eCLIP13.42□□□□□ -0.26
GALNT1-204ENST00000590654 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
GALNT1-204ENST00000590654 SPAG9O60271 1321 aaKnown RBP13.42□□□□□ -0.26
GALNT1-204ENST00000590654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.41□□□□□ -0.26
GALNT1-204ENST00000590654 ABCC1P33527 1531 aa13.4□□□□□ -0.26
GALNT1-204ENST00000590654 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
GALNT1-204ENST00000590654 FGD6Q6ZV73 1430 aa13.4□□□□□ -0.26
GALNT1-204ENST00000590654 MLH3Q9UHC1 1453 aa13.4□□□□□ -0.26
GALNT1-204ENST00000590654 ZMYM4Q5VZL5 1548 aa13.4□□□□□ -0.26
GALNT1-204ENST00000590654 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
GALNT1-204ENST00000590654 CAMSAP2Q08AD1 1489 aa13.37□□□□□ -0.27
GALNT1-204ENST00000590654 SAMD9LQ8IVG5 1584 aa13.37□□□□□ -0.27
GALNT1-204ENST00000590654 CCDC141Q6ZP82 1450 aa13.37□□□□□ -0.27
GALNT1-204ENST00000590654 MBD5Q9P267 1494 aa13.37□□□□□ -0.27
GALNT1-204ENST00000590654 KDM5CP41229 1560 aa13.36□□□□□ -0.27
GALNT1-204ENST00000590654 TRAPPC8Q9Y2L5 1435 aa13.36□□□□□ -0.27
GALNT1-204ENST00000590654 RICTORQ6R327 1708 aa13.36□□□□□ -0.27
GALNT1-204ENST00000590654 ARHGEF5Q12774 1597 aa13.36□□□□□ -0.27
GALNT1-204ENST00000590654 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
GALNT1-204ENST00000590654 FAM50AQ14320 339 aaKnown RBP13.35□□□□□ -0.27
GALNT1-204ENST00000590654 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
GALNT1-204ENST00000590654 ATP10AO60312 1499 aa13.35□□□□□ -0.27
GALNT1-204ENST00000590654 ARHGEF12Q9NZN5 1544 aa13.34□□□□□ -0.27
GALNT1-204ENST00000590654 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
GALNT1-204ENST00000590654 PPP6R1Q9UPN7 881 aa13.33□□□□□ -0.28
GALNT1-204ENST00000590654 PTPN23Q9H3S7 1636 aa13.33□□□□□ -0.28
GALNT1-204ENST00000590654 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
GALNT1-204ENST00000590654 ARID4BQ4LE39 1312 aaPredicted RBP13.32□□□□□ -0.28
GALNT1-204ENST00000590654 FRMPD1Q5SYB0 1578 aa13.32□□□□□ -0.28
GALNT1-204ENST00000590654 C9orf84Q5VXU9 1444 aa13.31□□□□□ -0.28
GALNT1-204ENST00000590654 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
GALNT1-204ENST00000590654 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
GALNT1-204ENST00000590654 ANKRD30AQ9BXX3 1397 aa13.3□□□□□ -0.28
GALNT1-204ENST00000590654 ACIN1Q9UKV3 1341 aaKnown RBP13.3□□□□□ -0.28
GALNT1-204ENST00000590654 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
GALNT1-204ENST00000590654 ARHGEF40Q8TER5 1519 aa13.3□□□□□ -0.28
GALNT1-204ENST00000590654 ATP7AQ04656 1500 aa13.28□□□□□ -0.28
GALNT1-204ENST00000590654 REREQ9P2R6 1566 aa13.28□□□□□ -0.28
GALNT1-204ENST00000590654 DAPK1P53355 1430 aa13.28□□□□□ -0.28
GALNT1-204ENST00000590654 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.28
GALNT1-204ENST00000590654 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.28
GALNT1-204ENST00000590654 ABCC5O15440 1437 aa13.27□□□□□ -0.28
GALNT1-204ENST00000590654 YEATS2Q9ULM3 1422 aa13.27□□□□□ -0.28
GALNT1-204ENST00000590654 MAST1Q9Y2H9 1570 aa13.26□□□□□ -0.29
GALNT1-204ENST00000590654 ROCK1Q13464 1354 aa13.26□□□□□ -0.29
GALNT1-204ENST00000590654 AGLP35573 1532 aa13.26□□□□□ -0.29
GALNT1-204ENST00000590654 A2MP01023 1474 aa13.25□□□□□ -0.29
GALNT1-204ENST00000590654 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
GALNT1-204ENST00000590654 INO80Q9ULG1 1556 aaPredicted RBP13.25□□□□□ -0.29
GALNT1-204ENST00000590654 KIDINS220Q9ULH0 1771 aa13.24□□□□□ -0.29
GALNT1-204ENST00000590654 NCOA1Q15788 1441 aa13.23□□□□□ -0.29
GALNT1-204ENST00000590654 ADGBQ8N7X0 1667 aa13.23□□□□□ -0.29
GALNT1-204ENST00000590654 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
GALNT1-204ENST00000590654 KIF15Q9NS87 1388 aa13.22□□□□□ -0.29
GALNT1-204ENST00000590654 DUOX2Q9NRD8 1548 aa13.22□□□□□ -0.29
GALNT1-204ENST00000590654 RRP7BPQ9NSQ0 103 aa13.22□□□□□ -0.29
GALNT1-204ENST00000590654 ADGRL2O95490 1459 aa13.21□□□□□ -0.29
GALNT1-204ENST00000590654 CHIC2Q9UKJ5 165 aa13.21□□□□□ -0.29
GALNT1-204ENST00000590654 PLXNC1O60486 1568 aa13.21□□□□□ -0.3
GALNT1-204ENST00000590654 KIF3BO15066 747 aa13.2□□□□□ -0.3
GALNT1-204ENST00000590654 ERBINQ96RT1 1412 aa13.2□□□□□ -0.3
GALNT1-204ENST00000590654 CNTLNQ9NXG0 1405 aa13.2□□□□□ -0.3
GALNT1-204ENST00000590654 ABCA6Q8N139 1617 aa13.19□□□□□ -0.3
GALNT1-204ENST00000590654 ITGAEP38570 1179 aa13.18□□□□□ -0.3
GALNT1-204ENST00000590654 FAM135AQ9P2D6 1515 aa13.18□□□□□ -0.3
GALNT1-204ENST00000590654 KANK1Q14678 1352 aa13.17□□□□□ -0.3
GALNT1-204ENST00000590654 GGT6Q6P531 493 aa13.17□□□□□ -0.3
GALNT1-204ENST00000590654 AEBP2Q6ZN18 517 aaPredicted RBP13.17□□□□□ -0.3
GALNT1-204ENST00000590654 CROCC2H7BZ55 1655 aa13.17□□□□□ -0.3
GALNT1-204ENST00000590654 MLECQ14165 292 aa13.16□□□□□ -0.3
GALNT1-204ENST00000590654 ANKRD50Q9ULJ7 1429 aa13.16□□□□□ -0.3
GALNT1-204ENST00000590654 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
GALNT1-204ENST00000590654 KDM4FA0A1W2PPD8 638 aa13.15□□□□□ -0.3
GALNT1-204ENST00000590654 EIF2AK4Q9P2K8 1649 aaKnown RBP13.14□□□□□ -0.31
GALNT1-204ENST00000590654 BCORL1Q5H9F3 1711 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms