RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 TCOF1Q13428 1488 aaKnown RBP27.23■■□□□ 1.95
CTDP1-205ENST00000590599 COL17A1Q9UMD9 1497 aaPredicted RBP27.2■■□□□ 1.95
CTDP1-205ENST00000590599 GPATCH8Q9UKJ3 1502 aaKnown RBP27.2■■□□□ 1.94
CTDP1-205ENST00000590599 CDC42BPAQ5VT25 1732 aa27.19■■□□□ 1.94
CTDP1-205ENST00000590599 CD109Q6YHK3 1445 aa27.18■■□□□ 1.94
CTDP1-205ENST00000590599 CFDP1Q9UEE9 299 aaPredicted RBP27.14■■□□□ 1.93
CTDP1-205ENST00000590599 TTC37Q6PGP7 1564 aa27.12■■□□□ 1.93
CTDP1-205ENST00000590599 ABCA9Q8IUA7 1624 aa27.12■■□□□ 1.93
CTDP1-205ENST00000590599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.93
CTDP1-205ENST00000590599 TEX14Q8IWB6 1497 aa27.11■■□□□ 1.93
CTDP1-205ENST00000590599 PREX2Q70Z35 1606 aa27.1■■□□□ 1.93
CTDP1-205ENST00000590599 CAMSAP2Q08AD1 1489 aa27.09■■□□□ 1.93
CTDP1-205ENST00000590599 MYO5CQ9NQX4 1742 aa27.07■■□□□ 1.92
CTDP1-205ENST00000590599 HRCP23327 699 aa27.07■■□□□ 1.92
CTDP1-205ENST00000590599 CDC42BPBQ9Y5S2 1711 aa27.05■■□□□ 1.92
CTDP1-205ENST00000590599 DNMT1P26358 1616 aaKnown RBP27.04■■□□□ 1.92
CTDP1-205ENST00000590599 ZNF644Q9H582 1327 aaPredicted RBP27.04■■□□□ 1.92
CTDP1-205ENST00000590599 PTPRKQ15262 1439 aa27.03■■□□□ 1.92
CTDP1-205ENST00000590599 CCER1Q8TC90 406 aaPredicted RBP27.03■■□□□ 1.92
CTDP1-205ENST00000590599 ZNF777Q9ULD5 760 aaPredicted RBP27.03■■□□□ 1.92
CTDP1-205ENST00000590599 SETD5Q9C0A6 1442 aa27■■□□□ 1.91
CTDP1-205ENST00000590599 ARHGAP5Q13017 1502 aa26.99■■□□□ 1.91
CTDP1-205ENST00000590599 DAPK1P53355 1430 aa26.99■■□□□ 1.91
CTDP1-205ENST00000590599 RAB3GAP2Q9H2M9 1393 aa26.96■■□□□ 1.91
CTDP1-205ENST00000590599 ABCC5O15440 1437 aa26.95■■□□□ 1.91
CTDP1-205ENST00000590599 SAMD9LQ8IVG5 1584 aa26.95■■□□□ 1.91
CTDP1-205ENST00000590599 HFM1A2PYH4 1435 aa26.94■■□□□ 1.9
CTDP1-205ENST00000590599 PLCH2O75038 1416 aa26.94■■□□□ 1.9
CTDP1-205ENST00000590599 CROCC2H7BZ55 1655 aa26.93■■□□□ 1.9
CTDP1-205ENST00000590599 AKNAQ7Z591 1439 aa26.91■■□□□ 1.9
CTDP1-205ENST00000590599 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
CTDP1-205ENST00000590599 CHIC2Q9UKJ5 165 aa26.9■■□□□ 1.9
CTDP1-205ENST00000590599 GCC2Q8IWJ2 1684 aa26.9■■□□□ 1.9
CTDP1-205ENST00000590599 ZEB1P37275 1124 aaPredicted RBP26.89■■□□□ 1.9
CTDP1-205ENST00000590599 ARHGEF5Q12774 1597 aa26.89■■□□□ 1.89
CTDP1-205ENST00000590599 ADGBQ8N7X0 1667 aa26.87■■□□□ 1.89
CTDP1-205ENST00000590599 PLEKHH2Q8IVE3 1493 aa26.87■■□□□ 1.89
CTDP1-205ENST00000590599 RAPGEF3O95398 923 aa26.87■■□□□ 1.89
CTDP1-205ENST00000590599 NAIPQ13075 1403 aa26.87■■□□□ 1.89
CTDP1-205ENST00000590599 ROCK1Q13464 1354 aa26.86■■□□□ 1.89
CTDP1-205ENST00000590599 AEBP2Q6ZN18 517 aaPredicted RBP26.85■■□□□ 1.89
CTDP1-205ENST00000590599 KDM4FA0A1W2PPD8 638 aa26.84■■□□□ 1.89
CTDP1-205ENST00000590599 EFCAB2Q5VUJ9 269 aa26.84■■□□□ 1.89
CTDP1-205ENST00000590599 SHANK2Q9UPX8 1470 aa26.84■■□□□ 1.89
CTDP1-205ENST00000590599 SYCP2Q9BX26 1530 aa26.84■■□□□ 1.89
CTDP1-205ENST00000590599 FRMPD1Q5SYB0 1578 aa26.83■■□□□ 1.89
CTDP1-205ENST00000590599 NEO1Q92859 1461 aa26.83■■□□□ 1.89
CTDP1-205ENST00000590599 MBD5Q9P267 1494 aa26.83■■□□□ 1.89
CTDP1-205ENST00000590599 RRP7BPQ9NSQ0 103 aa26.83■■□□□ 1.89
CTDP1-205ENST00000590599 FANCAO15360 1455 aa26.82■■□□□ 1.88
CTDP1-205ENST00000590599 CCDC141Q6ZP82 1450 aa26.82■■□□□ 1.88
CTDP1-205ENST00000590599 KIAA1107Q9UPP5 1409 aa26.81■■□□□ 1.88
CTDP1-205ENST00000590599 DHX57Q6P158 1386 aaKnown RBP26.81■■□□□ 1.88
CTDP1-205ENST00000590599 HNRNPMP52272 730 aaKnown RBP eCLIP26.81■■□□□ 1.88
CTDP1-205ENST00000590599 ADGRL2O95490 1459 aa26.79■■□□□ 1.88
CTDP1-205ENST00000590599 ABCC1P33527 1531 aa26.79■■□□□ 1.88
CTDP1-205ENST00000590599 RSPH4AQ5TD94 716 aa26.79■■□□□ 1.88
CTDP1-205ENST00000590599 C9orf84Q5VXU9 1444 aa26.78■■□□□ 1.88
CTDP1-205ENST00000590599 RICTORQ6R327 1708 aa26.76■■□□□ 1.88
CTDP1-205ENST00000590599 TSPY4P0CV99 314 aa26.76■■□□□ 1.87
CTDP1-205ENST00000590599 TSPY10P0CW01 314 aa26.76■■□□□ 1.87
CTDP1-205ENST00000590599 ANKRD30AQ9BXX3 1397 aa26.75■■□□□ 1.87
CTDP1-205ENST00000590599 CFAP74Q9C0B2 1584 aa26.74■■□□□ 1.87
CTDP1-205ENST00000590599 NCOA1Q15788 1441 aa26.74■■□□□ 1.87
CTDP1-205ENST00000590599 ADGRL1O94910 1474 aa26.72■■□□□ 1.87
CTDP1-205ENST00000590599 ARHGEF12Q9NZN5 1544 aa26.72■■□□□ 1.87
CTDP1-205ENST00000590599 MAST1Q9Y2H9 1570 aa26.71■■□□□ 1.87
CTDP1-205ENST00000590599 CLSPNQ9HAW4 1339 aa26.69■■□□□ 1.86
CTDP1-205ENST00000590599 DENND4BO75064 1496 aaPredicted RBP26.69■■□□□ 1.86
CTDP1-205ENST00000590599 SCAPERQ9BY12 1400 aa26.65■■□□□ 1.86
CTDP1-205ENST00000590599 TRAPPC8Q9Y2L5 1435 aa26.63■■□□□ 1.85
CTDP1-205ENST00000590599 ACIN1Q9UKV3 1341 aaKnown RBP26.63■■□□□ 1.85
CTDP1-205ENST00000590599 PLXNC1O60486 1568 aa26.61■■□□□ 1.85
CTDP1-205ENST00000590599 KIF15Q9NS87 1388 aa26.61■■□□□ 1.85
CTDP1-205ENST00000590599 SIGLEC1Q9BZZ2 1709 aa26.6■■□□□ 1.85
CTDP1-205ENST00000590599 ANKRD50Q9ULJ7 1429 aa26.59■■□□□ 1.85
CTDP1-205ENST00000590599 YEATS2Q9ULM3 1422 aa26.58■■□□□ 1.85
CTDP1-205ENST00000590599 POGZQ7Z3K3 1410 aa26.58■■□□□ 1.84
CTDP1-205ENST00000590599 TRIM52Q96A61 297 aa26.57■■□□□ 1.84
CTDP1-205ENST00000590599 ARHGEF40Q8TER5 1519 aa26.56■■□□□ 1.84
CTDP1-205ENST00000590599 ZMYM4Q5VZL5 1548 aa26.55■■□□□ 1.84
CTDP1-205ENST00000590599 ZFYVE16Q7Z3T8 1539 aa26.54■■□□□ 1.84
CTDP1-205ENST00000590599 SPAG9O60271 1321 aaKnown RBP26.54■■□□□ 1.84
CTDP1-205ENST00000590599 AFAP1Q8N556 730 aa26.53■■□□□ 1.84
CTDP1-205ENST00000590599 RTEL1-TNFRSF6BF6WH68 1400 aa26.52■■□□□ 1.84
CTDP1-205ENST00000590599 INO80Q9ULG1 1556 aaPredicted RBP26.51■■□□□ 1.83
CTDP1-205ENST00000590599 ZNF518AQ6AHZ1 1483 aa26.51■■□□□ 1.83
CTDP1-205ENST00000590599 DUOX2Q9NRD8 1548 aa26.5■■□□□ 1.83
CTDP1-205ENST00000590599 ATP7AQ04656 1500 aa26.49■■□□□ 1.83
CTDP1-205ENST00000590599 ARID4BQ4LE39 1312 aaPredicted RBP26.47■■□□□ 1.83
CTDP1-205ENST00000590599 BCORL1Q5H9F3 1711 aa26.46■■□□□ 1.83
CTDP1-205ENST00000590599 ADAMTSL3P82987 1691 aa26.45■■□□□ 1.82
CTDP1-205ENST00000590599 KDM5CP41229 1560 aa26.45■■□□□ 1.82
CTDP1-205ENST00000590599 ERBINQ96RT1 1412 aa26.43■■□□□ 1.82
CTDP1-205ENST00000590599 MPHOSPH9Q99550 1183 aa26.43■■□□□ 1.82
CTDP1-205ENST00000590599 MYT1LQ9UL68 1186 aa26.41■■□□□ 1.82
CTDP1-205ENST00000590599 MADDQ8WXG6 1647 aa26.41■■□□□ 1.82
CTDP1-205ENST00000590599 MAGI2Q86UL8 1455 aa26.41■■□□□ 1.82
CTDP1-205ENST00000590599 PZPP20742 1482 aa26.4■■□□□ 1.82
CTDP1-205ENST00000590599 HECW2Q9P2P5 1572 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms