RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 CDC42BPBQ9Y5S2 1711 aa25.51■■□□□ 1.67
GCDH-212ENST00000590530 PREX2Q70Z35 1606 aa25.5■■□□□ 1.67
GCDH-212ENST00000590530 MAPKBP1O60336 1514 aa25.49■■□□□ 1.67
GCDH-212ENST00000590530 PLCH2O75038 1416 aa25.49■■□□□ 1.67
GCDH-212ENST00000590530 CHIC2Q9UKJ5 165 aa25.47■■□□□ 1.67
GCDH-212ENST00000590530 ARHGAP5Q13017 1502 aa25.47■■□□□ 1.67
GCDH-212ENST00000590530 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
GCDH-212ENST00000590530 ABCA9Q8IUA7 1624 aa25.46■■□□□ 1.67
GCDH-212ENST00000590530 ABCC5O15440 1437 aa25.45■■□□□ 1.66
GCDH-212ENST00000590530 MYO5CQ9NQX4 1742 aa25.45■■□□□ 1.66
GCDH-212ENST00000590530 HNRNPMP52272 730 aaKnown RBP eCLIP25.45■■□□□ 1.66
GCDH-212ENST00000590530 SAMD9LQ8IVG5 1584 aa25.44■■□□□ 1.66
GCDH-212ENST00000590530 ZEB1P37275 1124 aaPredicted RBP25.44■■□□□ 1.66
GCDH-212ENST00000590530 DAPK1P53355 1430 aa25.43■■□□□ 1.66
GCDH-212ENST00000590530 EFCAB2Q5VUJ9 269 aa25.39■■□□□ 1.66
GCDH-212ENST00000590530 MBD5Q9P267 1494 aa25.38■■□□□ 1.65
GCDH-212ENST00000590530 DNMT1P26358 1616 aaKnown RBP25.38■■□□□ 1.65
GCDH-212ENST00000590530 RRP7BPQ9NSQ0 103 aa25.37■■□□□ 1.65
GCDH-212ENST00000590530 ARHGEF12Q9NZN5 1544 aa25.37■■□□□ 1.65
GCDH-212ENST00000590530 CD109Q6YHK3 1445 aa25.37■■□□□ 1.65
GCDH-212ENST00000590530 SYCP2Q9BX26 1530 aa25.34■■□□□ 1.65
GCDH-212ENST00000590530 FAM69CQ0P6D2 419 aa25.34■■□□□ 1.65
GCDH-212ENST00000590530 FANCAO15360 1455 aa25.33■■□□□ 1.65
GCDH-212ENST00000590530 CCER1Q8TC90 406 aaPredicted RBP25.33■■□□□ 1.65
GCDH-212ENST00000590530 RAB3GAP2Q9H2M9 1393 aa25.32■■□□□ 1.64
GCDH-212ENST00000590530 SETD5Q9C0A6 1442 aa25.32■■□□□ 1.64
GCDH-212ENST00000590530 ARAP3Q8WWN8 1544 aa25.32■■□□□ 1.64
GCDH-212ENST00000590530 DIP2BQ9P265 1576 aa25.3■■□□□ 1.64
GCDH-212ENST00000590530 AKNAQ7Z591 1439 aa25.3■■□□□ 1.64
GCDH-212ENST00000590530 NAIPQ13075 1403 aa25.29■■□□□ 1.64
GCDH-212ENST00000590530 HFM1A2PYH4 1435 aa25.28■■□□□ 1.64
GCDH-212ENST00000590530 KIAA1107Q9UPP5 1409 aa25.28■■□□□ 1.64
GCDH-212ENST00000590530 ABCC1P33527 1531 aa25.28■■□□□ 1.64
GCDH-212ENST00000590530 TRAPPC8Q9Y2L5 1435 aa25.27■■□□□ 1.64
GCDH-212ENST00000590530 GLI2P10070 1586 aa25.27■■□□□ 1.64
GCDH-212ENST00000590530 ARHGEF5Q12774 1597 aa25.26■■□□□ 1.63
GCDH-212ENST00000590530 CCDC141Q6ZP82 1450 aa25.25■■□□□ 1.63
GCDH-212ENST00000590530 PLEKHH2Q8IVE3 1493 aa25.25■■□□□ 1.63
GCDH-212ENST00000590530 CROCC2H7BZ55 1655 aa25.24■■□□□ 1.63
GCDH-212ENST00000590530 C9orf84Q5VXU9 1444 aa25.24■■□□□ 1.63
GCDH-212ENST00000590530 MAP3K4Q9Y6R4 1608 aa25.24■■□□□ 1.63
GCDH-212ENST00000590530 AFAP1Q8N556 730 aa25.24■■□□□ 1.63
GCDH-212ENST00000590530 ROCK1Q13464 1354 aa25.22■■□□□ 1.63
GCDH-212ENST00000590530 TSPY4P0CV99 314 aa25.22■■□□□ 1.63
GCDH-212ENST00000590530 TSPY10P0CW01 314 aa25.22■■□□□ 1.63
GCDH-212ENST00000590530 NCOA1Q15788 1441 aa25.22■■□□□ 1.63
GCDH-212ENST00000590530 ADGRL1O94910 1474 aa25.22■■□□□ 1.63
GCDH-212ENST00000590530 SCAPERQ9BY12 1400 aa25.21■■□□□ 1.63
GCDH-212ENST00000590530 KDM6BO15054 1643 aa25.21■■□□□ 1.63
GCDH-212ENST00000590530 RSPH4AQ5TD94 716 aa25.19■■□□□ 1.62
GCDH-212ENST00000590530 SHANK2Q9UPX8 1470 aa25.19■■□□□ 1.62
GCDH-212ENST00000590530 ADGRL2O95490 1459 aa25.18■■□□□ 1.62
GCDH-212ENST00000590530 ANKRD30AQ9BXX3 1397 aa25.16■■□□□ 1.62
GCDH-212ENST00000590530 DHX57Q6P158 1386 aaKnown RBP25.15■■□□□ 1.62
GCDH-212ENST00000590530 KIF13AQ9H1H9 1805 aa25.14■■□□□ 1.62
GCDH-212ENST00000590530 GCC2Q8IWJ2 1684 aa25.13■■□□□ 1.61
GCDH-212ENST00000590530 ADGBQ8N7X0 1667 aa25.13■■□□□ 1.61
GCDH-212ENST00000590530 TSPOAP1O95153 1857 aa25.12■■□□□ 1.61
GCDH-212ENST00000590530 PPRC1Q5VV67 1664 aaKnown RBP25.11■■□□□ 1.61
GCDH-212ENST00000590530 NEO1Q92859 1461 aa25.11■■□□□ 1.61
GCDH-212ENST00000590530 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
GCDH-212ENST00000590530 RAPGEF3O95398 923 aa25.1■■□□□ 1.61
GCDH-212ENST00000590530 SPAG9O60271 1321 aaKnown RBP25.09■■□□□ 1.61
GCDH-212ENST00000590530 MAST1Q9Y2H9 1570 aa25.09■■□□□ 1.61
GCDH-212ENST00000590530 CLSPNQ9HAW4 1339 aa25.09■■□□□ 1.61
GCDH-212ENST00000590530 CFAP74Q9C0B2 1584 aa25.08■■□□□ 1.61
GCDH-212ENST00000590530 POGZQ7Z3K3 1410 aa25.05■■□□□ 1.6
GCDH-212ENST00000590530 ANKRD50Q9ULJ7 1429 aa25.05■■□□□ 1.6
GCDH-212ENST00000590530 ZFYVE16Q7Z3T8 1539 aa25.04■■□□□ 1.6
GCDH-212ENST00000590530 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
GCDH-212ENST00000590530 MYT1LQ9UL68 1186 aa25.02■■□□□ 1.6
GCDH-212ENST00000590530 DENND4BO75064 1496 aaPredicted RBP25.02■■□□□ 1.6
GCDH-212ENST00000590530 ZNF518AQ6AHZ1 1483 aa25.02■■□□□ 1.6
GCDH-212ENST00000590530 TRHP20396 242 aaPredicted RBP25.01■■□□□ 1.59
GCDH-212ENST00000590530 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
GCDH-212ENST00000590530 PLXNC1O60486 1568 aa24.99■■□□□ 1.59
GCDH-212ENST00000590530 ATP7AQ04656 1500 aa24.99■■□□□ 1.59
GCDH-212ENST00000590530 INO80Q9ULG1 1556 aaPredicted RBP24.99■■□□□ 1.59
GCDH-212ENST00000590530 TEX14Q8IWB6 1497 aa24.98■■□□□ 1.59
GCDH-212ENST00000590530 KDM5CP41229 1560 aa24.97■■□□□ 1.59
GCDH-212ENST00000590530 COL17A1Q9UMD9 1497 aaPredicted RBP24.96■■□□□ 1.59
GCDH-212ENST00000590530 KIDINS220Q9ULH0 1771 aa24.95■■□□□ 1.58
GCDH-212ENST00000590530 FRMPD1Q5SYB0 1578 aa24.94■■□□□ 1.58
GCDH-212ENST00000590530 RICTORQ6R327 1708 aa24.93■■□□□ 1.58
GCDH-212ENST00000590530 DUOX2Q9NRD8 1548 aa24.92■■□□□ 1.58
GCDH-212ENST00000590530 MLH3Q9UHC1 1453 aa24.91■■□□□ 1.58
GCDH-212ENST00000590530 MPHOSPH9Q99550 1183 aa24.91■■□□□ 1.58
GCDH-212ENST00000590530 FOXD1Q16676 465 aa24.89■■□□□ 1.58
GCDH-212ENST00000590530 HECW2Q9P2P5 1572 aa24.88■■□□□ 1.57
GCDH-212ENST00000590530 YEATS2Q9ULM3 1422 aa24.88■■□□□ 1.57
GCDH-212ENST00000590530 PZPP20742 1482 aa24.88■■□□□ 1.57
GCDH-212ENST00000590530 NUP155O75694 1391 aa24.86■■□□□ 1.57
GCDH-212ENST00000590530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.86■■□□□ 1.57
GCDH-212ENST00000590530 ERBINQ96RT1 1412 aa24.86■■□□□ 1.57
GCDH-212ENST00000590530 DHX29Q7Z478 1369 aaKnown RBP24.85■■□□□ 1.57
GCDH-212ENST00000590530 SIN3AQ96ST3 1273 aa24.85■■□□□ 1.57
GCDH-212ENST00000590530 SLC4A1APQ9BWU0 796 aaKnown RBP24.85■■□□□ 1.57
GCDH-212ENST00000590530 ABCA6Q8N139 1617 aa24.84■■□□□ 1.57
GCDH-212ENST00000590530 ACIN1Q9UKV3 1341 aaKnown RBP24.83■■□□□ 1.57
GCDH-212ENST00000590530 A2MP01023 1474 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms