RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 SCAPERQ9BY12 1400 aa25.2■■□□□ 1.63
GHDC-211ENST00000590520 KIF14Q15058 1648 aa25.18■■□□□ 1.62
GHDC-211ENST00000590520 C9orf84Q5VXU9 1444 aa25.16■■□□□ 1.62
GHDC-211ENST00000590520 ARHGEF12Q9NZN5 1544 aa25.16■■□□□ 1.62
GHDC-211ENST00000590520 ATP10AO60312 1499 aa25.14■■□□□ 1.61
GHDC-211ENST00000590520 HSPA2P54652 639 aa25.13■■□□□ 1.61
GHDC-211ENST00000590520 PLPPR3Q6T4P5 718 aa25.13■■□□□ 1.61
GHDC-211ENST00000590520 ARHGAP35Q9NRY4 1499 aa25.13■■□□□ 1.61
GHDC-211ENST00000590520 PREX1Q8TCU6 1659 aa25.12■■□□□ 1.61
GHDC-211ENST00000590520 ZNF518AQ6AHZ1 1483 aa25.11■■□□□ 1.61
GHDC-211ENST00000590520 MLECQ14165 292 aa25.1■■□□□ 1.61
GHDC-211ENST00000590520 KDM5CP41229 1560 aa25.1■■□□□ 1.61
GHDC-211ENST00000590520 ARHGAP5Q13017 1502 aa25.08■■□□□ 1.61
GHDC-211ENST00000590520 EFCAB2Q5VUJ9 269 aa25.08■■□□□ 1.61
GHDC-211ENST00000590520 CDK11AQ9UQ88 783 aaPredicted RBP25.08■■□□□ 1.61
GHDC-211ENST00000590520 TROQ12816 1431 aaPredicted RBP25.08■■□□□ 1.61
GHDC-211ENST00000590520 LRRIQ1Q96JM4 1722 aa25.07■■□□□ 1.6
GHDC-211ENST00000590520 CLIP1P30622 1438 aa25.07■■□□□ 1.6
GHDC-211ENST00000590520 UBTFP17480 764 aaKnown RBP25.06■■□□□ 1.6
GHDC-211ENST00000590520 ATP1B4Q9UN42 357 aaPredicted RBP25.06■■□□□ 1.6
GHDC-211ENST00000590520 DIP2CQ9Y2E4 1556 aa25.03■■□□□ 1.6
GHDC-211ENST00000590520 REREQ9P2R6 1566 aa25.02■■□□□ 1.6
GHDC-211ENST00000590520 CDC42BPBQ9Y5S2 1711 aa25■■□□□ 1.59
GHDC-211ENST00000590520 EHMT2Q96KQ7 1210 aa25■■□□□ 1.59
GHDC-211ENST00000590520 PREX2Q70Z35 1606 aa25■■□□□ 1.59
GHDC-211ENST00000590520 ABCA6Q8N139 1617 aa24.99■■□□□ 1.59
GHDC-211ENST00000590520 ABCC1P33527 1531 aa24.96■■□□□ 1.59
GHDC-211ENST00000590520 ITSN2Q9NZM3 1697 aa24.95■■□□□ 1.58
GHDC-211ENST00000590520 SETD1BQ9UPS6 1966 aaKnown RBP24.95■■□□□ 1.58
GHDC-211ENST00000590520 CERKQ8TCT0 537 aa24.95■■□□□ 1.58
GHDC-211ENST00000590520 CCDC18Q5T9S5 1454 aa24.95■■□□□ 1.58
GHDC-211ENST00000590520 MLH3Q9UHC1 1453 aa24.94■■□□□ 1.58
GHDC-211ENST00000590520 UHRF1BP1Q6BDS2 1440 aa24.94■■□□□ 1.58
GHDC-211ENST00000590520 STRCQ7RTU9 1775 aa24.93■■□□□ 1.58
GHDC-211ENST00000590520 AFAP1Q8N556 730 aa24.92■■□□□ 1.58
GHDC-211ENST00000590520 C3P01024 1663 aa24.91■■□□□ 1.58
GHDC-211ENST00000590520 AGLP35573 1532 aa24.91■■□□□ 1.58
GHDC-211ENST00000590520 CEBPAP49715 358 aaPredicted RBP24.9■■□□□ 1.58
GHDC-211ENST00000590520 MYT1LQ9UL68 1186 aa24.89■■□□□ 1.58
GHDC-211ENST00000590520 CASKIN1Q8WXD9 1431 aa24.88■■□□□ 1.57
GHDC-211ENST00000590520 CDC42BPAQ5VT25 1732 aa24.88■■□□□ 1.57
GHDC-211ENST00000590520 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
GHDC-211ENST00000590520 KIDINS220Q9ULH0 1771 aa24.85■■□□□ 1.57
GHDC-211ENST00000590520 DMRT2Q9Y5R5 561 aa24.83■■□□□ 1.57
GHDC-211ENST00000590520 FYCO1Q9BQS8 1478 aa24.82■■□□□ 1.56
GHDC-211ENST00000590520 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
GHDC-211ENST00000590520 CNTLNQ9NXG0 1405 aa24.79■■□□□ 1.56
GHDC-211ENST00000590520 MROH2AA6NES4 1674 aa24.78■■□□□ 1.56
GHDC-211ENST00000590520 SAMD9LQ8IVG5 1584 aa24.77■■□□□ 1.56
GHDC-211ENST00000590520 ESF1Q9H501 851 aaKnown RBP24.77■■□□□ 1.56
GHDC-211ENST00000590520 PTPRTO14522 1441 aa24.77■■□□□ 1.56
GHDC-211ENST00000590520 SYCP2Q9BX26 1530 aa24.76■■□□□ 1.55
GHDC-211ENST00000590520 NCOA1Q15788 1441 aa24.7■■□□□ 1.55
GHDC-211ENST00000590520 NPATQ14207 1427 aa24.69■■□□□ 1.54
GHDC-211ENST00000590520 SUPT6HQ7KZ85 1726 aaKnown RBP24.69■■□□□ 1.54
GHDC-211ENST00000590520 INO80Q9ULG1 1556 aaPredicted RBP24.68■■□□□ 1.54
GHDC-211ENST00000590520 ATP7AQ04656 1500 aa24.68■■□□□ 1.54
GHDC-211ENST00000590520 GPATCH8Q9UKJ3 1502 aaKnown RBP24.68■■□□□ 1.54
GHDC-211ENST00000590520 PLXNC1O60486 1568 aa24.67■■□□□ 1.54
GHDC-211ENST00000590520 LTBP4Q8N2S1 1624 aa24.67■■□□□ 1.54
GHDC-211ENST00000590520 IQSEC2Q5JU85 1478 aa24.65■■□□□ 1.54
GHDC-211ENST00000590520 PLEKHH2Q8IVE3 1493 aa24.65■■□□□ 1.54
GHDC-211ENST00000590520 CAMSAP1Q5T5Y3 1602 aa24.64■■□□□ 1.54
GHDC-211ENST00000590520 ZNF777Q9ULD5 760 aaPredicted RBP24.64■■□□□ 1.54
GHDC-211ENST00000590520 ZNF142P52746 1687 aaPredicted RBP24.64■■□□□ 1.53
GHDC-211ENST00000590520 CLTCQ00610 1675 aaKnown RBP24.64■■□□□ 1.53
GHDC-211ENST00000590520 SPAG9O60271 1321 aaKnown RBP24.63■■□□□ 1.53
GHDC-211ENST00000590520 KIAA1107Q9UPP5 1409 aa24.63■■□□□ 1.53
GHDC-211ENST00000590520 MYO3AQ8NEV4 1616 aa24.63■■□□□ 1.53
GHDC-211ENST00000590520 DISP3Q9P2K9 1392 aa24.6■■□□□ 1.53
GHDC-211ENST00000590520 SPATA31D1Q6ZQQ2 1576 aa24.59■■□□□ 1.53
GHDC-211ENST00000590520 A2MP01023 1474 aa24.59■■□□□ 1.53
GHDC-211ENST00000590520 ADGBQ8N7X0 1667 aa24.59■■□□□ 1.53
GHDC-211ENST00000590520 ZMYM3Q14202 1370 aa24.58■■□□□ 1.53
GHDC-211ENST00000590520 CCNB3Q8WWL7 1395 aa24.57■■□□□ 1.52
GHDC-211ENST00000590520 HNRNPMP52272 730 aaKnown RBP eCLIP24.56■■□□□ 1.52
GHDC-211ENST00000590520 CEP170BQ9Y4F5 1589 aaPredicted RBP24.55■■□□□ 1.52
GHDC-211ENST00000590520 PLA2R1Q13018 1463 aa24.55■■□□□ 1.52
GHDC-211ENST00000590520 CFDP1Q9UEE9 299 aaPredicted RBP24.54■■□□□ 1.52
GHDC-211ENST00000590520 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
GHDC-211ENST00000590520 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
GHDC-211ENST00000590520 EHBP1L1Q8N3D4 1523 aa24.52■■□□□ 1.52
GHDC-211ENST00000590520 PTPRKQ15262 1439 aa24.51■■□□□ 1.51
GHDC-211ENST00000590520 TCOF1Q13428 1488 aaKnown RBP24.49■■□□□ 1.51
GHDC-211ENST00000590520 ILDR2Q71H61 639 aa24.46■■□□□ 1.51
GHDC-211ENST00000590520 NCKAP5LQ9HCH0 1330 aa24.45■■□□□ 1.5
GHDC-211ENST00000590520 PKD2Q13563 968 aa24.44■■□□□ 1.5
GHDC-211ENST00000590520 GGT6Q6P531 493 aa24.44■■□□□ 1.5
GHDC-211ENST00000590520 MBD5Q9P267 1494 aa24.44■■□□□ 1.5
GHDC-211ENST00000590520 PPP6R1Q9UPN7 881 aa24.43■■□□□ 1.5
GHDC-211ENST00000590520 RTEL1-TNFRSF6BF6WH68 1400 aa24.43■■□□□ 1.5
GHDC-211ENST00000590520 ZNF335Q9H4Z2 1342 aaPredicted RBP24.42■■□□□ 1.5
GHDC-211ENST00000590520 CEP162Q5TB80 1403 aa24.42■■□□□ 1.5
GHDC-211ENST00000590520 A2ML1A8K2U0 1454 aa24.41■■□□□ 1.5
GHDC-211ENST00000590520 SOCS7O14512 581 aa24.41■■□□□ 1.5
GHDC-211ENST00000590520 FAM135AQ9P2D6 1515 aa24.4■■□□□ 1.5
GHDC-211ENST00000590520 POLR1AO95602 1720 aaPredicted RBP24.4■■□□□ 1.5
GHDC-211ENST00000590520 DNMT1P26358 1616 aaKnown RBP24.39■■□□□ 1.5
GHDC-211ENST00000590520 ZNF644Q9H582 1327 aaPredicted RBP24.37■■□□□ 1.49
GHDC-211ENST00000590520 CCDC141Q6ZP82 1450 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms