RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 KIF13AQ9H1H9 1805 aa14.3□□□□□ -0.12
ZNF397-208ENST00000590470 ARHGAP5Q13017 1502 aa14.3□□□□□ -0.12
ZNF397-208ENST00000590470 DIP2BQ9P265 1576 aa14.3□□□□□ -0.12
ZNF397-208ENST00000590470 CFDP1Q9UEE9 299 aaPredicted RBP14.29□□□□□ -0.12
ZNF397-208ENST00000590470 CAMSAP2Q08AD1 1489 aa14.28□□□□□ -0.12
ZNF397-208ENST00000590470 SAMD9LQ8IVG5 1584 aa14.28□□□□□ -0.12
ZNF397-208ENST00000590470 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.13
ZNF397-208ENST00000590470 MAP3K4Q9Y6R4 1608 aa14.26□□□□□ -0.13
ZNF397-208ENST00000590470 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
ZNF397-208ENST00000590470 PLCH2O75038 1416 aa14.25□□□□□ -0.13
ZNF397-208ENST00000590470 MIA2Q96PC5 1412 aa14.24□□□□□ -0.13
ZNF397-208ENST00000590470 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
ZNF397-208ENST00000590470 HNRNPMP52272 730 aaKnown RBP eCLIP14.23□□□□□ -0.13
ZNF397-208ENST00000590470 GLI2P10070 1586 aa14.22□□□□□ -0.13
ZNF397-208ENST00000590470 PPRC1Q5VV67 1664 aaKnown RBP14.22□□□□□ -0.13
ZNF397-208ENST00000590470 PTPRKQ15262 1439 aa14.22□□□□□ -0.13
ZNF397-208ENST00000590470 SYCP2Q9BX26 1530 aa14.21□□□□□ -0.13
ZNF397-208ENST00000590470 CHIC2Q9UKJ5 165 aa14.21□□□□□ -0.13
ZNF397-208ENST00000590470 FANCAO15360 1455 aa14.2□□□□□ -0.14
ZNF397-208ENST00000590470 DNMT1P26358 1616 aaKnown RBP14.2□□□□□ -0.14
ZNF397-208ENST00000590470 ARHGEF12Q9NZN5 1544 aa14.2□□□□□ -0.14
ZNF397-208ENST00000590470 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
ZNF397-208ENST00000590470 EFCAB2Q5VUJ9 269 aa14.19□□□□□ -0.14
ZNF397-208ENST00000590470 CROCC2H7BZ55 1655 aa14.19□□□□□ -0.14
ZNF397-208ENST00000590470 ABCC1P33527 1531 aa14.18□□□□□ -0.14
ZNF397-208ENST00000590470 ABCC5O15440 1437 aa14.17□□□□□ -0.14
ZNF397-208ENST00000590470 DAPK1P53355 1430 aa14.17□□□□□ -0.14
ZNF397-208ENST00000590470 ARAP3Q8WWN8 1544 aa14.16□□□□□ -0.14
ZNF397-208ENST00000590470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.16□□□□□ -0.14
ZNF397-208ENST00000590470 MBD5Q9P267 1494 aa14.15□□□□□ -0.14
ZNF397-208ENST00000590470 AKNAQ7Z591 1439 aa14.15□□□□□ -0.14
ZNF397-208ENST00000590470 TRAPPC8Q9Y2L5 1435 aa14.15□□□□□ -0.14
ZNF397-208ENST00000590470 CFAP74Q9C0B2 1584 aa14.14□□□□□ -0.15
ZNF397-208ENST00000590470 ADGRL1O94910 1474 aa14.14□□□□□ -0.15
ZNF397-208ENST00000590470 RRP7BPQ9NSQ0 103 aa14.14□□□□□ -0.15
ZNF397-208ENST00000590470 ADGBQ8N7X0 1667 aa14.14□□□□□ -0.15
ZNF397-208ENST00000590470 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
ZNF397-208ENST00000590470 SCAPERQ9BY12 1400 aa14.13□□□□□ -0.15
ZNF397-208ENST00000590470 AFAP1Q8N556 730 aa14.12□□□□□ -0.15
ZNF397-208ENST00000590470 KDM6BO15054 1643 aa14.11□□□□□ -0.15
ZNF397-208ENST00000590470 CCDC141Q6ZP82 1450 aa14.11□□□□□ -0.15
ZNF397-208ENST00000590470 PLEKHH2Q8IVE3 1493 aa14.1□□□□□ -0.15
ZNF397-208ENST00000590470 C9orf84Q5VXU9 1444 aa14.09□□□□□ -0.15
ZNF397-208ENST00000590470 KIAA1107Q9UPP5 1409 aa14.08□□□□□ -0.15
ZNF397-208ENST00000590470 NEO1Q92859 1461 aa14.08□□□□□ -0.16
ZNF397-208ENST00000590470 RICTORQ6R327 1708 aa14.08□□□□□ -0.16
ZNF397-208ENST00000590470 RAPGEF3O95398 923 aa14.08□□□□□ -0.16
ZNF397-208ENST00000590470 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
ZNF397-208ENST00000590470 MYT1LQ9UL68 1186 aa14.07□□□□□ -0.16
ZNF397-208ENST00000590470 FRMPD1Q5SYB0 1578 aa14.06□□□□□ -0.16
ZNF397-208ENST00000590470 TSPY4P0CV99 314 aa14.06□□□□□ -0.16
ZNF397-208ENST00000590470 TSPY10P0CW01 314 aa14.06□□□□□ -0.16
ZNF397-208ENST00000590470 TEX14Q8IWB6 1497 aa14.06□□□□□ -0.16
ZNF397-208ENST00000590470 RAB3GAP2Q9H2M9 1393 aa14.05□□□□□ -0.16
ZNF397-208ENST00000590470 NAIPQ13075 1403 aa14.05□□□□□ -0.16
ZNF397-208ENST00000590470 COL17A1Q9UMD9 1497 aaPredicted RBP14.05□□□□□ -0.16
ZNF397-208ENST00000590470 SHANK2Q9UPX8 1470 aa14.05□□□□□ -0.16
ZNF397-208ENST00000590470 MAST1Q9Y2H9 1570 aa14.05□□□□□ -0.16
ZNF397-208ENST00000590470 SPAG9O60271 1321 aaKnown RBP14.04□□□□□ -0.16
ZNF397-208ENST00000590470 POGZQ7Z3K3 1410 aa14.04□□□□□ -0.16
ZNF397-208ENST00000590470 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
ZNF397-208ENST00000590470 DENND4BO75064 1496 aaPredicted RBP14.04□□□□□ -0.16
ZNF397-208ENST00000590470 INO80Q9ULG1 1556 aaPredicted RBP14.04□□□□□ -0.16
ZNF397-208ENST00000590470 KIDINS220Q9ULH0 1771 aa14.04□□□□□ -0.16
ZNF397-208ENST00000590470 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
ZNF397-208ENST00000590470 ZFYVE16Q7Z3T8 1539 aa14.03□□□□□ -0.16
ZNF397-208ENST00000590470 ATP7AQ04656 1500 aa14.02□□□□□ -0.16
ZNF397-208ENST00000590470 ADGRL2O95490 1459 aa14.02□□□□□ -0.16
ZNF397-208ENST00000590470 HFM1A2PYH4 1435 aa14.02□□□□□ -0.16
ZNF397-208ENST00000590470 ZNF518AQ6AHZ1 1483 aa14.01□□□□□ -0.17
ZNF397-208ENST00000590470 ANKRD30AQ9BXX3 1397 aa14.01□□□□□ -0.17
ZNF397-208ENST00000590470 RSPH4AQ5TD94 716 aa14.01□□□□□ -0.17
ZNF397-208ENST00000590470 KDM5CP41229 1560 aa14□□□□□ -0.17
ZNF397-208ENST00000590470 HECW2Q9P2P5 1572 aa14□□□□□ -0.17
ZNF397-208ENST00000590470 ROCK1Q13464 1354 aa14□□□□□ -0.17
ZNF397-208ENST00000590470 KIF15Q9NS87 1388 aa14□□□□□ -0.17
ZNF397-208ENST00000590470 ABCA6Q8N139 1617 aa14□□□□□ -0.17
ZNF397-208ENST00000590470 PLXNC1O60486 1568 aa14□□□□□ -0.17
ZNF397-208ENST00000590470 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
ZNF397-208ENST00000590470 RTEL1-TNFRSF6BF6WH68 1400 aa13.95□□□□□ -0.18
ZNF397-208ENST00000590470 DIP2CQ9Y2E4 1556 aa13.95□□□□□ -0.18
ZNF397-208ENST00000590470 MLH3Q9UHC1 1453 aa13.94□□□□□ -0.18
ZNF397-208ENST00000590470 TRIM52Q96A61 297 aa13.94□□□□□ -0.18
ZNF397-208ENST00000590470 ANKRD50Q9ULJ7 1429 aa13.94□□□□□ -0.18
ZNF397-208ENST00000590470 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
ZNF397-208ENST00000590470 ZMYM4Q5VZL5 1548 aa13.93□□□□□ -0.18
ZNF397-208ENST00000590470 DUOX2Q9NRD8 1548 aa13.93□□□□□ -0.18
ZNF397-208ENST00000590470 CCER1Q8TC90 406 aaPredicted RBP13.92□□□□□ -0.18
ZNF397-208ENST00000590470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.18
ZNF397-208ENST00000590470 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
ZNF397-208ENST00000590470 A2MP01023 1474 aa13.9□□□□□ -0.18
ZNF397-208ENST00000590470 DHX29Q7Z478 1369 aaKnown RBP13.88□□□□□ -0.19
ZNF397-208ENST00000590470 KIF3BO15066 747 aa13.87□□□□□ -0.19
ZNF397-208ENST00000590470 FOXD1Q16676 465 aa13.87□□□□□ -0.19
ZNF397-208ENST00000590470 ERBINQ96RT1 1412 aa13.87□□□□□ -0.19
ZNF397-208ENST00000590470 UNC13BO14795 1591 aa13.87□□□□□ -0.19
ZNF397-208ENST00000590470 ARHGEF40Q8TER5 1519 aa13.86□□□□□ -0.19
ZNF397-208ENST00000590470 PZPP20742 1482 aa13.86□□□□□ -0.19
ZNF397-208ENST00000590470 EIF2AK4Q9P2K8 1649 aaKnown RBP13.85□□□□□ -0.19
ZNF397-208ENST00000590470 ATP10AO60312 1499 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms