RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 SCAPERQ9BY12 1400 aa29.21■■■□□ 2.27
LDLRAD4-215ENST00000590371 CDC42BPBQ9Y5S2 1711 aa29.2■■■□□ 2.27
LDLRAD4-215ENST00000590371 PREX2Q70Z35 1606 aa29.2■■■□□ 2.26
LDLRAD4-215ENST00000590371 VPS8Q8N3P4 1428 aa29.18■■■□□ 2.26
LDLRAD4-215ENST00000590371 CDC42BPAQ5VT25 1732 aa29.16■■■□□ 2.26
LDLRAD4-215ENST00000590371 POGZQ7Z3K3 1410 aa29.14■■■□□ 2.26
LDLRAD4-215ENST00000590371 EHBP1L1Q8N3D4 1523 aa29.14■■■□□ 2.25
LDLRAD4-215ENST00000590371 ZMYM4Q5VZL5 1548 aa29.12■■■□□ 2.25
LDLRAD4-215ENST00000590371 ARHGEF40Q8TER5 1519 aa29.12■■■□□ 2.25
LDLRAD4-215ENST00000590371 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
LDLRAD4-215ENST00000590371 ZFYVE16Q7Z3T8 1539 aa29.09■■■□□ 2.25
LDLRAD4-215ENST00000590371 TIAM1Q13009 1591 aa29.07■■■□□ 2.24
LDLRAD4-215ENST00000590371 ZNF777Q9ULD5 760 aaPredicted RBP29.07■■■□□ 2.24
LDLRAD4-215ENST00000590371 ZNF518AQ6AHZ1 1483 aa29.06■■■□□ 2.24
LDLRAD4-215ENST00000590371 MAGI2Q86UL8 1455 aa29.06■■■□□ 2.24
LDLRAD4-215ENST00000590371 ARID4BQ4LE39 1312 aaPredicted RBP29.06■■■□□ 2.24
LDLRAD4-215ENST00000590371 GPATCH8Q9UKJ3 1502 aaKnown RBP29.05■■■□□ 2.24
LDLRAD4-215ENST00000590371 ABCC1P33527 1531 aa29.04■■■□□ 2.24
LDLRAD4-215ENST00000590371 MYT1LQ9UL68 1186 aa29.04■■■□□ 2.24
LDLRAD4-215ENST00000590371 YEATS2Q9ULM3 1422 aa29.03■■■□□ 2.24
LDLRAD4-215ENST00000590371 ITSN2Q9NZM3 1697 aa29.02■■■□□ 2.24
LDLRAD4-215ENST00000590371 AFAP1Q8N556 730 aa29.01■■■□□ 2.23
LDLRAD4-215ENST00000590371 CFDP1Q9UEE9 299 aaPredicted RBP29.01■■■□□ 2.23
LDLRAD4-215ENST00000590371 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
LDLRAD4-215ENST00000590371 KDM5CP41229 1560 aa28.98■■■□□ 2.23
LDLRAD4-215ENST00000590371 SAMD9LQ8IVG5 1584 aa28.98■■■□□ 2.23
LDLRAD4-215ENST00000590371 ARHGEF12Q9NZN5 1544 aa28.96■■■□□ 2.23
LDLRAD4-215ENST00000590371 HECW2Q9P2P5 1572 aa28.96■■■□□ 2.23
LDLRAD4-215ENST00000590371 TRAPPC8Q9Y2L5 1435 aa28.95■■■□□ 2.23
LDLRAD4-215ENST00000590371 BCORL1Q5H9F3 1711 aa28.94■■■□□ 2.22
LDLRAD4-215ENST00000590371 SYCP2Q9BX26 1530 aa28.94■■■□□ 2.22
LDLRAD4-215ENST00000590371 NCOA2Q15596 1464 aa28.93■■■□□ 2.22
LDLRAD4-215ENST00000590371 LRRC9Q6ZRR7 1453 aa28.93■■■□□ 2.22
LDLRAD4-215ENST00000590371 APLP2Q06481 763 aa28.93■■■□□ 2.22
LDLRAD4-215ENST00000590371 PLEKHH2Q8IVE3 1493 aa28.92■■■□□ 2.22
LDLRAD4-215ENST00000590371 MAP3K1Q13233 1512 aa28.92■■■□□ 2.22
LDLRAD4-215ENST00000590371 ATP10AO60312 1499 aa28.91■■■□□ 2.22
LDLRAD4-215ENST00000590371 ADAMTSL3P82987 1691 aa28.9■■■□□ 2.22
LDLRAD4-215ENST00000590371 C9orf84Q5VXU9 1444 aa28.9■■■□□ 2.22
LDLRAD4-215ENST00000590371 HNRNPMP52272 730 aaKnown RBP eCLIP28.89■■■□□ 2.224e-6■■■■□ 23.4
LDLRAD4-215ENST00000590371 MLH3Q9UHC1 1453 aa28.88■■■□□ 2.21
LDLRAD4-215ENST00000590371 SIGLEC1Q9BZZ2 1709 aa28.87■■■□□ 2.21
LDLRAD4-215ENST00000590371 KIAA1107Q9UPP5 1409 aa28.86■■■□□ 2.21
LDLRAD4-215ENST00000590371 DIP2CQ9Y2E4 1556 aa28.85■■■□□ 2.21
LDLRAD4-215ENST00000590371 KANK4Q5T7N3 995 aaPredicted RBP28.85■■■□□ 2.21
LDLRAD4-215ENST00000590371 MADDQ8WXG6 1647 aa28.84■■■□□ 2.21
LDLRAD4-215ENST00000590371 ABCA6Q8N139 1617 aa28.83■■■□□ 2.21
LDLRAD4-215ENST00000590371 MLECQ14165 292 aa28.83■■■□□ 2.21
LDLRAD4-215ENST00000590371 ZNF644Q9H582 1327 aaPredicted RBP28.82■■■□□ 2.2
LDLRAD4-215ENST00000590371 KIDINS220Q9ULH0 1771 aa28.81■■■□□ 2.2
LDLRAD4-215ENST00000590371 SPAG9O60271 1321 aaKnown RBP28.81■■■□□ 2.2
LDLRAD4-215ENST00000590371 RIMS1Q86UR5 1692 aaKnown RBP28.79■■■□□ 2.2
LDLRAD4-215ENST00000590371 PTPRMP28827 1452 aa28.78■■■□□ 2.2
LDLRAD4-215ENST00000590371 CAMSAP2Q08AD1 1489 aa28.76■■■□□ 2.19
LDLRAD4-215ENST00000590371 REREQ9P2R6 1566 aa28.75■■■□□ 2.19
LDLRAD4-215ENST00000590371 ATP7AQ04656 1500 aa28.74■■■□□ 2.19
LDLRAD4-215ENST00000590371 FER1L4A9Z1Z3 1794 aa28.74■■■□□ 2.19
LDLRAD4-215ENST00000590371 INO80Q9ULG1 1556 aaPredicted RBP28.72■■■□□ 2.19
LDLRAD4-215ENST00000590371 MBD5Q9P267 1494 aa28.72■■■□□ 2.19
LDLRAD4-215ENST00000590371 MYOM3Q5VTT5 1437 aa28.69■■■□□ 2.18
LDLRAD4-215ENST00000590371 PLPPR3Q6T4P5 718 aa28.68■■■□□ 2.18
LDLRAD4-215ENST00000590371 CCDC141Q6ZP82 1450 aa28.67■■■□□ 2.18
LDLRAD4-215ENST00000590371 AGLP35573 1532 aa28.66■■■□□ 2.18
LDLRAD4-215ENST00000590371 RSPH4AQ5TD94 716 aa28.65■■■□□ 2.18
LDLRAD4-215ENST00000590371 MIA2Q96PC5 1412 aa28.63■■■□□ 2.17
LDLRAD4-215ENST00000590371 ARHGEF5Q12774 1597 aa28.62■■■□□ 2.17
LDLRAD4-215ENST00000590371 ADGBQ8N7X0 1667 aa28.61■■■□□ 2.17
LDLRAD4-215ENST00000590371 A2MP01023 1474 aa28.61■■■□□ 2.17
LDLRAD4-215ENST00000590371 ESF1Q9H501 851 aaKnown RBP28.61■■■□□ 2.17
LDLRAD4-215ENST00000590371 RTEL1-TNFRSF6BF6WH68 1400 aa28.6■■■□□ 2.17
LDLRAD4-215ENST00000590371 TSPY4P0CV99 314 aa28.58■■■□□ 2.17
LDLRAD4-215ENST00000590371 TSPY10P0CW01 314 aa28.58■■■□□ 2.17
LDLRAD4-215ENST00000590371 PLXNC1O60486 1568 aa28.55■■■□□ 2.16
LDLRAD4-215ENST00000590371 PTPN23Q9H3S7 1636 aa28.53■■■□□ 2.16
LDLRAD4-215ENST00000590371 FGD6Q6ZV73 1430 aa28.49■■■□□ 2.15
LDLRAD4-215ENST00000590371 CEBPAP49715 358 aaPredicted RBP28.48■■■□□ 2.15
LDLRAD4-215ENST00000590371 DHX29Q7Z478 1369 aaKnown RBP28.48■■■□□ 2.15
LDLRAD4-215ENST00000590371 GGT6Q6P531 493 aa28.47■■■□□ 2.15
LDLRAD4-215ENST00000590371 CNTLNQ9NXG0 1405 aa28.46■■■□□ 2.15
LDLRAD4-215ENST00000590371 MAST1Q9Y2H9 1570 aa28.45■■■□□ 2.15
LDLRAD4-215ENST00000590371 C3P01024 1663 aa28.44■■■□□ 2.14
LDLRAD4-215ENST00000590371 TCOF1Q13428 1488 aaKnown RBP28.41■■■□□ 2.14
LDLRAD4-215ENST00000590371 LMTK3Q96Q04 1460 aa28.41■■■□□ 2.14
LDLRAD4-215ENST00000590371 CROCC2H7BZ55 1655 aa28.4■■■□□ 2.14
LDLRAD4-215ENST00000590371 CLTCQ00610 1675 aaKnown RBP28.4■■■□□ 2.14
LDLRAD4-215ENST00000590371 KIF3BO15066 747 aa28.4■■■□□ 2.14
LDLRAD4-215ENST00000590371 MROH2AA6NES4 1674 aa28.39■■■□□ 2.14
LDLRAD4-215ENST00000590371 PREX1Q8TCU6 1659 aa28.38■■■□□ 2.13
LDLRAD4-215ENST00000590371 DNMT1P26358 1616 aaKnown RBP28.37■■■□□ 2.13
LDLRAD4-215ENST00000590371 ABCC5O15440 1437 aa28.36■■■□□ 2.13
LDLRAD4-215ENST00000590371 DAPK1P53355 1430 aa28.36■■■□□ 2.13
LDLRAD4-215ENST00000590371 SHANK2Q9UPX8 1470 aa28.35■■■□□ 2.13
LDLRAD4-215ENST00000590371 FAM50AQ14320 339 aaKnown RBP28.35■■■□□ 2.13
LDLRAD4-215ENST00000590371 PPP6R1Q9UPN7 881 aa28.35■■■□□ 2.13
LDLRAD4-215ENST00000590371 PPARGC1BQ86YN6 1023 aaKnown RBP28.34■■■□□ 2.13
LDLRAD4-215ENST00000590371 ZMYM3Q14202 1370 aa28.33■■■□□ 2.13
LDLRAD4-215ENST00000590371 SETD1BQ9UPS6 1966 aaKnown RBP28.33■■■□□ 2.13
LDLRAD4-215ENST00000590371 UHRF1BP1Q6BDS2 1440 aa28.3■■■□□ 2.12
LDLRAD4-215ENST00000590371 HSPA2P54652 639 aa28.3■■■□□ 2.12
LDLRAD4-215ENST00000590371 DUOX2Q9NRD8 1548 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms