RNA–Protein interactions for RNA: ENST00000590308.1

LDLRAD4-214, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

Gene LDLRAD4, Length 3,720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-214ENST00000590308 FAM161AQ3B820 660 aa17.44■□□□□ 0.38
LDLRAD4-214ENST00000590308 PDCL3Q9H2J4 239 aa17.44■□□□□ 0.38
LDLRAD4-214ENST00000590308 RNF123Q5XPI4 1314 aa17.42■□□□□ 0.38
LDLRAD4-214ENST00000590308 BCL11BQ9C0K0 894 aaPredicted RBP17.42■□□□□ 0.38
LDLRAD4-214ENST00000590308 AMER1Q5JTC6 1135 aaPredicted RBP17.41■□□□□ 0.38
LDLRAD4-214ENST00000590308 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
LDLRAD4-214ENST00000590308 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
LDLRAD4-214ENST00000590308 ESPNB1AK53 854 aa17.41■□□□□ 0.38
LDLRAD4-214ENST00000590308 CCDC7Q96M83 1385 aa17.39■□□□□ 0.37
LDLRAD4-214ENST00000590308 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
LDLRAD4-214ENST00000590308 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
LDLRAD4-214ENST00000590308 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
LDLRAD4-214ENST00000590308 KIAA1211Q6ZU35 1233 aa17.37■□□□□ 0.37
LDLRAD4-214ENST00000590308 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
LDLRAD4-214ENST00000590308 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
LDLRAD4-214ENST00000590308 TPM2P07951 284 aa17.36■□□□□ 0.37
LDLRAD4-214ENST00000590308 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
LDLRAD4-214ENST00000590308 BBXQ8WY36 941 aaPredicted RBP17.35■□□□□ 0.37
LDLRAD4-214ENST00000590308 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
LDLRAD4-214ENST00000590308 SMARCA2P51531 1590 aa17.34■□□□□ 0.37
LDLRAD4-214ENST00000590308 PHLDB1Q86UU1 1377 aa17.33■□□□□ 0.37
LDLRAD4-214ENST00000590308 CDCA7LQ96GN5 454 aa17.33■□□□□ 0.36
LDLRAD4-214ENST00000590308 KIF7Q2M1P5 1343 aa17.33■□□□□ 0.36
LDLRAD4-214ENST00000590308 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
LDLRAD4-214ENST00000590308 RRP7BPQ9NSQ0 103 aa17.32■□□□□ 0.36
LDLRAD4-214ENST00000590308 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
LDLRAD4-214ENST00000590308 FOXD1Q16676 465 aa17.32■□□□□ 0.36
LDLRAD4-214ENST00000590308 PDIA4P13667 645 aaKnown RBP17.31■□□□□ 0.36
LDLRAD4-214ENST00000590308 UPF2Q9HAU5 1272 aaKnown RBP17.29■□□□□ 0.36
LDLRAD4-214ENST00000590308 PNISRQ8TF01 805 aaKnown RBP17.29■□□□□ 0.36
LDLRAD4-214ENST00000590308 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
LDLRAD4-214ENST00000590308 MRE11P49959 708 aa17.28■□□□□ 0.36
LDLRAD4-214ENST00000590308 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
LDLRAD4-214ENST00000590308 MSNP26038 577 aaKnown RBP17.26■□□□□ 0.35
LDLRAD4-214ENST00000590308 C8orf34Q49A92 452 aa17.26■□□□□ 0.35
LDLRAD4-214ENST00000590308 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
LDLRAD4-214ENST00000590308 CENPQQ7L2Z9 268 aaPredicted RBP17.26■□□□□ 0.35
LDLRAD4-214ENST00000590308 PRDM4Q9UKN5 801 aa17.26■□□□□ 0.35
LDLRAD4-214ENST00000590308 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
LDLRAD4-214ENST00000590308 R3HCC1Q9Y3T6 440 aaKnown RBP17.25■□□□□ 0.35
LDLRAD4-214ENST00000590308 TRAK2O60296 914 aa17.25■□□□□ 0.35
LDLRAD4-214ENST00000590308 C20orf194Q5TEA3 1177 aa17.25■□□□□ 0.35
LDLRAD4-214ENST00000590308 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
LDLRAD4-214ENST00000590308 GRPEL1Q9HAV7 217 aa17.24■□□□□ 0.35
LDLRAD4-214ENST00000590308 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
LDLRAD4-214ENST00000590308 CHMP4BQ9H444 224 aaKnown RBP17.22■□□□□ 0.35
LDLRAD4-214ENST00000590308 ERBB4Q15303 1308 aa17.22■□□□□ 0.35
LDLRAD4-214ENST00000590308 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
LDLRAD4-214ENST00000590308 MCM4P33991 863 aa17.2■□□□□ 0.34
LDLRAD4-214ENST00000590308 AEBP2Q6ZN18 517 aaPredicted RBP17.2■□□□□ 0.34
LDLRAD4-214ENST00000590308 CCDC18Q5T9S5 1454 aa17.19■□□□□ 0.34
LDLRAD4-214ENST00000590308 NAP1L2Q9ULW6 460 aaPredicted RBP17.17■□□□□ 0.34
LDLRAD4-214ENST00000590308 NCLP19338 710 aaKnown RBP17.17■□□□□ 0.34
LDLRAD4-214ENST00000590308 MAP7D2Q96T17 732 aa17.16■□□□□ 0.34
LDLRAD4-214ENST00000590308 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
LDLRAD4-214ENST00000590308 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.15■□□□□ 0.34
LDLRAD4-214ENST00000590308 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
LDLRAD4-214ENST00000590308 NCOA1Q15788 1441 aa17.14■□□□□ 0.34
LDLRAD4-214ENST00000590308 PDE3BQ13370 1112 aa17.14■□□□□ 0.33
LDLRAD4-214ENST00000590308 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
LDLRAD4-214ENST00000590308 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.14■□□□□ 0.33
LDLRAD4-214ENST00000590308 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
LDLRAD4-214ENST00000590308 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
LDLRAD4-214ENST00000590308 FSD2A1L4K1 749 aa17.12■□□□□ 0.33
LDLRAD4-214ENST00000590308 SEC24BO95487 1268 aa17.12■□□□□ 0.33
LDLRAD4-214ENST00000590308 CDK11BP21127 795 aaKnown RBP17.12■□□□□ 0.33
LDLRAD4-214ENST00000590308 MAPK8IP2Q13387 824 aaPredicted RBP17.12■□□□□ 0.33
LDLRAD4-214ENST00000590308 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
LDLRAD4-214ENST00000590308 PLCD3Q8N3E9 789 aa17.12■□□□□ 0.33
LDLRAD4-214ENST00000590308 UQCRHLA0A096LP55 91 aa17.11■□□□□ 0.33
LDLRAD4-214ENST00000590308 UQCRHP07919 91 aa17.11■□□□□ 0.33
LDLRAD4-214ENST00000590308 VGLL3A8MV65 326 aa17.09■□□□□ 0.33
LDLRAD4-214ENST00000590308 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
LDLRAD4-214ENST00000590308 ARHGAP35Q9NRY4 1499 aa17.09■□□□□ 0.33
LDLRAD4-214ENST00000590308 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.33
LDLRAD4-214ENST00000590308 TBC1D2Q9BYX2 928 aa17.08■□□□□ 0.32
LDLRAD4-214ENST00000590308 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.32
LDLRAD4-214ENST00000590308 SMAP1Q8IYB5 467 aaPredicted RBP17.08■□□□□ 0.32
LDLRAD4-214ENST00000590308 RIPK4P57078 832 aa17.07■□□□□ 0.32
LDLRAD4-214ENST00000590308 CHMP5Q9NZZ3 219 aa17.07■□□□□ 0.32
LDLRAD4-214ENST00000590308 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
LDLRAD4-214ENST00000590308 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
LDLRAD4-214ENST00000590308 ZSCAN30Q86W11 494 aa17.06■□□□□ 0.32
LDLRAD4-214ENST00000590308 PAXIP1Q6ZW49 1069 aaPredicted RBP17.06■□□□□ 0.32
LDLRAD4-214ENST00000590308 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
LDLRAD4-214ENST00000590308 DDX11L8A8MPP1 907 aa17.05■□□□□ 0.32
LDLRAD4-214ENST00000590308 XPCQ01831 940 aaPredicted RBP17.05■□□□□ 0.32
LDLRAD4-214ENST00000590308 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
LDLRAD4-214ENST00000590308 FMN1Q68DA7 1419 aa17.04■□□□□ 0.32
LDLRAD4-214ENST00000590308 OFD1O75665 1012 aa17.04■□□□□ 0.32
LDLRAD4-214ENST00000590308 NASPP49321 788 aaPredicted RBP17.04■□□□□ 0.32
LDLRAD4-214ENST00000590308 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
LDLRAD4-214ENST00000590308 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
LDLRAD4-214ENST00000590308 GTF2E1P29083 439 aaPredicted RBP17.02■□□□□ 0.32
LDLRAD4-214ENST00000590308 CBX1P83916 185 aa17.02■□□□□ 0.32
LDLRAD4-214ENST00000590308 MTUS2Q5JR59 1369 aa17.02■□□□□ 0.32
LDLRAD4-214ENST00000590308 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
LDLRAD4-214ENST00000590308 HSCBQ8IWL3 235 aa17.01■□□□□ 0.31
LDLRAD4-214ENST00000590308 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.31
LDLRAD4-214ENST00000590308 NLRP13Q86W25 1043 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms