RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ARHGAP5Q13017 1502 aa19.16■□□□□ 0.66
TPM4-212ENST00000590180 MYO5CQ9NQX4 1742 aa19.15■□□□□ 0.66
TPM4-212ENST00000590180 AFAP1Q8N556 730 aa19.14■□□□□ 0.65
TPM4-212ENST00000590180 FRMPD1Q5SYB0 1578 aa19.11■□□□□ 0.65
TPM4-212ENST00000590180 CFDP1Q9UEE9 299 aaPredicted RBP19.11■□□□□ 0.65
TPM4-212ENST00000590180 CCNB3Q8WWL7 1395 aa19.1■□□□□ 0.65
TPM4-212ENST00000590180 POGZQ7Z3K3 1410 aa19.09■□□□□ 0.65
TPM4-212ENST00000590180 RICTORQ6R327 1708 aa19.08■□□□□ 0.65
TPM4-212ENST00000590180 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.64
TPM4-212ENST00000590180 YEATS2Q9ULM3 1422 aa19.07■□□□□ 0.64
TPM4-212ENST00000590180 GPATCH8Q9UKJ3 1502 aaKnown RBP19.06■□□□□ 0.64
TPM4-212ENST00000590180 MAGI2Q86UL8 1455 aa19.06■□□□□ 0.64
TPM4-212ENST00000590180 HNRNPMP52272 730 aaKnown RBP eCLIP19.06■□□□□ 0.64
TPM4-212ENST00000590180 CDC42BPBQ9Y5S2 1711 aa19.05■□□□□ 0.64
TPM4-212ENST00000590180 MLECQ14165 292 aa19.05■□□□□ 0.64
TPM4-212ENST00000590180 APLP2Q06481 763 aa19.04■□□□□ 0.64
TPM4-212ENST00000590180 ZFYVE16Q7Z3T8 1539 aa19.04■□□□□ 0.64
TPM4-212ENST00000590180 ZNF518AQ6AHZ1 1483 aa19.03■□□□□ 0.64
TPM4-212ENST00000590180 ZMYM4Q5VZL5 1548 aa19.02■□□□□ 0.64
TPM4-212ENST00000590180 PREX2Q70Z35 1606 aa19.02■□□□□ 0.64
TPM4-212ENST00000590180 TRAPPC8Q9Y2L5 1435 aa19.01■□□□□ 0.63
TPM4-212ENST00000590180 ARHGEF12Q9NZN5 1544 aa19■□□□□ 0.63
TPM4-212ENST00000590180 CDC42BPAQ5VT25 1732 aa19■□□□□ 0.63
TPM4-212ENST00000590180 ATP10AO60312 1499 aa19■□□□□ 0.63
TPM4-212ENST00000590180 EHBP1L1Q8N3D4 1523 aa19■□□□□ 0.63
TPM4-212ENST00000590180 ARHGEF40Q8TER5 1519 aa19■□□□□ 0.63
TPM4-212ENST00000590180 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
TPM4-212ENST00000590180 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
TPM4-212ENST00000590180 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
TPM4-212ENST00000590180 SPAG9O60271 1321 aaKnown RBP18.97■□□□□ 0.63
TPM4-212ENST00000590180 ABCC1P33527 1531 aa18.96■□□□□ 0.63
TPM4-212ENST00000590180 TIAM1Q13009 1591 aa18.95■□□□□ 0.62
TPM4-212ENST00000590180 C9orf84Q5VXU9 1444 aa18.94■□□□□ 0.62
TPM4-212ENST00000590180 NCOA2Q15596 1464 aa18.94■□□□□ 0.62
TPM4-212ENST00000590180 PLEKHH2Q8IVE3 1493 aa18.94■□□□□ 0.62
TPM4-212ENST00000590180 MLH3Q9UHC1 1453 aa18.94■□□□□ 0.62
TPM4-212ENST00000590180 KIAA1107Q9UPP5 1409 aa18.93■□□□□ 0.62
TPM4-212ENST00000590180 LRRC9Q6ZRR7 1453 aa18.93■□□□□ 0.62
TPM4-212ENST00000590180 KDM5CP41229 1560 aa18.93■□□□□ 0.62
TPM4-212ENST00000590180 SAMD9LQ8IVG5 1584 aa18.93■□□□□ 0.62
TPM4-212ENST00000590180 BCORL1Q5H9F3 1711 aa18.91■□□□□ 0.62
TPM4-212ENST00000590180 PTPRMP28827 1452 aa18.91■□□□□ 0.62
TPM4-212ENST00000590180 SYCP2Q9BX26 1530 aa18.91■□□□□ 0.62
TPM4-212ENST00000590180 ADAMTSL3P82987 1691 aa18.91■□□□□ 0.62
TPM4-212ENST00000590180 ITSN2Q9NZM3 1697 aa18.91■□□□□ 0.62
TPM4-212ENST00000590180 SUPT6HQ7KZ85 1726 aaKnown RBP18.9■□□□□ 0.62
TPM4-212ENST00000590180 HECW2Q9P2P5 1572 aa18.89■□□□□ 0.62
TPM4-212ENST00000590180 MAP3K1Q13233 1512 aa18.89■□□□□ 0.61
TPM4-212ENST00000590180 RSPH4AQ5TD94 716 aa18.88■□□□□ 0.61
TPM4-212ENST00000590180 ESF1Q9H501 851 aaKnown RBP18.88■□□□□ 0.61
TPM4-212ENST00000590180 MADDQ8WXG6 1647 aa18.86■□□□□ 0.61
TPM4-212ENST00000590180 SIGLEC1Q9BZZ2 1709 aa18.85■□□□□ 0.61
TPM4-212ENST00000590180 DIP2CQ9Y2E4 1556 aa18.85■□□□□ 0.61
TPM4-212ENST00000590180 TSPY4P0CV99 314 aa18.84■□□□□ 0.61
TPM4-212ENST00000590180 TSPY10P0CW01 314 aa18.84■□□□□ 0.61
TPM4-212ENST00000590180 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
TPM4-212ENST00000590180 CEBPAP49715 358 aaPredicted RBP18.83■□□□□ 0.6
TPM4-212ENST00000590180 ABCA6Q8N139 1617 aa18.82■□□□□ 0.6
TPM4-212ENST00000590180 KIDINS220Q9ULH0 1771 aa18.82■□□□□ 0.6
TPM4-212ENST00000590180 RIMS1Q86UR5 1692 aaKnown RBP18.82■□□□□ 0.6
TPM4-212ENST00000590180 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
TPM4-212ENST00000590180 GGT6Q6P531 493 aa18.79■□□□□ 0.6
TPM4-212ENST00000590180 ATP7AQ04656 1500 aa18.79■□□□□ 0.6
TPM4-212ENST00000590180 REREQ9P2R6 1566 aa18.77■□□□□ 0.6
TPM4-212ENST00000590180 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.6
TPM4-212ENST00000590180 AGLP35573 1532 aa18.77■□□□□ 0.6
TPM4-212ENST00000590180 A2MP01023 1474 aa18.77■□□□□ 0.59
TPM4-212ENST00000590180 RTEL1-TNFRSF6BF6WH68 1400 aa18.76■□□□□ 0.59
TPM4-212ENST00000590180 CCDC141Q6ZP82 1450 aa18.76■□□□□ 0.59
TPM4-212ENST00000590180 MIA2Q96PC5 1412 aa18.75■□□□□ 0.59
TPM4-212ENST00000590180 FER1L4A9Z1Z3 1794 aa18.74■□□□□ 0.59
TPM4-212ENST00000590180 DHX29Q7Z478 1369 aaKnown RBP18.73■□□□□ 0.59
TPM4-212ENST00000590180 KIF3BO15066 747 aa18.72■□□□□ 0.59
TPM4-212ENST00000590180 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
TPM4-212ENST00000590180 HSPA2P54652 639 aa18.71■□□□□ 0.59
TPM4-212ENST00000590180 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
TPM4-212ENST00000590180 PPP6R1Q9UPN7 881 aa18.68■□□□□ 0.58
TPM4-212ENST00000590180 ARHGEF5Q12774 1597 aa18.68■□□□□ 0.58
TPM4-212ENST00000590180 CNTLNQ9NXG0 1405 aa18.67■□□□□ 0.58
TPM4-212ENST00000590180 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
TPM4-212ENST00000590180 ZMYM3Q14202 1370 aa18.67■□□□□ 0.58
TPM4-212ENST00000590180 ADGBQ8N7X0 1667 aa18.65■□□□□ 0.58
TPM4-212ENST00000590180 FGD6Q6ZV73 1430 aa18.65■□□□□ 0.58
TPM4-212ENST00000590180 CHIC2Q9UKJ5 165 aa18.64■□□□□ 0.57
TPM4-212ENST00000590180 LMTK3Q96Q04 1460 aa18.64■□□□□ 0.57
TPM4-212ENST00000590180 RRP7BPQ9NSQ0 103 aa18.63■□□□□ 0.57
TPM4-212ENST00000590180 PLXNC1O60486 1568 aa18.63■□□□□ 0.57
TPM4-212ENST00000590180 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
TPM4-212ENST00000590180 PTPN23Q9H3S7 1636 aa18.62■□□□□ 0.57
TPM4-212ENST00000590180 SETD1BQ9UPS6 1966 aaKnown RBP18.62■□□□□ 0.57
TPM4-212ENST00000590180 ABCC5O15440 1437 aa18.61■□□□□ 0.57
TPM4-212ENST00000590180 UHRF1BP1Q6BDS2 1440 aa18.58■□□□□ 0.57
TPM4-212ENST00000590180 DAPK1P53355 1430 aa18.57■□□□□ 0.56
TPM4-212ENST00000590180 C3P01024 1663 aa18.57■□□□□ 0.56
TPM4-212ENST00000590180 TCOF1Q13428 1488 aaKnown RBP18.57■□□□□ 0.56
TPM4-212ENST00000590180 MAST1Q9Y2H9 1570 aa18.56■□□□□ 0.56
TPM4-212ENST00000590180 CLTCQ00610 1675 aaKnown RBP18.55■□□□□ 0.56
TPM4-212ENST00000590180 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
TPM4-212ENST00000590180 FBXO31Q5XUX0 539 aaPredicted RBP18.54■□□□□ 0.56
TPM4-212ENST00000590180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.54■□□□□ 0.561e-10■□□□□ 10.7
Retrieved 100 of 20,778 RNA–protein pairs in 238.3 ms