RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 HSPA2P54652 639 aa23.66■■□□□ 1.38
SAFB2-205ENST00000590000 FBXO41Q8TF61 875 aa23.66■■□□□ 1.38
SAFB2-205ENST00000590000 MAGI2Q86UL8 1455 aa23.62■■□□□ 1.37
SAFB2-205ENST00000590000 PLPPR3Q6T4P5 718 aa23.62■■□□□ 1.37
SAFB2-205ENST00000590000 MYO5CQ9NQX4 1742 aa23.62■■□□□ 1.37
SAFB2-205ENST00000590000 FER1L4A9Z1Z3 1794 aa23.61■■□□□ 1.37
SAFB2-205ENST00000590000 MLECQ14165 292 aa23.61■■□□□ 1.37
SAFB2-205ENST00000590000 ARHGEF12Q9NZN5 1544 aa23.59■■□□□ 1.37
SAFB2-205ENST00000590000 UBTFP17480 764 aaKnown RBP23.57■■□□□ 1.36
SAFB2-205ENST00000590000 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
SAFB2-205ENST00000590000 FMN1Q68DA7 1419 aa23.57■■□□□ 1.36
SAFB2-205ENST00000590000 ATP1B4Q9UN42 357 aaPredicted RBP23.56■■□□□ 1.36
SAFB2-205ENST00000590000 ATP10AO60312 1499 aa23.55■■□□□ 1.36
SAFB2-205ENST00000590000 TROQ12816 1431 aaPredicted RBP23.54■■□□□ 1.36
SAFB2-205ENST00000590000 CDC42BPBQ9Y5S2 1711 aa23.53■■□□□ 1.36
SAFB2-205ENST00000590000 KDM5CP41229 1560 aa23.52■■□□□ 1.36
SAFB2-205ENST00000590000 C9orf84Q5VXU9 1444 aa23.51■■□□□ 1.35
SAFB2-205ENST00000590000 EFCAB2Q5VUJ9 269 aa23.51■■□□□ 1.35
SAFB2-205ENST00000590000 AFAP1Q8N556 730 aa23.51■■□□□ 1.35
SAFB2-205ENST00000590000 CEBPAP49715 358 aaPredicted RBP23.5■■□□□ 1.35
SAFB2-205ENST00000590000 DIP2CQ9Y2E4 1556 aa23.49■■□□□ 1.35
SAFB2-205ENST00000590000 ARHGAP5Q13017 1502 aa23.48■■□□□ 1.35
SAFB2-205ENST00000590000 ABCA6Q8N139 1617 aa23.47■■□□□ 1.35
SAFB2-205ENST00000590000 ZNF518AQ6AHZ1 1483 aa23.45■■□□□ 1.34
SAFB2-205ENST00000590000 PREX1Q8TCU6 1659 aa23.44■■□□□ 1.34
SAFB2-205ENST00000590000 TRAPPC8Q9Y2L5 1435 aa23.43■■□□□ 1.34
SAFB2-205ENST00000590000 STRCQ7RTU9 1775 aa23.43■■□□□ 1.34
SAFB2-205ENST00000590000 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
SAFB2-205ENST00000590000 ABCC1P33527 1531 aa23.41■■□□□ 1.34
SAFB2-205ENST00000590000 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
SAFB2-205ENST00000590000 REREQ9P2R6 1566 aa23.4■■□□□ 1.34
SAFB2-205ENST00000590000 ITSN2Q9NZM3 1697 aa23.39■■□□□ 1.34
SAFB2-205ENST00000590000 CASKIN1Q8WXD9 1431 aa23.39■■□□□ 1.33
SAFB2-205ENST00000590000 CDC42BPAQ5VT25 1732 aa23.39■■□□□ 1.33
SAFB2-205ENST00000590000 MLH3Q9UHC1 1453 aa23.38■■□□□ 1.33
SAFB2-205ENST00000590000 KIDINS220Q9ULH0 1771 aa23.37■■□□□ 1.33
SAFB2-205ENST00000590000 CLIP1P30622 1438 aa23.37■■□□□ 1.33
SAFB2-205ENST00000590000 C3P01024 1663 aa23.37■■□□□ 1.33
SAFB2-205ENST00000590000 CERKQ8TCT0 537 aa23.36■■□□□ 1.33
SAFB2-205ENST00000590000 AGLP35573 1532 aa23.32■■□□□ 1.32
SAFB2-205ENST00000590000 CCDC18Q5T9S5 1454 aa23.3■■□□□ 1.32
SAFB2-205ENST00000590000 SETD1BQ9UPS6 1966 aaKnown RBP23.3■■□□□ 1.32
SAFB2-205ENST00000590000 SAMD9LQ8IVG5 1584 aa23.3■■□□□ 1.32
SAFB2-205ENST00000590000 UHRF1BP1Q6BDS2 1440 aa23.25■■□□□ 1.31
SAFB2-205ENST00000590000 GPATCH8Q9UKJ3 1502 aaKnown RBP23.25■■□□□ 1.31
SAFB2-205ENST00000590000 MYT1LQ9UL68 1186 aa23.25■■□□□ 1.31
SAFB2-205ENST00000590000 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
SAFB2-205ENST00000590000 SYCP2Q9BX26 1530 aa23.23■■□□□ 1.31
SAFB2-205ENST00000590000 HNRNPMP52272 730 aaKnown RBP eCLIP23.18■■□□□ 1.3
SAFB2-205ENST00000590000 SUPT6HQ7KZ85 1726 aaKnown RBP23.17■■□□□ 1.3
SAFB2-205ENST00000590000 ZNF777Q9ULD5 760 aaPredicted RBP23.17■■□□□ 1.3
SAFB2-205ENST00000590000 LTBP4Q8N2S1 1624 aa23.17■■□□□ 1.3
SAFB2-205ENST00000590000 INO80Q9ULG1 1556 aaPredicted RBP23.16■■□□□ 1.3
SAFB2-205ENST00000590000 PTPRTO14522 1441 aa23.15■■□□□ 1.3
SAFB2-205ENST00000590000 PLXNC1O60486 1568 aa23.14■■□□□ 1.3
SAFB2-205ENST00000590000 MROH2AA6NES4 1674 aa23.13■■□□□ 1.29
SAFB2-205ENST00000590000 NCOA1Q15788 1441 aa23.13■■□□□ 1.29
SAFB2-205ENST00000590000 ATP7AQ04656 1500 aa23.13■■□□□ 1.29
SAFB2-205ENST00000590000 CLTCQ00610 1675 aaKnown RBP23.1■■□□□ 1.29
SAFB2-205ENST00000590000 CNTLNQ9NXG0 1405 aa23.1■■□□□ 1.29
SAFB2-205ENST00000590000 SPAG9O60271 1321 aaKnown RBP23.09■■□□□ 1.29
SAFB2-205ENST00000590000 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
SAFB2-205ENST00000590000 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.29
SAFB2-205ENST00000590000 KIAA1107Q9UPP5 1409 aa23.08■■□□□ 1.29
SAFB2-205ENST00000590000 DMRT2Q9Y5R5 561 aa23.08■■□□□ 1.29
SAFB2-205ENST00000590000 CAMSAP1Q5T5Y3 1602 aa23.08■■□□□ 1.28
SAFB2-205ENST00000590000 TIAM1Q13009 1591 aa23.07■■□□□ 1.28
SAFB2-205ENST00000590000 NPATQ14207 1427 aa23.07■■□□□ 1.28
SAFB2-205ENST00000590000 A2MP01023 1474 aa23.05■■□□□ 1.28
SAFB2-205ENST00000590000 MBD5Q9P267 1494 aa23.05■■□□□ 1.28
SAFB2-205ENST00000590000 ILDR2Q71H61 639 aa23.04■■□□□ 1.28
SAFB2-205ENST00000590000 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
SAFB2-205ENST00000590000 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
SAFB2-205ENST00000590000 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
SAFB2-205ENST00000590000 PTPRKQ15262 1439 aa23.03■■□□□ 1.28
SAFB2-205ENST00000590000 CCNB3Q8WWL7 1395 aa23.02■■□□□ 1.28
SAFB2-205ENST00000590000 ZNF142P52746 1687 aaPredicted RBP23.02■■□□□ 1.28
SAFB2-205ENST00000590000 NCKAP5LQ9HCH0 1330 aa23.01■■□□□ 1.27
SAFB2-205ENST00000590000 PLEKHH2Q8IVE3 1493 aa23■■□□□ 1.27
SAFB2-205ENST00000590000 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
SAFB2-205ENST00000590000 CEP170BQ9Y4F5 1589 aaPredicted RBP22.97■■□□□ 1.27
SAFB2-205ENST00000590000 ADGBQ8N7X0 1667 aa22.97■■□□□ 1.27
SAFB2-205ENST00000590000 GGT6Q6P531 493 aa22.96■■□□□ 1.27
SAFB2-205ENST00000590000 ZNF335Q9H4Z2 1342 aaPredicted RBP22.96■■□□□ 1.27
SAFB2-205ENST00000590000 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
SAFB2-205ENST00000590000 EHBP1L1Q8N3D4 1523 aa22.95■■□□□ 1.26
SAFB2-205ENST00000590000 DISP3Q9P2K9 1392 aa22.93■■□□□ 1.26
SAFB2-205ENST00000590000 CEP162Q5TB80 1403 aa22.92■■□□□ 1.26
SAFB2-205ENST00000590000 PLA2R1Q13018 1463 aa22.92■■□□□ 1.26
SAFB2-205ENST00000590000 IQSEC2Q5JU85 1478 aa22.92■■□□□ 1.26
SAFB2-205ENST00000590000 DNMT1P26358 1616 aaKnown RBP22.89■■□□□ 1.25
SAFB2-205ENST00000590000 RTEL1-TNFRSF6BF6WH68 1400 aa22.88■■□□□ 1.25
SAFB2-205ENST00000590000 SPATA31D1Q6ZQQ2 1576 aa22.87■■□□□ 1.25
SAFB2-205ENST00000590000 DHX29Q7Z478 1369 aaKnown RBP22.87■■□□□ 1.25
SAFB2-205ENST00000590000 NCOA2Q15596 1464 aa22.86■■□□□ 1.25
SAFB2-205ENST00000590000 FBXO31Q5XUX0 539 aaPredicted RBP22.86■■□□□ 1.25
SAFB2-205ENST00000590000 A2ML1A8K2U0 1454 aa22.85■■□□□ 1.25
SAFB2-205ENST00000590000 CAMSAP2Q08AD1 1489 aa22.85■■□□□ 1.25
SAFB2-205ENST00000590000 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
SAFB2-205ENST00000590000 CCDC141Q6ZP82 1450 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms