RNA–Protein interactions for RNA: ENST00000589969.1

NFIC-209, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-209ENST00000589969 MYO5CQ9NQX4 1742 aa33.53■■■□□ 2.96
NFIC-209ENST00000589969 PCF11O94913 1555 aaKnown RBP33.51■■■□□ 2.95
NFIC-209ENST00000589969 PTPRMP28827 1452 aa33.5■■■□□ 2.95
NFIC-209ENST00000589969 ZFYVE16Q7Z3T8 1539 aa33.5■■■□□ 2.95
NFIC-209ENST00000589969 BCORL1Q5H9F3 1711 aa33.5■■■□□ 2.95
NFIC-209ENST00000589969 LRRIQ1Q96JM4 1722 aa33.48■■■□□ 2.95
NFIC-209ENST00000589969 FYCO1Q9BQS8 1478 aa33.48■■■□□ 2.95
NFIC-209ENST00000589969 YEATS2Q9ULM3 1422 aa33.45■■■□□ 2.95
NFIC-209ENST00000589969 ARHGAP5Q13017 1502 aa33.45■■■□□ 2.95
NFIC-209ENST00000589969 MADDQ8WXG6 1647 aa33.39■■■□□ 2.94
NFIC-209ENST00000589969 ZNF518AQ6AHZ1 1483 aa33.39■■■□□ 2.94
NFIC-209ENST00000589969 ATP10AO60312 1499 aa33.36■■■□□ 2.93
NFIC-209ENST00000589969 AFAP1Q8N556 730 aa33.32■■■□□ 2.92
NFIC-209ENST00000589969 C9orf84Q5VXU9 1444 aa33.31■■■□□ 2.92
NFIC-209ENST00000589969 KDM5CP41229 1560 aa33.3■■■□□ 2.92
NFIC-209ENST00000589969 PREX2Q70Z35 1606 aa33.29■■■□□ 2.92
NFIC-209ENST00000589969 CDC42BPBQ9Y5S2 1711 aa33.29■■■□□ 2.92
NFIC-209ENST00000589969 RIMS1Q86UR5 1692 aaKnown RBP33.26■■■□□ 2.91
NFIC-209ENST00000589969 MLECQ14165 292 aa33.25■■■□□ 2.91
NFIC-209ENST00000589969 MYT1LQ9UL68 1186 aa33.25■■■□□ 2.91
NFIC-209ENST00000589969 SIGLEC1Q9BZZ2 1709 aa33.25■■■□□ 2.91
NFIC-209ENST00000589969 MLH3Q9UHC1 1453 aa33.22■■■□□ 2.91
NFIC-209ENST00000589969 ABCC1P33527 1531 aa33.22■■■□□ 2.91
NFIC-209ENST00000589969 TRAPPC8Q9Y2L5 1435 aa33.18■■■□□ 2.9
NFIC-209ENST00000589969 CDC42BPAQ5VT25 1732 aa33.17■■■□□ 2.9
NFIC-209ENST00000589969 CEP162Q5TB80 1403 aa33.17■■■□□ 2.9
NFIC-209ENST00000589969 ARHGEF12Q9NZN5 1544 aa33.17■■■□□ 2.9
NFIC-209ENST00000589969 MTUS2Q5JR59 1369 aa33.16■■■□□ 2.9
NFIC-209ENST00000589969 GPATCH8Q9UKJ3 1502 aaKnown RBP33.16■■■□□ 2.9
NFIC-209ENST00000589969 LMTK3Q96Q04 1460 aa33.14■■■□□ 2.9
NFIC-209ENST00000589969 REREQ9P2R6 1566 aa33.13■■■□□ 2.89
NFIC-209ENST00000589969 ZNF777Q9ULD5 760 aaPredicted RBP33.13■■■□□ 2.89
NFIC-209ENST00000589969 DIP2CQ9Y2E4 1556 aa33.13■■■□□ 2.89
NFIC-209ENST00000589969 FER1L4A9Z1Z3 1794 aa33.12■■■□□ 2.89
NFIC-209ENST00000589969 ITSN2Q9NZM3 1697 aa33.12■■■□□ 2.89
NFIC-209ENST00000589969 PLPPR3Q6T4P5 718 aa33.11■■■□□ 2.89
NFIC-209ENST00000589969 CCNB3Q8WWL7 1395 aa33.1■■■□□ 2.89
NFIC-209ENST00000589969 CFDP1Q9UEE9 299 aaPredicted RBP33.1■■■□□ 2.89
NFIC-209ENST00000589969 ILDR1Q86SU0 546 aaPredicted RBP33.08■■■□□ 2.89
NFIC-209ENST00000589969 PLEKHH2Q8IVE3 1493 aa33.06■■■□□ 2.88
NFIC-209ENST00000589969 KIAA1107Q9UPP5 1409 aa33.06■■■□□ 2.88
NFIC-209ENST00000589969 ABCA6Q8N139 1617 aa33.06■■■□□ 2.88
NFIC-209ENST00000589969 SAMD9LQ8IVG5 1584 aa33.05■■■□□ 2.88
NFIC-209ENST00000589969 AGLP35573 1532 aa33.03■■■□□ 2.88
NFIC-209ENST00000589969 HNRNPMP52272 730 aaKnown RBP eCLIP33.01■■■□□ 2.87
NFIC-209ENST00000589969 EHBP1L1Q8N3D4 1523 aa33.01■■■□□ 2.87
NFIC-209ENST00000589969 SYCP2Q9BX26 1530 aa33.01■■■□□ 2.87
NFIC-209ENST00000589969 SPAG9O60271 1321 aaKnown RBP33.01■■■□□ 2.87
NFIC-209ENST00000589969 KIDINS220Q9ULH0 1771 aa32.99■■■□□ 2.87
NFIC-209ENST00000589969 ESF1Q9H501 851 aaKnown RBP32.96■■■□□ 2.87
NFIC-209ENST00000589969 HSPA2P54652 639 aa32.95■■■□□ 2.87
NFIC-209ENST00000589969 CEBPAP49715 358 aaPredicted RBP32.94■■■□□ 2.86
NFIC-209ENST00000589969 TIAM1Q13009 1591 aa32.9■■■□□ 2.86
NFIC-209ENST00000589969 LOC105371045A0A1W2PR82 267 aa32.89■■■□□ 2.86
NFIC-209ENST00000589969 ATP7AQ04656 1500 aa32.87■■■□□ 2.85
NFIC-209ENST00000589969 CNTLNQ9NXG0 1405 aa32.87■■■□□ 2.85
NFIC-209ENST00000589969 PREX1Q8TCU6 1659 aa32.85■■■□□ 2.85
NFIC-209ENST00000589969 VPS8Q8N3P4 1428 aa32.84■■■□□ 2.85
NFIC-209ENST00000589969 INO80Q9ULG1 1556 aaPredicted RBP32.83■■■□□ 2.85
NFIC-209ENST00000589969 ZNF644Q9H582 1327 aaPredicted RBP32.83■■■□□ 2.85
NFIC-209ENST00000589969 UHRF1BP1Q6BDS2 1440 aa32.81■■■□□ 2.84
NFIC-209ENST00000589969 SETD1BQ9UPS6 1966 aaKnown RBP32.81■■■□□ 2.84
NFIC-209ENST00000589969 NCOA2Q15596 1464 aa32.8■■■□□ 2.84
NFIC-209ENST00000589969 MBD5Q9P267 1494 aa32.8■■■□□ 2.84
NFIC-209ENST00000589969 A2MP01023 1474 aa32.8■■■□□ 2.84
NFIC-209ENST00000589969 SUPT6HQ7KZ85 1726 aaKnown RBP32.79■■■□□ 2.84
NFIC-209ENST00000589969 C3P01024 1663 aa32.76■■■□□ 2.84
NFIC-209ENST00000589969 RSPH4AQ5TD94 716 aa32.76■■■□□ 2.83
NFIC-209ENST00000589969 FBXO41Q8TF61 875 aa32.76■■■□□ 2.83
NFIC-209ENST00000589969 RTEL1-TNFRSF6BF6WH68 1400 aa32.76■■■□□ 2.83
NFIC-209ENST00000589969 PLXNC1O60486 1568 aa32.75■■■□□ 2.83
NFIC-209ENST00000589969 PPP6R1Q9UPN7 881 aa32.71■■■□□ 2.83
NFIC-209ENST00000589969 LRRC9Q6ZRR7 1453 aa32.7■■■□□ 2.83
NFIC-209ENST00000589969 DMRT2Q9Y5R5 561 aa32.7■■■□□ 2.83
NFIC-209ENST00000589969 ZMYM3Q14202 1370 aa32.69■■■□□ 2.82
NFIC-209ENST00000589969 ADGBQ8N7X0 1667 aa32.69■■■□□ 2.82
NFIC-209ENST00000589969 NPATQ14207 1427 aa32.68■■■□□ 2.82
NFIC-209ENST00000589969 CAMSAP2Q08AD1 1489 aa32.67■■■□□ 2.82
NFIC-209ENST00000589969 CCDC141Q6ZP82 1450 aa32.67■■■□□ 2.82
NFIC-209ENST00000589969 MAP3K1Q13233 1512 aa32.67■■■□□ 2.82
NFIC-209ENST00000589969 MROH2AA6NES4 1674 aa32.67■■■□□ 2.82
NFIC-209ENST00000589969 GGT6Q6P531 493 aa32.66■■■□□ 2.82
NFIC-209ENST00000589969 DHX29Q7Z478 1369 aaKnown RBP32.64■■■□□ 2.82
NFIC-209ENST00000589969 TSPY4P0CV99 314 aa32.59■■■□□ 2.81
NFIC-209ENST00000589969 TSPY10P0CW01 314 aa32.59■■■□□ 2.81
NFIC-209ENST00000589969 KANK4Q5T7N3 995 aaPredicted RBP32.57■■■□□ 2.8
NFIC-209ENST00000589969 ARHGEF5Q12774 1597 aa32.57■■■□□ 2.8
NFIC-209ENST00000589969 CLTCQ00610 1675 aaKnown RBP32.55■■■□□ 2.8
NFIC-209ENST00000589969 STRCQ7RTU9 1775 aa32.55■■■□□ 2.8
NFIC-209ENST00000589969 CERKQ8TCT0 537 aa32.54■■■□□ 2.8
NFIC-209ENST00000589969 MIA2Q96PC5 1412 aa32.51■■■□□ 2.8
NFIC-209ENST00000589969 KIF3BO15066 747 aa32.51■■■□□ 2.79
NFIC-209ENST00000589969 APLP2Q06481 763 aa32.51■■■□□ 2.79
NFIC-209ENST00000589969 PTPRTO14522 1441 aa32.51■■■□□ 2.79
NFIC-209ENST00000589969 PTPRKQ15262 1439 aa32.51■■■□□ 2.79
NFIC-209ENST00000589969 MYOM3Q5VTT5 1437 aa32.49■■■□□ 2.79
NFIC-209ENST00000589969 NCOA1Q15788 1441 aa32.47■■■□□ 2.79
NFIC-209ENST00000589969 FAM135AQ9P2D6 1515 aa32.46■■■□□ 2.79
NFIC-209ENST00000589969 WASHC2CQ9Y4E1 1318 aa32.4■■■□□ 2.78
NFIC-209ENST00000589969 MAST1Q9Y2H9 1570 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms