RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 SCAPERQ9BY12 1400 aa31.24■■■□□ 2.59
PTBP1-215ENST00000589883 CLIP1P30622 1438 aa31.23■■■□□ 2.59
PTBP1-215ENST00000589883 MYO5CQ9NQX4 1742 aa31.22■■■□□ 2.59
PTBP1-215ENST00000589883 KIF14Q15058 1648 aa31.2■■■□□ 2.59
PTBP1-215ENST00000589883 TROQ12816 1431 aaPredicted RBP31.2■■■□□ 2.59
PTBP1-215ENST00000589883 YEATS2Q9ULM3 1422 aa31.16■■■□□ 2.58
PTBP1-215ENST00000589883 RIMS1Q86UR5 1692 aaKnown RBP31.15■■■□□ 2.58
PTBP1-215ENST00000589883 PCF11O94913 1555 aaKnown RBP31.1■■■□□ 2.57
PTBP1-215ENST00000589883 ARHGAP5Q13017 1502 aa31.1■■■□□ 2.57
PTBP1-215ENST00000589883 CCDC18Q5T9S5 1454 aa31.09■■■□□ 2.57
PTBP1-215ENST00000589883 ATP10AO60312 1499 aa31.08■■■□□ 2.57
PTBP1-215ENST00000589883 ZNF518AQ6AHZ1 1483 aa31.08■■■□□ 2.57
PTBP1-215ENST00000589883 CASKIN1Q8WXD9 1431 aa31.07■■■□□ 2.57
PTBP1-215ENST00000589883 MLECQ14165 292 aa31.06■■■□□ 2.56
PTBP1-215ENST00000589883 C9orf84Q5VXU9 1444 aa31.06■■■□□ 2.56
PTBP1-215ENST00000589883 LMTK3Q96Q04 1460 aa31.04■■■□□ 2.56
PTBP1-215ENST00000589883 CEP162Q5TB80 1403 aa31.04■■■□□ 2.56
PTBP1-215ENST00000589883 LRRIQ1Q96JM4 1722 aa31.04■■■□□ 2.56
PTBP1-215ENST00000589883 PLPPR3Q6T4P5 718 aa31.01■■■□□ 2.55
PTBP1-215ENST00000589883 MYT1LQ9UL68 1186 aa31.01■■■□□ 2.55
PTBP1-215ENST00000589883 SIGLEC1Q9BZZ2 1709 aa31.01■■■□□ 2.55
PTBP1-215ENST00000589883 FER1L4A9Z1Z3 1794 aa31■■■□□ 2.55
PTBP1-215ENST00000589883 AFAP1Q8N556 730 aa30.98■■■□□ 2.55
PTBP1-215ENST00000589883 KDM5CP41229 1560 aa30.97■■■□□ 2.55
PTBP1-215ENST00000589883 FYCO1Q9BQS8 1478 aa30.95■■■□□ 2.55
PTBP1-215ENST00000589883 CDC42BPBQ9Y5S2 1711 aa30.95■■■□□ 2.54
PTBP1-215ENST00000589883 ARHGEF12Q9NZN5 1544 aa30.94■■■□□ 2.54
PTBP1-215ENST00000589883 PREX2Q70Z35 1606 aa30.93■■■□□ 2.54
PTBP1-215ENST00000589883 FBXO41Q8TF61 875 aa30.91■■■□□ 2.54
PTBP1-215ENST00000589883 MLH3Q9UHC1 1453 aa30.89■■■□□ 2.54
PTBP1-215ENST00000589883 HSPA2P54652 639 aa30.87■■■□□ 2.53
PTBP1-215ENST00000589883 ABCC1P33527 1531 aa30.87■■■□□ 2.53
PTBP1-215ENST00000589883 REREQ9P2R6 1566 aa30.86■■■□□ 2.53
PTBP1-215ENST00000589883 DIP2CQ9Y2E4 1556 aa30.84■■■□□ 2.53
PTBP1-215ENST00000589883 TRAPPC8Q9Y2L5 1435 aa30.81■■■□□ 2.52
PTBP1-215ENST00000589883 CDC42BPAQ5VT25 1732 aa30.81■■■□□ 2.52
PTBP1-215ENST00000589883 ITSN2Q9NZM3 1697 aa30.81■■■□□ 2.52
PTBP1-215ENST00000589883 ESF1Q9H501 851 aaKnown RBP30.79■■■□□ 2.52
PTBP1-215ENST00000589883 ABCA6Q8N139 1617 aa30.78■■■□□ 2.52
PTBP1-215ENST00000589883 ZNF777Q9ULD5 760 aaPredicted RBP30.77■■■□□ 2.52
PTBP1-215ENST00000589883 AGLP35573 1532 aa30.77■■■□□ 2.52
PTBP1-215ENST00000589883 PREX1Q8TCU6 1659 aa30.76■■■□□ 2.51
PTBP1-215ENST00000589883 CEBPAP49715 358 aaPredicted RBP30.75■■■□□ 2.51
PTBP1-215ENST00000589883 SETD1BQ9UPS6 1966 aaKnown RBP30.75■■■□□ 2.51
PTBP1-215ENST00000589883 GPATCH8Q9UKJ3 1502 aaKnown RBP30.73■■■□□ 2.51
PTBP1-215ENST00000589883 MTUS2Q5JR59 1369 aa30.7■■■□□ 2.51
PTBP1-215ENST00000589883 KIDINS220Q9ULH0 1771 aa30.7■■■□□ 2.51
PTBP1-215ENST00000589883 CFDP1Q9UEE9 299 aaPredicted RBP30.7■■■□□ 2.51
PTBP1-215ENST00000589883 PLEKHH2Q8IVE3 1493 aa30.7■■■□□ 2.5
PTBP1-215ENST00000589883 UHRF1BP1Q6BDS2 1440 aa30.69■■■□□ 2.5
PTBP1-215ENST00000589883 CCNB3Q8WWL7 1395 aa30.68■■■□□ 2.5
PTBP1-215ENST00000589883 SPAG9O60271 1321 aaKnown RBP30.68■■■□□ 2.5
PTBP1-215ENST00000589883 SAMD9LQ8IVG5 1584 aa30.67■■■□□ 2.5
PTBP1-215ENST00000589883 CNTLNQ9NXG0 1405 aa30.66■■■□□ 2.5
PTBP1-215ENST00000589883 KIAA1107Q9UPP5 1409 aa30.66■■■□□ 2.5
PTBP1-215ENST00000589883 DMRT2Q9Y5R5 561 aa30.66■■■□□ 2.5
PTBP1-215ENST00000589883 SYCP2Q9BX26 1530 aa30.65■■■□□ 2.5
PTBP1-215ENST00000589883 HNRNPMP52272 730 aaKnown RBP eCLIP30.64■■■□□ 2.54e-7■■■□□ 15
PTBP1-215ENST00000589883 VPS8Q8N3P4 1428 aa30.62■■■□□ 2.49
PTBP1-215ENST00000589883 C3P01024 1663 aa30.61■■■□□ 2.49
PTBP1-215ENST00000589883 CERKQ8TCT0 537 aa30.58■■■□□ 2.49
PTBP1-215ENST00000589883 ATP7AQ04656 1500 aa30.56■■■□□ 2.48
PTBP1-215ENST00000589883 EHBP1L1Q8N3D4 1523 aa30.54■■■□□ 2.48
PTBP1-215ENST00000589883 SUPT6HQ7KZ85 1726 aaKnown RBP30.5■■■□□ 2.47
PTBP1-215ENST00000589883 A2MP01023 1474 aa30.5■■■□□ 2.47
PTBP1-215ENST00000589883 INO80Q9ULG1 1556 aaPredicted RBP30.49■■■□□ 2.47
PTBP1-215ENST00000589883 MROH2AA6NES4 1674 aa30.49■■■□□ 2.47
PTBP1-215ENST00000589883 STRCQ7RTU9 1775 aa30.49■■■□□ 2.47
PTBP1-215ENST00000589883 NPATQ14207 1427 aa30.47■■■□□ 2.47
PTBP1-215ENST00000589883 TIAM1Q13009 1591 aa30.47■■■□□ 2.47
PTBP1-215ENST00000589883 ZMYM3Q14202 1370 aa30.46■■■□□ 2.47
PTBP1-215ENST00000589883 PLXNC1O60486 1568 aa30.45■■■□□ 2.46
PTBP1-215ENST00000589883 PPP6R1Q9UPN7 881 aa30.44■■■□□ 2.46
PTBP1-215ENST00000589883 PTPRTO14522 1441 aa30.43■■■□□ 2.46
PTBP1-215ENST00000589883 ADGBQ8N7X0 1667 aa30.42■■■□□ 2.46
PTBP1-215ENST00000589883 ZNF644Q9H582 1327 aaPredicted RBP30.41■■■□□ 2.46
PTBP1-215ENST00000589883 RTEL1-TNFRSF6BF6WH68 1400 aa30.4■■■□□ 2.46
PTBP1-215ENST00000589883 GGT6Q6P531 493 aa30.4■■■□□ 2.46
PTBP1-215ENST00000589883 MBD5Q9P267 1494 aa30.38■■■□□ 2.45
PTBP1-215ENST00000589883 RSPH4AQ5TD94 716 aa30.38■■■□□ 2.45
PTBP1-215ENST00000589883 CLTCQ00610 1675 aaKnown RBP30.36■■■□□ 2.45
PTBP1-215ENST00000589883 NCOA1Q15788 1441 aa30.35■■■□□ 2.45
PTBP1-215ENST00000589883 NCOA2Q15596 1464 aa30.33■■■□□ 2.45
PTBP1-215ENST00000589883 APLP2Q06481 763 aa30.31■■■□□ 2.44
PTBP1-215ENST00000589883 CCDC141Q6ZP82 1450 aa30.31■■■□□ 2.44
PTBP1-215ENST00000589883 DHX29Q7Z478 1369 aaKnown RBP30.3■■■□□ 2.44
PTBP1-215ENST00000589883 CAMSAP1Q5T5Y3 1602 aa30.29■■■□□ 2.44
PTBP1-215ENST00000589883 PTPRKQ15262 1439 aa30.28■■■□□ 2.44
PTBP1-215ENST00000589883 CAMSAP2Q08AD1 1489 aa30.26■■■□□ 2.44
PTBP1-215ENST00000589883 MAP3K1Q13233 1512 aa30.24■■■□□ 2.43
PTBP1-215ENST00000589883 MYO3AQ8NEV4 1616 aa30.23■■■□□ 2.43
PTBP1-215ENST00000589883 TSPY4P0CV99 314 aa30.23■■■□□ 2.43
PTBP1-215ENST00000589883 TSPY10P0CW01 314 aa30.23■■■□□ 2.43
PTBP1-215ENST00000589883 KIF3BO15066 747 aa30.22■■■□□ 2.43
PTBP1-215ENST00000589883 PKD2Q13563 968 aa30.22■■■□□ 2.43
PTBP1-215ENST00000589883 KANK4Q5T7N3 995 aaPredicted RBP30.22■■■□□ 2.43
PTBP1-215ENST00000589883 ZNF142P52746 1687 aaPredicted RBP30.22■■■□□ 2.43
PTBP1-215ENST00000589883 PLA2R1Q13018 1463 aa30.21■■■□□ 2.43
PTBP1-215ENST00000589883 CEP170BQ9Y4F5 1589 aaPredicted RBP30.2■■■□□ 2.43
PTBP1-215ENST00000589883 FAM135AQ9P2D6 1515 aa30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms