RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 KCNH8Q96L42 1107 aa23.35■■□□□ 1.33
RFX1-206ENST00000589760 ATP1B4Q9UN42 357 aaPredicted RBP23.32■■□□□ 1.32
RFX1-206ENST00000589760 ABCB7O75027 752 aa23.31■■□□□ 1.32
RFX1-206ENST00000589760 CDK13Q14004 1512 aaKnown RBP23.3■■□□□ 1.32
RFX1-206ENST00000589760 LOC105371045A0A1W2PR82 267 aa23.3■■□□□ 1.32
RFX1-206ENST00000589760 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
RFX1-206ENST00000589760 ABCA9Q8IUA7 1624 aa23.29■■□□□ 1.32
RFX1-206ENST00000589760 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
RFX1-206ENST00000589760 MKRN4PQ13434 485 aaPredicted RBP23.28■■□□□ 1.32
RFX1-206ENST00000589760 KDM6BO15054 1643 aa23.28■■□□□ 1.32
RFX1-206ENST00000589760 CEP162Q5TB80 1403 aa23.27■■□□□ 1.32
RFX1-206ENST00000589760 TEX14Q8IWB6 1497 aa23.27■■□□□ 1.32
RFX1-206ENST00000589760 CD109Q6YHK3 1445 aa23.25■■□□□ 1.31
RFX1-206ENST00000589760 CASKIN1Q8WXD9 1431 aa23.25■■□□□ 1.31
RFX1-206ENST00000589760 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
RFX1-206ENST00000589760 FYCO1Q9BQS8 1478 aa23.22■■□□□ 1.31
RFX1-206ENST00000589760 ZBTB12Q9Y330 459 aaPredicted RBP23.21■■□□□ 1.31
RFX1-206ENST00000589760 CCDC18Q5T9S5 1454 aa23.2■■□□□ 1.3
RFX1-206ENST00000589760 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
RFX1-206ENST00000589760 DSG3P32926 999 aa23.18■■□□□ 1.3
RFX1-206ENST00000589760 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.16■■□□□ 1.3
RFX1-206ENST00000589760 CACNB1Q02641 598 aaPredicted RBP23.15■■□□□ 1.3
RFX1-206ENST00000589760 TTC37Q6PGP7 1564 aa23.13■■□□□ 1.29
RFX1-206ENST00000589760 KIF14Q15058 1648 aa23.12■■□□□ 1.29
RFX1-206ENST00000589760 MYO5CQ9NQX4 1742 aa23.12■■□□□ 1.29
RFX1-206ENST00000589760 TROQ12816 1431 aaPredicted RBP23.1■■□□□ 1.29
RFX1-206ENST00000589760 SPDYE4A6NLX3 237 aa23.08■■□□□ 1.29
RFX1-206ENST00000589760 CFAP74Q9C0B2 1584 aa23.08■■□□□ 1.29
RFX1-206ENST00000589760 COL17A1Q9UMD9 1497 aaPredicted RBP23.07■■□□□ 1.28
RFX1-206ENST00000589760 NEO1Q92859 1461 aa23.05■■□□□ 1.28
RFX1-206ENST00000589760 PHLDB1Q86UU1 1377 aa23.04■■□□□ 1.28
RFX1-206ENST00000589760 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
RFX1-206ENST00000589760 VPS8Q8N3P4 1428 aa23.01■■□□□ 1.27
RFX1-206ENST00000589760 CDC42BPBQ9Y5S2 1711 aa23.01■■□□□ 1.27
RFX1-206ENST00000589760 FANCAO15360 1455 aa22.99■■□□□ 1.27
RFX1-206ENST00000589760 CDC42BPAQ5VT25 1732 aa22.99■■□□□ 1.27
RFX1-206ENST00000589760 PLCH2O75038 1416 aa22.99■■□□□ 1.27
RFX1-206ENST00000589760 PREX2Q70Z35 1606 aa22.96■■□□□ 1.27
RFX1-206ENST00000589760 AKNAQ7Z591 1439 aa22.95■■□□□ 1.26
RFX1-206ENST00000589760 RICTORQ6R327 1708 aa22.94■■□□□ 1.26
RFX1-206ENST00000589760 MTUS2Q5JR59 1369 aa22.93■■□□□ 1.26
RFX1-206ENST00000589760 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
RFX1-206ENST00000589760 EHBP1L1Q8N3D4 1523 aa22.92■■□□□ 1.26
RFX1-206ENST00000589760 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
RFX1-206ENST00000589760 FRMPD1Q5SYB0 1578 aa22.89■■□□□ 1.26
RFX1-206ENST00000589760 EFCAB2Q5VUJ9 269 aa22.89■■□□□ 1.25
RFX1-206ENST00000589760 SUPT6HQ7KZ85 1726 aaKnown RBP22.88■■□□□ 1.25
RFX1-206ENST00000589760 DENND4BO75064 1496 aaPredicted RBP22.88■■□□□ 1.25
RFX1-206ENST00000589760 ADGRL1O94910 1474 aa22.87■■□□□ 1.25
RFX1-206ENST00000589760 RAPGEF3O95398 923 aa22.86■■□□□ 1.25
RFX1-206ENST00000589760 ITSN2Q9NZM3 1697 aa22.86■■□□□ 1.25
RFX1-206ENST00000589760 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
RFX1-206ENST00000589760 SCAPERQ9BY12 1400 aa22.82■■□□□ 1.24
RFX1-206ENST00000589760 GPATCH8Q9UKJ3 1502 aaKnown RBP22.82■■□□□ 1.24
RFX1-206ENST00000589760 CCNB3Q8WWL7 1395 aa22.8■■□□□ 1.24
RFX1-206ENST00000589760 ZMYM4Q5VZL5 1548 aa22.79■■□□□ 1.24
RFX1-206ENST00000589760 LRRC9Q6ZRR7 1453 aa22.79■■□□□ 1.24
RFX1-206ENST00000589760 ABCC1P33527 1531 aa22.77■■□□□ 1.24
RFX1-206ENST00000589760 POGZQ7Z3K3 1410 aa22.77■■□□□ 1.24
RFX1-206ENST00000589760 SAMD9LQ8IVG5 1584 aa22.76■■□□□ 1.23
RFX1-206ENST00000589760 PROM2Q8N271 834 aa22.76■■□□□ 1.23
RFX1-206ENST00000589760 NCOA2Q15596 1464 aa22.74■■□□□ 1.23
RFX1-206ENST00000589760 ZNF518AQ6AHZ1 1483 aa22.73■■□□□ 1.23
RFX1-206ENST00000589760 ARHGEF40Q8TER5 1519 aa22.73■■□□□ 1.23
RFX1-206ENST00000589760 CFDP1Q9UEE9 299 aaPredicted RBP22.73■■□□□ 1.23
RFX1-206ENST00000589760 ZNF777Q9ULD5 760 aaPredicted RBP22.73■■□□□ 1.23
RFX1-206ENST00000589760 MAGI2Q86UL8 1455 aa22.73■■□□□ 1.23
RFX1-206ENST00000589760 KDM5CP41229 1560 aa22.72■■□□□ 1.23
RFX1-206ENST00000589760 ZFYVE16Q7Z3T8 1539 aa22.71■■□□□ 1.23
RFX1-206ENST00000589760 KANK4Q5T7N3 995 aaPredicted RBP22.7■■□□□ 1.22
RFX1-206ENST00000589760 ARHGEF12Q9NZN5 1544 aa22.7■■□□□ 1.22
RFX1-206ENST00000589760 HECW2Q9P2P5 1572 aa22.69■■□□□ 1.22
RFX1-206ENST00000589760 FBXO3Q9UK99 471 aa22.69■■□□□ 1.22
RFX1-206ENST00000589760 PLEKHH2Q8IVE3 1493 aa22.68■■□□□ 1.22
RFX1-206ENST00000589760 SYCP2Q9BX26 1530 aa22.67■■□□□ 1.22
RFX1-206ENST00000589760 KDM4FA0A1W2PPD8 638 aa22.66■■□□□ 1.22
RFX1-206ENST00000589760 AFAP1Q8N556 730 aa22.66■■□□□ 1.22
RFX1-206ENST00000589760 YEATS2Q9ULM3 1422 aa22.65■■□□□ 1.22
RFX1-206ENST00000589760 TRAPPC8Q9Y2L5 1435 aa22.65■■□□□ 1.22
RFX1-206ENST00000589760 KIAA1107Q9UPP5 1409 aa22.64■■□□□ 1.21
RFX1-206ENST00000589760 KIDINS220Q9ULH0 1771 aa22.63■■□□□ 1.21
RFX1-206ENST00000589760 MLH3Q9UHC1 1453 aa22.62■■□□□ 1.21
RFX1-206ENST00000589760 MYT1LQ9UL68 1186 aa22.62■■□□□ 1.21
RFX1-206ENST00000589760 BCORL1Q5H9F3 1711 aa22.62■■□□□ 1.21
RFX1-206ENST00000589760 HNRNPMP52272 730 aaKnown RBP eCLIP22.61■■□□□ 1.21
RFX1-206ENST00000589760 SIGLEC1Q9BZZ2 1709 aa22.61■■□□□ 1.21
RFX1-206ENST00000589760 SPDYE2BA6NHP3 402 aa22.6■■□□□ 1.21
RFX1-206ENST00000589760 SPDYE6P0CI01 402 aa22.6■■□□□ 1.21
RFX1-206ENST00000589760 SPDYE2Q495Y8 402 aa22.6■■□□□ 1.21
RFX1-206ENST00000589760 ABCA6Q8N139 1617 aa22.59■■□□□ 1.21
RFX1-206ENST00000589760 ATP10AO60312 1499 aa22.59■■□□□ 1.21
RFX1-206ENST00000589760 CAMSAP2Q08AD1 1489 aa22.59■■□□□ 1.21
RFX1-206ENST00000589760 DIP2CQ9Y2E4 1556 aa22.59■■□□□ 1.21
RFX1-206ENST00000589760 ZNF692Q9BU19 519 aaPredicted RBP22.58■■□□□ 1.21
RFX1-206ENST00000589760 ADAMTSL3P82987 1691 aa22.58■■□□□ 1.2
RFX1-206ENST00000589760 ARID4BQ4LE39 1312 aaPredicted RBP22.57■■□□□ 1.2
RFX1-206ENST00000589760 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
RFX1-206ENST00000589760 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
RFX1-206ENST00000589760 C9orf84Q5VXU9 1444 aa22.57■■□□□ 1.2
RFX1-206ENST00000589760 INO80Q9ULG1 1556 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms