RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
TMED1-205ENST00000589638 MYO5CQ9NQX4 1742 aa26.85■■□□□ 1.89
TMED1-205ENST00000589638 TCOF1Q13428 1488 aaKnown RBP26.85■■□□□ 1.89
TMED1-205ENST00000589638 DIP2BQ9P265 1576 aa26.84■■□□□ 1.89
TMED1-205ENST00000589638 CD109Q6YHK3 1445 aa26.84■■□□□ 1.89
TMED1-205ENST00000589638 ITGAEP38570 1179 aa26.84■■□□□ 1.89
TMED1-205ENST00000589638 GLI2P10070 1586 aa26.82■■□□□ 1.88
TMED1-205ENST00000589638 CDC42BPBQ9Y5S2 1711 aa26.82■■□□□ 1.88
TMED1-205ENST00000589638 CAMSAP2Q08AD1 1489 aa26.81■■□□□ 1.88
TMED1-205ENST00000589638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.81■■□□□ 1.88
TMED1-205ENST00000589638 EFCAB2Q5VUJ9 269 aa26.8■■□□□ 1.88
TMED1-205ENST00000589638 ARAP3Q8WWN8 1544 aa26.76■■□□□ 1.87
TMED1-205ENST00000589638 SAMD9LQ8IVG5 1584 aa26.75■■□□□ 1.87
TMED1-205ENST00000589638 FANCAO15360 1455 aa26.74■■□□□ 1.87
TMED1-205ENST00000589638 MAP3K4Q9Y6R4 1608 aa26.73■■□□□ 1.87
TMED1-205ENST00000589638 HNRNPMP52272 730 aaKnown RBP eCLIP26.71■■□□□ 1.87
TMED1-205ENST00000589638 PLEKHH2Q8IVE3 1493 aa26.68■■□□□ 1.86
TMED1-205ENST00000589638 SYCP2Q9BX26 1530 aa26.67■■□□□ 1.86
TMED1-205ENST00000589638 TRHP20396 242 aaPredicted RBP26.67■■□□□ 1.86
TMED1-205ENST00000589638 KIF13AQ9H1H9 1805 aa26.67■■□□□ 1.86
TMED1-205ENST00000589638 ABCC5O15440 1437 aa26.66■■□□□ 1.86
TMED1-205ENST00000589638 DAPK1P53355 1430 aa26.66■■□□□ 1.86
TMED1-205ENST00000589638 PTPRKQ15262 1439 aa26.66■■□□□ 1.86
TMED1-205ENST00000589638 AKNAQ7Z591 1439 aa26.66■■□□□ 1.86
TMED1-205ENST00000589638 ABCC1P33527 1531 aa26.65■■□□□ 1.86
TMED1-205ENST00000589638 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
TMED1-205ENST00000589638 MBD5Q9P267 1494 aa26.64■■□□□ 1.86
TMED1-205ENST00000589638 DNMT1P26358 1616 aaKnown RBP26.64■■□□□ 1.85
TMED1-205ENST00000589638 ARHGEF12Q9NZN5 1544 aa26.64■■□□□ 1.85
TMED1-205ENST00000589638 ADGRL1O94910 1474 aa26.63■■□□□ 1.85
TMED1-205ENST00000589638 CHIC2Q9UKJ5 165 aa26.63■■□□□ 1.85
TMED1-205ENST00000589638 CFAP74Q9C0B2 1584 aa26.63■■□□□ 1.85
TMED1-205ENST00000589638 NEO1Q92859 1461 aa26.62■■□□□ 1.85
TMED1-205ENST00000589638 SCAPERQ9BY12 1400 aa26.6■■□□□ 1.85
TMED1-205ENST00000589638 CCDC141Q6ZP82 1450 aa26.6■■□□□ 1.85
TMED1-205ENST00000589638 TSPOAP1O95153 1857 aa26.59■■□□□ 1.85
TMED1-205ENST00000589638 ARHGEF5Q12774 1597 aa26.59■■□□□ 1.85
TMED1-205ENST00000589638 TRAPPC8Q9Y2L5 1435 aa26.58■■□□□ 1.85
TMED1-205ENST00000589638 TEX14Q8IWB6 1497 aa26.58■■□□□ 1.85
TMED1-205ENST00000589638 RSPH4AQ5TD94 716 aa26.57■■□□□ 1.84
TMED1-205ENST00000589638 PPRC1Q5VV67 1664 aaKnown RBP26.57■■□□□ 1.84
TMED1-205ENST00000589638 TSPY4P0CV99 314 aa26.56■■□□□ 1.84
TMED1-205ENST00000589638 TSPY10P0CW01 314 aa26.56■■□□□ 1.84
TMED1-205ENST00000589638 C9orf84Q5VXU9 1444 aa26.54■■□□□ 1.84
TMED1-205ENST00000589638 AFAP1Q8N556 730 aa26.53■■□□□ 1.84
TMED1-205ENST00000589638 RRP7BPQ9NSQ0 103 aa26.52■■□□□ 1.84
TMED1-205ENST00000589638 SHANK2Q9UPX8 1470 aa26.52■■□□□ 1.84
TMED1-205ENST00000589638 CROCC2H7BZ55 1655 aa26.51■■□□□ 1.83
TMED1-205ENST00000589638 DENND4BO75064 1496 aaPredicted RBP26.49■■□□□ 1.83
TMED1-205ENST00000589638 POGZQ7Z3K3 1410 aa26.48■■□□□ 1.83
TMED1-205ENST00000589638 ROCK1Q13464 1354 aa26.46■■□□□ 1.83
TMED1-205ENST00000589638 SPAG9O60271 1321 aaKnown RBP26.46■■□□□ 1.83
TMED1-205ENST00000589638 RAPGEF3O95398 923 aa26.46■■□□□ 1.83
TMED1-205ENST00000589638 ANKRD30AQ9BXX3 1397 aa26.46■■□□□ 1.83
TMED1-205ENST00000589638 MYT1LQ9UL68 1186 aa26.45■■□□□ 1.82
TMED1-205ENST00000589638 ADGRL2O95490 1459 aa26.44■■□□□ 1.82
TMED1-205ENST00000589638 ZNF518AQ6AHZ1 1483 aa26.44■■□□□ 1.82
TMED1-205ENST00000589638 SETD5Q9C0A6 1442 aa26.44■■□□□ 1.82
TMED1-205ENST00000589638 MAST1Q9Y2H9 1570 aa26.43■■□□□ 1.82
TMED1-205ENST00000589638 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
TMED1-205ENST00000589638 NAIPQ13075 1403 aa26.42■■□□□ 1.82
TMED1-205ENST00000589638 NCOA1Q15788 1441 aa26.42■■□□□ 1.82
TMED1-205ENST00000589638 ADGBQ8N7X0 1667 aa26.42■■□□□ 1.82
TMED1-205ENST00000589638 RAB3GAP2Q9H2M9 1393 aa26.39■■□□□ 1.82
TMED1-205ENST00000589638 KIF15Q9NS87 1388 aa26.38■■□□□ 1.81
TMED1-205ENST00000589638 ZFYVE16Q7Z3T8 1539 aa26.38■■□□□ 1.81
TMED1-205ENST00000589638 RTEL1-TNFRSF6BF6WH68 1400 aa26.37■■□□□ 1.81
TMED1-205ENST00000589638 KDM5CP41229 1560 aa26.37■■□□□ 1.81
TMED1-205ENST00000589638 ATP7AQ04656 1500 aa26.35■■□□□ 1.81
TMED1-205ENST00000589638 COL17A1Q9UMD9 1497 aaPredicted RBP26.35■■□□□ 1.81
TMED1-205ENST00000589638 FRMPD1Q5SYB0 1578 aa26.34■■□□□ 1.81
TMED1-205ENST00000589638 INO80Q9ULG1 1556 aaPredicted RBP26.34■■□□□ 1.81
TMED1-205ENST00000589638 RICTORQ6R327 1708 aa26.34■■□□□ 1.81
TMED1-205ENST00000589638 GCC2Q8IWJ2 1684 aa26.33■■□□□ 1.81
TMED1-205ENST00000589638 PLXNC1O60486 1568 aa26.32■■□□□ 1.8
TMED1-205ENST00000589638 MLH3Q9UHC1 1453 aa26.31■■□□□ 1.8
TMED1-205ENST00000589638 HECW2Q9P2P5 1572 aa26.31■■□□□ 1.8
TMED1-205ENST00000589638 ANKRD50Q9ULJ7 1429 aa26.29■■□□□ 1.8
TMED1-205ENST00000589638 KDM6BO15054 1643 aa26.28■■□□□ 1.8
TMED1-205ENST00000589638 KIDINS220Q9ULH0 1771 aa26.27■■□□□ 1.8
TMED1-205ENST00000589638 ZMYM4Q5VZL5 1548 aa26.25■■□□□ 1.79
TMED1-205ENST00000589638 DUOX2Q9NRD8 1548 aa26.25■■□□□ 1.79
TMED1-205ENST00000589638 YEATS2Q9ULM3 1422 aa26.23■■□□□ 1.79
TMED1-205ENST00000589638 HRCP23327 699 aa26.23■■□□□ 1.79
TMED1-205ENST00000589638 TRIM52Q96A61 297 aa26.21■■□□□ 1.79
TMED1-205ENST00000589638 ABCA6Q8N139 1617 aa26.21■■□□□ 1.79
TMED1-205ENST00000589638 MAGI2Q86UL8 1455 aa26.19■■□□□ 1.78
TMED1-205ENST00000589638 ERBINQ96RT1 1412 aa26.19■■□□□ 1.78
TMED1-205ENST00000589638 DHX29Q7Z478 1369 aaKnown RBP26.19■■□□□ 1.78
TMED1-205ENST00000589638 A2MP01023 1474 aa26.18■■□□□ 1.78
TMED1-205ENST00000589638 DIP2CQ9Y2E4 1556 aa26.18■■□□□ 1.78
TMED1-205ENST00000589638 CCER1Q8TC90 406 aaPredicted RBP26.14■■□□□ 1.78
TMED1-205ENST00000589638 DHX57Q6P158 1386 aaKnown RBP26.11■■□□□ 1.77
TMED1-205ENST00000589638 KIF3BO15066 747 aa26.11■■□□□ 1.77
TMED1-205ENST00000589638 ATP10AO60312 1499 aa26.11■■□□□ 1.77
TMED1-205ENST00000589638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.1■■□□□ 1.77
TMED1-205ENST00000589638 ARHGEF40Q8TER5 1519 aa26.09■■□□□ 1.77
TMED1-205ENST00000589638 ACIN1Q9UKV3 1341 aaKnown RBP26.09■■□□□ 1.77
TMED1-205ENST00000589638 NUP155O75694 1391 aa26.07■■□□□ 1.76
TMED1-205ENST00000589638 EIF2AK4Q9P2K8 1649 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms