RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
CLPTM1-211ENST00000589347 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
CLPTM1-211ENST00000589347 ARID4BQ4LE39 1312 aaPredicted RBP17.21■□□□□ 0.35
CLPTM1-211ENST00000589347 FANCAO15360 1455 aa17.2■□□□□ 0.34
CLPTM1-211ENST00000589347 ATP1B4Q9UN42 357 aaPredicted RBP17.19■□□□□ 0.34
CLPTM1-211ENST00000589347 CLIP1P30622 1438 aa17.19■□□□□ 0.34
CLPTM1-211ENST00000589347 FYCO1Q9BQS8 1478 aa17.18■□□□□ 0.34
CLPTM1-211ENST00000589347 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
CLPTM1-211ENST00000589347 SPATA31D1Q6ZQQ2 1576 aa17.18■□□□□ 0.34
CLPTM1-211ENST00000589347 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
CLPTM1-211ENST00000589347 POGZQ7Z3K3 1410 aa17.17■□□□□ 0.34
CLPTM1-211ENST00000589347 CASKIN1Q8WXD9 1431 aa17.17■□□□□ 0.34
CLPTM1-211ENST00000589347 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
CLPTM1-211ENST00000589347 AKNAQ7Z591 1439 aa17.15■□□□□ 0.34
CLPTM1-211ENST00000589347 ZFYVE16Q7Z3T8 1539 aa17.14■□□□□ 0.33
CLPTM1-211ENST00000589347 PREX1Q8TCU6 1659 aa17.13■□□□□ 0.33
CLPTM1-211ENST00000589347 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
CLPTM1-211ENST00000589347 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
CLPTM1-211ENST00000589347 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
CLPTM1-211ENST00000589347 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
CLPTM1-211ENST00000589347 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
CLPTM1-211ENST00000589347 STRCQ7RTU9 1775 aa17.1■□□□□ 0.33
CLPTM1-211ENST00000589347 CDC42BPBQ9Y5S2 1711 aa17.08■□□□□ 0.32
CLPTM1-211ENST00000589347 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
CLPTM1-211ENST00000589347 PLCH2O75038 1416 aa17.07■□□□□ 0.32
CLPTM1-211ENST00000589347 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
CLPTM1-211ENST00000589347 CEP162Q5TB80 1403 aa17.06■□□□□ 0.32
CLPTM1-211ENST00000589347 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.32
CLPTM1-211ENST00000589347 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
CLPTM1-211ENST00000589347 IQSEC2Q5JU85 1478 aa17.01■□□□□ 0.31
CLPTM1-211ENST00000589347 LTBP4Q8N2S1 1624 aa17■□□□□ 0.31
CLPTM1-211ENST00000589347 PTPRTO14522 1441 aa17■□□□□ 0.31
CLPTM1-211ENST00000589347 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
CLPTM1-211ENST00000589347 EHBP1L1Q8N3D4 1523 aa17■□□□□ 0.31
CLPTM1-211ENST00000589347 C9orf84Q5VXU9 1444 aa16.99■□□□□ 0.31
CLPTM1-211ENST00000589347 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
CLPTM1-211ENST00000589347 UHRF1BP1Q6BDS2 1440 aa16.98■□□□□ 0.31
CLPTM1-211ENST00000589347 SCAPERQ9BY12 1400 aa16.98■□□□□ 0.31
CLPTM1-211ENST00000589347 ATP10AO60312 1499 aa16.98■□□□□ 0.31
CLPTM1-211ENST00000589347 ZNF518AQ6AHZ1 1483 aa16.98■□□□□ 0.31
CLPTM1-211ENST00000589347 ABCC1P33527 1531 aa16.97■□□□□ 0.31
CLPTM1-211ENST00000589347 KDM5CP41229 1560 aa16.97■□□□□ 0.31
CLPTM1-211ENST00000589347 MLECQ14165 292 aa16.96■□□□□ 0.31
CLPTM1-211ENST00000589347 SETD1BQ9UPS6 1966 aaKnown RBP16.95■□□□□ 0.3
CLPTM1-211ENST00000589347 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
CLPTM1-211ENST00000589347 SUPT6HQ7KZ85 1726 aaKnown RBP16.94■□□□□ 0.3
CLPTM1-211ENST00000589347 REREQ9P2R6 1566 aa16.91■□□□□ 0.3
CLPTM1-211ENST00000589347 CEBPAP49715 358 aaPredicted RBP16.91■□□□□ 0.3
CLPTM1-211ENST00000589347 TIAM1Q13009 1591 aa16.9■□□□□ 0.3
CLPTM1-211ENST00000589347 SAMD9LQ8IVG5 1584 aa16.9■□□□□ 0.3
CLPTM1-211ENST00000589347 VPS8Q8N3P4 1428 aa16.89■□□□□ 0.29
CLPTM1-211ENST00000589347 C3P01024 1663 aa16.89■□□□□ 0.29
CLPTM1-211ENST00000589347 ABCA6Q8N139 1617 aa16.88■□□□□ 0.29
CLPTM1-211ENST00000589347 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
CLPTM1-211ENST00000589347 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
CLPTM1-211ENST00000589347 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
CLPTM1-211ENST00000589347 SYCP2Q9BX26 1530 aa16.87■□□□□ 0.29
CLPTM1-211ENST00000589347 DIP2CQ9Y2E4 1556 aa16.87■□□□□ 0.29
CLPTM1-211ENST00000589347 GPATCH8Q9UKJ3 1502 aaKnown RBP16.86■□□□□ 0.29
CLPTM1-211ENST00000589347 KIDINS220Q9ULH0 1771 aa16.85■□□□□ 0.29
CLPTM1-211ENST00000589347 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
CLPTM1-211ENST00000589347 MLH3Q9UHC1 1453 aa16.84■□□□□ 0.29
CLPTM1-211ENST00000589347 AGLP35573 1532 aa16.82■□□□□ 0.28
CLPTM1-211ENST00000589347 LOC105371045A0A1W2PR82 267 aa16.82■□□□□ 0.28
CLPTM1-211ENST00000589347 TRAPPC8Q9Y2L5 1435 aa16.81■□□□□ 0.28
CLPTM1-211ENST00000589347 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
CLPTM1-211ENST00000589347 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
CLPTM1-211ENST00000589347 KIAA1107Q9UPP5 1409 aa16.79■□□□□ 0.28
CLPTM1-211ENST00000589347 ADGBQ8N7X0 1667 aa16.79■□□□□ 0.28
CLPTM1-211ENST00000589347 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
CLPTM1-211ENST00000589347 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
CLPTM1-211ENST00000589347 ATP7AQ04656 1500 aa16.79■□□□□ 0.28
CLPTM1-211ENST00000589347 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
CLPTM1-211ENST00000589347 AFAP1Q8N556 730 aa16.78■□□□□ 0.28
CLPTM1-211ENST00000589347 CAMSAP1Q5T5Y3 1602 aa16.77■□□□□ 0.27
CLPTM1-211ENST00000589347 LRRC9Q6ZRR7 1453 aa16.76■□□□□ 0.27
CLPTM1-211ENST00000589347 NPATQ14207 1427 aa16.75■□□□□ 0.27
CLPTM1-211ENST00000589347 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
CLPTM1-211ENST00000589347 MROH2AA6NES4 1674 aa16.75■□□□□ 0.27
CLPTM1-211ENST00000589347 MED1Q15648 1581 aaPredicted RBP16.74■□□□□ 0.27
CLPTM1-211ENST00000589347 CAMSAP2Q08AD1 1489 aa16.73■□□□□ 0.27
CLPTM1-211ENST00000589347 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
CLPTM1-211ENST00000589347 PLA2R1Q13018 1463 aa16.72■□□□□ 0.27
CLPTM1-211ENST00000589347 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
CLPTM1-211ENST00000589347 PLXNC1O60486 1568 aa16.71■□□□□ 0.27
CLPTM1-211ENST00000589347 ZNF335Q9H4Z2 1342 aaPredicted RBP16.7■□□□□ 0.26
CLPTM1-211ENST00000589347 ARHGEF5Q12774 1597 aa16.7■□□□□ 0.26
CLPTM1-211ENST00000589347 TCOF1Q13428 1488 aaKnown RBP16.7■□□□□ 0.26
CLPTM1-211ENST00000589347 CCDC141Q6ZP82 1450 aa16.7■□□□□ 0.26
CLPTM1-211ENST00000589347 UBAP1LF5GYI3 381 aa16.69■□□□□ 0.26
CLPTM1-211ENST00000589347 HNRNPMP52272 730 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLPTM1-211ENST00000589347 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
CLPTM1-211ENST00000589347 APLP2Q06481 763 aa16.68■□□□□ 0.26
CLPTM1-211ENST00000589347 A2MP01023 1474 aa16.67■□□□□ 0.26
CLPTM1-211ENST00000589347 MBD5Q9P267 1494 aa16.66■□□□□ 0.26
CLPTM1-211ENST00000589347 CEP170BQ9Y4F5 1589 aaPredicted RBP16.65■□□□□ 0.26
CLPTM1-211ENST00000589347 RTEL1-TNFRSF6BF6WH68 1400 aa16.65■□□□□ 0.26
CLPTM1-211ENST00000589347 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-211ENST00000589347 MYOM3Q5VTT5 1437 aa16.64■□□□□ 0.25
CLPTM1-211ENST00000589347 CROCC2H7BZ55 1655 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms