RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 PLCH2O75038 1416 aa37.61■■■■□ 3.61
RFX1-205ENST00000589239 TCOF1Q13428 1488 aaKnown RBP37.59■■■■□ 3.61
RFX1-205ENST00000589239 ARHGAP5Q13017 1502 aa37.58■■■■□ 3.61
RFX1-205ENST00000589239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.57■■■■□ 3.61
RFX1-205ENST00000589239 DIP2BQ9P265 1576 aa37.56■■■■□ 3.6
RFX1-205ENST00000589239 FAM69CQ0P6D2 419 aa37.55■■■■□ 3.6
RFX1-205ENST00000589239 ITGAEP38570 1179 aa37.54■■■■□ 3.6
RFX1-205ENST00000589239 CAMSAP2Q08AD1 1489 aa37.53■■■■□ 3.6
RFX1-205ENST00000589239 CD109Q6YHK3 1445 aa37.53■■■■□ 3.6
RFX1-205ENST00000589239 GLI2P10070 1586 aa37.52■■■■□ 3.6
RFX1-205ENST00000589239 ARAP3Q8WWN8 1544 aa37.48■■■■□ 3.59
RFX1-205ENST00000589239 EFCAB2Q5VUJ9 269 aa37.48■■■■□ 3.59
RFX1-205ENST00000589239 SAMD9LQ8IVG5 1584 aa37.46■■■■□ 3.59
RFX1-205ENST00000589239 MAP3K4Q9Y6R4 1608 aa37.44■■■■□ 3.58
RFX1-205ENST00000589239 FANCAO15360 1455 aa37.43■■■■□ 3.58
RFX1-205ENST00000589239 KIF13AQ9H1H9 1805 aa37.38■■■■□ 3.57
RFX1-205ENST00000589239 HNRNPMP52272 730 aaKnown RBP eCLIP37.37■■■■□ 3.57
RFX1-205ENST00000589239 PTPRKQ15262 1439 aa37.36■■■■□ 3.57
RFX1-205ENST00000589239 SYCP2Q9BX26 1530 aa37.33■■■■□ 3.57
RFX1-205ENST00000589239 ABCC5O15440 1437 aa37.33■■■■□ 3.57
RFX1-205ENST00000589239 DAPK1P53355 1430 aa37.33■■■■□ 3.57
RFX1-205ENST00000589239 DNMT1P26358 1616 aaKnown RBP37.32■■■■□ 3.57
RFX1-205ENST00000589239 MBD5Q9P267 1494 aa37.32■■■■□ 3.57
RFX1-205ENST00000589239 PLEKHH2Q8IVE3 1493 aa37.32■■■■□ 3.56
RFX1-205ENST00000589239 KIAA1107Q9UPP5 1409 aa37.31■■■■□ 3.56
RFX1-205ENST00000589239 ABCC1P33527 1531 aa37.3■■■■□ 3.56
RFX1-205ENST00000589239 ARHGEF12Q9NZN5 1544 aa37.3■■■■□ 3.56
RFX1-205ENST00000589239 AKNAQ7Z591 1439 aa37.28■■■■□ 3.56
RFX1-205ENST00000589239 CHIC2Q9UKJ5 165 aa37.26■■■■□ 3.56
RFX1-205ENST00000589239 TSPOAP1O95153 1857 aa37.26■■■■□ 3.56
RFX1-205ENST00000589239 ADGRL1O94910 1474 aa37.25■■■■□ 3.55
RFX1-205ENST00000589239 ARHGEF5Q12774 1597 aa37.24■■■■□ 3.55
RFX1-205ENST00000589239 CFAP74Q9C0B2 1584 aa37.24■■■■□ 3.55
RFX1-205ENST00000589239 NEO1Q92859 1461 aa37.22■■■■□ 3.55
RFX1-205ENST00000589239 TRHP20396 242 aaPredicted RBP37.22■■■■□ 3.55
RFX1-205ENST00000589239 PPRC1Q5VV67 1664 aaKnown RBP37.21■■■■□ 3.55
RFX1-205ENST00000589239 CCDC141Q6ZP82 1450 aa37.21■■■■□ 3.55
RFX1-205ENST00000589239 SCAPERQ9BY12 1400 aa37.21■■■■□ 3.55
RFX1-205ENST00000589239 RSPH4AQ5TD94 716 aa37.2■■■■□ 3.55
RFX1-205ENST00000589239 TRAPPC8Q9Y2L5 1435 aa37.19■■■■□ 3.54
RFX1-205ENST00000589239 CROCC2H7BZ55 1655 aa37.17■■■■□ 3.54
RFX1-205ENST00000589239 TSPY4P0CV99 314 aa37.16■■■■□ 3.54
RFX1-205ENST00000589239 TSPY10P0CW01 314 aa37.16■■■■□ 3.54
RFX1-205ENST00000589239 TEX14Q8IWB6 1497 aa37.15■■■■□ 3.54
RFX1-205ENST00000589239 AFAP1Q8N556 730 aa37.13■■■■□ 3.54
RFX1-205ENST00000589239 C9orf84Q5VXU9 1444 aa37.12■■■■□ 3.53
RFX1-205ENST00000589239 SHANK2Q9UPX8 1470 aa37.12■■■■□ 3.53
RFX1-205ENST00000589239 RRP7BPQ9NSQ0 103 aa37.1■■■■□ 3.53
RFX1-205ENST00000589239 HRCP23327 699 aa37.1■■■■□ 3.53
RFX1-205ENST00000589239 ROCK1Q13464 1354 aa37.06■■■■□ 3.52
RFX1-205ENST00000589239 HFM1A2PYH4 1435 aa37.05■■■■□ 3.52
RFX1-205ENST00000589239 POGZQ7Z3K3 1410 aa37.04■■■■□ 3.52
RFX1-205ENST00000589239 NCOA1Q15788 1441 aa37.03■■■■□ 3.52
RFX1-205ENST00000589239 ADGRL2O95490 1459 aa37.03■■■■□ 3.52
RFX1-205ENST00000589239 ZNF518AQ6AHZ1 1483 aa37.02■■■■□ 3.52
RFX1-205ENST00000589239 NAIPQ13075 1403 aa37.02■■■■□ 3.52
RFX1-205ENST00000589239 DENND4BO75064 1496 aaPredicted RBP37.02■■■■□ 3.52
RFX1-205ENST00000589239 SETD5Q9C0A6 1442 aa37.02■■■■□ 3.52
RFX1-205ENST00000589239 RAPGEF3O95398 923 aa37.01■■■■□ 3.52
RFX1-205ENST00000589239 ADGBQ8N7X0 1667 aa37.01■■■■□ 3.52
RFX1-205ENST00000589239 ANKRD30AQ9BXX3 1397 aa37.01■■■■□ 3.52
RFX1-205ENST00000589239 SPAG9O60271 1321 aaKnown RBP37■■■■□ 3.51
RFX1-205ENST00000589239 MAST1Q9Y2H9 1570 aa37■■■■□ 3.51
RFX1-205ENST00000589239 RAB3GAP2Q9H2M9 1393 aa36.96■■■■□ 3.51
RFX1-205ENST00000589239 ZFYVE16Q7Z3T8 1539 aa36.93■■■■□ 3.5
RFX1-205ENST00000589239 KDM5CP41229 1560 aa36.92■■■■□ 3.5
RFX1-205ENST00000589239 GCC2Q8IWJ2 1684 aa36.92■■■■□ 3.5
RFX1-205ENST00000589239 RTEL1-TNFRSF6BF6WH68 1400 aa36.91■■■■□ 3.5
RFX1-205ENST00000589239 KIF15Q9NS87 1388 aa36.91■■■■□ 3.5
RFX1-205ENST00000589239 RICTORQ6R327 1708 aa36.91■■■■□ 3.5
RFX1-205ENST00000589239 MYT1LQ9UL68 1186 aa36.91■■■■□ 3.5
RFX1-205ENST00000589239 INO80Q9ULG1 1556 aaPredicted RBP36.89■■■■□ 3.5
RFX1-205ENST00000589239 COL17A1Q9UMD9 1497 aaPredicted RBP36.89■■■■□ 3.5
RFX1-205ENST00000589239 ATP7AQ04656 1500 aa36.89■■■■□ 3.5
RFX1-205ENST00000589239 FRMPD1Q5SYB0 1578 aa36.87■■■■□ 3.49
RFX1-205ENST00000589239 PLXNC1O60486 1568 aa36.86■■■■□ 3.49
RFX1-205ENST00000589239 KDM6BO15054 1643 aa36.84■■■■□ 3.49
RFX1-205ENST00000589239 MLH3Q9UHC1 1453 aa36.83■■■■□ 3.49
RFX1-205ENST00000589239 KIDINS220Q9ULH0 1771 aa36.82■■■■□ 3.49
RFX1-205ENST00000589239 HECW2Q9P2P5 1572 aa36.82■■■■□ 3.48
RFX1-205ENST00000589239 ANKRD50Q9ULJ7 1429 aa36.81■■■■□ 3.48
RFX1-205ENST00000589239 ZMYM4Q5VZL5 1548 aa36.74■■■■□ 3.47
RFX1-205ENST00000589239 DUOX2Q9NRD8 1548 aa36.74■■■■□ 3.47
RFX1-205ENST00000589239 YEATS2Q9ULM3 1422 aa36.7■■■■□ 3.47
RFX1-205ENST00000589239 ABCA6Q8N139 1617 aa36.68■■■■□ 3.46
RFX1-205ENST00000589239 ERBINQ96RT1 1412 aa36.66■■■■□ 3.46
RFX1-205ENST00000589239 MAGI2Q86UL8 1455 aa36.65■■■■□ 3.46
RFX1-205ENST00000589239 DIP2CQ9Y2E4 1556 aa36.64■■■■□ 3.46
RFX1-205ENST00000589239 DHX29Q7Z478 1369 aaKnown RBP36.64■■■■□ 3.46
RFX1-205ENST00000589239 TRIM52Q96A61 297 aa36.63■■■■□ 3.45
RFX1-205ENST00000589239 A2MP01023 1474 aa36.62■■■■□ 3.45
RFX1-205ENST00000589239 CCER1Q8TC90 406 aaPredicted RBP36.6■■■■□ 3.45
RFX1-205ENST00000589239 DHX57Q6P158 1386 aaKnown RBP36.6■■■■□ 3.45
RFX1-205ENST00000589239 ACIN1Q9UKV3 1341 aaKnown RBP36.52■■■■□ 3.44
RFX1-205ENST00000589239 KIF3BO15066 747 aa36.52■■■■□ 3.44
RFX1-205ENST00000589239 ATP10AO60312 1499 aa36.51■■■■□ 3.43
RFX1-205ENST00000589239 NUP155O75694 1391 aa36.49■■■■□ 3.43
RFX1-205ENST00000589239 ARHGEF40Q8TER5 1519 aa36.49■■■■□ 3.43
RFX1-205ENST00000589239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.48■■■■□ 3.43
RFX1-205ENST00000589239 EIF2AK4Q9P2K8 1649 aaKnown RBP36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms