RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 HECW2Q9P2P5 1572 aa18.54■□□□□ 0.56
RFX1-204ENST00000588885 SCAPERQ9BY12 1400 aa18.51■□□□□ 0.55
RFX1-204ENST00000588885 KIF14Q15058 1648 aa18.51■□□□□ 0.55
RFX1-204ENST00000588885 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
RFX1-204ENST00000588885 RICTORQ6R327 1708 aa18.5■□□□□ 0.55
RFX1-204ENST00000588885 CCDC18Q5T9S5 1454 aa18.5■□□□□ 0.55
RFX1-204ENST00000588885 MYO5CQ9NQX4 1742 aa18.49■□□□□ 0.55
RFX1-204ENST00000588885 FYCO1Q9BQS8 1478 aa18.49■□□□□ 0.55
RFX1-204ENST00000588885 FRMPD1Q5SYB0 1578 aa18.49■□□□□ 0.55
RFX1-204ENST00000588885 LRRIQ1Q96JM4 1722 aa18.48■□□□□ 0.55
RFX1-204ENST00000588885 BCORL1Q5H9F3 1711 aa18.46■□□□□ 0.55
RFX1-204ENST00000588885 ARHGAP5Q13017 1502 aa18.45■□□□□ 0.54
RFX1-204ENST00000588885 ARHGEF40Q8TER5 1519 aa18.45■□□□□ 0.54
RFX1-204ENST00000588885 AFAP1Q8N556 730 aa18.45■□□□□ 0.54
RFX1-204ENST00000588885 MYT1LQ9UL68 1186 aa18.45■□□□□ 0.54
RFX1-204ENST00000588885 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
RFX1-204ENST00000588885 ADAMTSL3P82987 1691 aa18.44■□□□□ 0.54
RFX1-204ENST00000588885 YEATS2Q9ULM3 1422 aa18.43■□□□□ 0.54
RFX1-204ENST00000588885 MADDQ8WXG6 1647 aa18.41■□□□□ 0.54
RFX1-204ENST00000588885 POGZQ7Z3K3 1410 aa18.41■□□□□ 0.54
RFX1-204ENST00000588885 RIMS1Q86UR5 1692 aaKnown RBP18.41■□□□□ 0.54
RFX1-204ENST00000588885 MLECQ14165 292 aa18.41■□□□□ 0.54
RFX1-204ENST00000588885 ZFYVE16Q7Z3T8 1539 aa18.4■□□□□ 0.54
RFX1-204ENST00000588885 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
RFX1-204ENST00000588885 PTPRMP28827 1452 aa18.38■□□□□ 0.53
RFX1-204ENST00000588885 ZMYM4Q5VZL5 1548 aa18.36■□□□□ 0.53
RFX1-204ENST00000588885 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
RFX1-204ENST00000588885 FER1L4A9Z1Z3 1794 aa18.35■□□□□ 0.53
RFX1-204ENST00000588885 CCNB3Q8WWL7 1395 aa18.35■□□□□ 0.53
RFX1-204ENST00000588885 HNRNPMP52272 730 aaKnown RBP eCLIP18.35■□□□□ 0.53
RFX1-204ENST00000588885 MAGI2Q86UL8 1455 aa18.34■□□□□ 0.53
RFX1-204ENST00000588885 TRAPPC8Q9Y2L5 1435 aa18.33■□□□□ 0.53
RFX1-204ENST00000588885 ARHGEF12Q9NZN5 1544 aa18.33■□□□□ 0.52
RFX1-204ENST00000588885 GPATCH8Q9UKJ3 1502 aaKnown RBP18.33■□□□□ 0.52
RFX1-204ENST00000588885 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.52
RFX1-204ENST00000588885 CDC42BPBQ9Y5S2 1711 aa18.31■□□□□ 0.52
RFX1-204ENST00000588885 ATP10AO60312 1499 aa18.31■□□□□ 0.52
RFX1-204ENST00000588885 ZNF644Q9H582 1327 aaPredicted RBP18.29■□□□□ 0.52
RFX1-204ENST00000588885 PREX2Q70Z35 1606 aa18.29■□□□□ 0.52
RFX1-204ENST00000588885 SIGLEC1Q9BZZ2 1709 aa18.28■□□□□ 0.52
RFX1-204ENST00000588885 C9orf84Q5VXU9 1444 aa18.27■□□□□ 0.52
RFX1-204ENST00000588885 ILDR1Q86SU0 546 aaPredicted RBP18.27■□□□□ 0.52
RFX1-204ENST00000588885 VPS8Q8N3P4 1428 aa18.26■□□□□ 0.51
RFX1-204ENST00000588885 ABCC1P33527 1531 aa18.26■□□□□ 0.51
RFX1-204ENST00000588885 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
RFX1-204ENST00000588885 CDC42BPAQ5VT25 1732 aa18.25■□□□□ 0.51
RFX1-204ENST00000588885 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
RFX1-204ENST00000588885 KDM5CP41229 1560 aa18.24■□□□□ 0.51
RFX1-204ENST00000588885 MLH3Q9UHC1 1453 aa18.23■□□□□ 0.51
RFX1-204ENST00000588885 KANK4Q5T7N3 995 aaPredicted RBP18.23■□□□□ 0.51
RFX1-204ENST00000588885 EHBP1L1Q8N3D4 1523 aa18.23■□□□□ 0.51
RFX1-204ENST00000588885 ITSN2Q9NZM3 1697 aa18.22■□□□□ 0.51
RFX1-204ENST00000588885 SAMD9LQ8IVG5 1584 aa18.22■□□□□ 0.51
RFX1-204ENST00000588885 SYCP2Q9BX26 1530 aa18.22■□□□□ 0.51
RFX1-204ENST00000588885 CEBPAP49715 358 aaPredicted RBP18.21■□□□□ 0.51
RFX1-204ENST00000588885 KIAA1107Q9UPP5 1409 aa18.2■□□□□ 0.5
RFX1-204ENST00000588885 NCOA2Q15596 1464 aa18.2■□□□□ 0.5
RFX1-204ENST00000588885 DIP2CQ9Y2E4 1556 aa18.18■□□□□ 0.5
RFX1-204ENST00000588885 LMTK3Q96Q04 1460 aa18.18■□□□□ 0.5
RFX1-204ENST00000588885 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
RFX1-204ENST00000588885 APLP2Q06481 763 aa18.17■□□□□ 0.5
RFX1-204ENST00000588885 PLEKHH2Q8IVE3 1493 aa18.17■□□□□ 0.5
RFX1-204ENST00000588885 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
RFX1-204ENST00000588885 ABCA6Q8N139 1617 aa18.16■□□□□ 0.5
RFX1-204ENST00000588885 LRRC9Q6ZRR7 1453 aa18.15■□□□□ 0.5
RFX1-204ENST00000588885 HSPA2P54652 639 aa18.15■□□□□ 0.5
RFX1-204ENST00000588885 PREX1Q8TCU6 1659 aa18.15■□□□□ 0.5
RFX1-204ENST00000588885 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
RFX1-204ENST00000588885 MBD5Q9P267 1494 aa18.12■□□□□ 0.49
RFX1-204ENST00000588885 KIDINS220Q9ULH0 1771 aa18.12■□□□□ 0.49
RFX1-204ENST00000588885 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
RFX1-204ENST00000588885 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
RFX1-204ENST00000588885 SUPT6HQ7KZ85 1726 aaKnown RBP18.1■□□□□ 0.49
RFX1-204ENST00000588885 GGT6Q6P531 493 aa18.1■□□□□ 0.49
RFX1-204ENST00000588885 REREQ9P2R6 1566 aa18.08■□□□□ 0.49
RFX1-204ENST00000588885 ATP7AQ04656 1500 aa18.08■□□□□ 0.49
RFX1-204ENST00000588885 AGLP35573 1532 aa18.08■□□□□ 0.48
RFX1-204ENST00000588885 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
RFX1-204ENST00000588885 A2MP01023 1474 aa18.07■□□□□ 0.48
RFX1-204ENST00000588885 C3P01024 1663 aa18.06■□□□□ 0.48
RFX1-204ENST00000588885 TSPY4P0CV99 314 aa18.06■□□□□ 0.48
RFX1-204ENST00000588885 TSPY10P0CW01 314 aa18.06■□□□□ 0.48
RFX1-204ENST00000588885 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
RFX1-204ENST00000588885 MAP3K1Q13233 1512 aa18.06■□□□□ 0.48
RFX1-204ENST00000588885 CCDC141Q6ZP82 1450 aa18.03■□□□□ 0.48
RFX1-204ENST00000588885 FBXO41Q8TF61 875 aa18.03■□□□□ 0.48
RFX1-204ENST00000588885 RTEL1-TNFRSF6BF6WH68 1400 aa18.02■□□□□ 0.48
RFX1-204ENST00000588885 UHRF1BP1Q6BDS2 1440 aa18.02■□□□□ 0.48
RFX1-204ENST00000588885 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.48
RFX1-204ENST00000588885 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
RFX1-204ENST00000588885 KIF3BO15066 747 aa18.01■□□□□ 0.47
RFX1-204ENST00000588885 DHX29Q7Z478 1369 aaKnown RBP18.01■□□□□ 0.47
RFX1-204ENST00000588885 ZMYM3Q14202 1370 aa18■□□□□ 0.47
RFX1-204ENST00000588885 CNTLNQ9NXG0 1405 aa17.98■□□□□ 0.47
RFX1-204ENST00000588885 ADGBQ8N7X0 1667 aa17.98■□□□□ 0.47
RFX1-204ENST00000588885 MROH2AA6NES4 1674 aa17.97■□□□□ 0.47
RFX1-204ENST00000588885 CLTCQ00610 1675 aaKnown RBP17.97■□□□□ 0.47
RFX1-204ENST00000588885 MIA2Q96PC5 1412 aa17.97■□□□□ 0.47
RFX1-204ENST00000588885 PLXNC1O60486 1568 aa17.96■□□□□ 0.46
RFX1-204ENST00000588885 STRCQ7RTU9 1775 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms