RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 PREX2Q70Z35 1606 aa21.97■■□□□ 1.11
NPC1-207ENST00000588867 PLCH2O75038 1416 aa21.97■■□□□ 1.11
NPC1-207ENST00000588867 ARHGAP5Q13017 1502 aa21.96■■□□□ 1.11
NPC1-207ENST00000588867 FAM69CQ0P6D2 419 aa21.96■■□□□ 1.11
NPC1-207ENST00000588867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.95■■□□□ 1.1
NPC1-207ENST00000588867 TCOF1Q13428 1488 aaKnown RBP21.94■■□□□ 1.1
NPC1-207ENST00000588867 EFCAB2Q5VUJ9 269 aa21.93■■□□□ 1.1
NPC1-207ENST00000588867 CD109Q6YHK3 1445 aa21.93■■□□□ 1.1
NPC1-207ENST00000588867 CAMSAP2Q08AD1 1489 aa21.92■■□□□ 1.1
NPC1-207ENST00000588867 DIP2BQ9P265 1576 aa21.9■■□□□ 1.1
NPC1-207ENST00000588867 GLI2P10070 1586 aa21.88■■□□□ 1.09
NPC1-207ENST00000588867 HNRNPMP52272 730 aaKnown RBP eCLIP21.87■■□□□ 1.09
NPC1-207ENST00000588867 SAMD9LQ8IVG5 1584 aa21.87■■□□□ 1.09
NPC1-207ENST00000588867 ARAP3Q8WWN8 1544 aa21.86■■□□□ 1.09
NPC1-207ENST00000588867 FANCAO15360 1455 aa21.86■■□□□ 1.09
NPC1-207ENST00000588867 MAP3K4Q9Y6R4 1608 aa21.84■■□□□ 1.09
NPC1-207ENST00000588867 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
NPC1-207ENST00000588867 KIF13AQ9H1H9 1805 aa21.81■■□□□ 1.08
NPC1-207ENST00000588867 DAPK1P53355 1430 aa21.81■■□□□ 1.08
NPC1-207ENST00000588867 PTPRKQ15262 1439 aa21.81■■□□□ 1.08
NPC1-207ENST00000588867 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
NPC1-207ENST00000588867 ABCC5O15440 1437 aa21.8■■□□□ 1.08
NPC1-207ENST00000588867 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
NPC1-207ENST00000588867 TSPOAP1O95153 1857 aa21.8■■□□□ 1.08
NPC1-207ENST00000588867 SYCP2Q9BX26 1530 aa21.79■■□□□ 1.08
NPC1-207ENST00000588867 TRHP20396 242 aaPredicted RBP21.79■■□□□ 1.08
NPC1-207ENST00000588867 AKNAQ7Z591 1439 aa21.78■■□□□ 1.08
NPC1-207ENST00000588867 KIAA1107Q9UPP5 1409 aa21.78■■□□□ 1.08
NPC1-207ENST00000588867 MBD5Q9P267 1494 aa21.78■■□□□ 1.08
NPC1-207ENST00000588867 RSPH4AQ5TD94 716 aa21.77■■□□□ 1.08
NPC1-207ENST00000588867 TSPY4P0CV99 314 aa21.77■■□□□ 1.07
NPC1-207ENST00000588867 TSPY10P0CW01 314 aa21.77■■□□□ 1.07
NPC1-207ENST00000588867 ARHGEF12Q9NZN5 1544 aa21.76■■□□□ 1.07
NPC1-207ENST00000588867 ADGRL1O94910 1474 aa21.76■■□□□ 1.07
NPC1-207ENST00000588867 ABCC1P33527 1531 aa21.76■■□□□ 1.07
NPC1-207ENST00000588867 CFAP74Q9C0B2 1584 aa21.75■■□□□ 1.07
NPC1-207ENST00000588867 SCAPERQ9BY12 1400 aa21.75■■□□□ 1.07
NPC1-207ENST00000588867 ARHGEF5Q12774 1597 aa21.74■■□□□ 1.07
NPC1-207ENST00000588867 CCDC141Q6ZP82 1450 aa21.73■■□□□ 1.07
NPC1-207ENST00000588867 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
NPC1-207ENST00000588867 NEO1Q92859 1461 aa21.73■■□□□ 1.07
NPC1-207ENST00000588867 AFAP1Q8N556 730 aa21.72■■□□□ 1.07
NPC1-207ENST00000588867 TRAPPC8Q9Y2L5 1435 aa21.71■■□□□ 1.07
NPC1-207ENST00000588867 CROCC2H7BZ55 1655 aa21.71■■□□□ 1.07
NPC1-207ENST00000588867 TEX14Q8IWB6 1497 aa21.7■■□□□ 1.06
NPC1-207ENST00000588867 PPRC1Q5VV67 1664 aaKnown RBP21.7■■□□□ 1.06
NPC1-207ENST00000588867 C9orf84Q5VXU9 1444 aa21.69■■□□□ 1.06
NPC1-207ENST00000588867 SHANK2Q9UPX8 1470 aa21.66■■□□□ 1.06
NPC1-207ENST00000588867 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
NPC1-207ENST00000588867 MYT1LQ9UL68 1186 aa21.66■■□□□ 1.06
NPC1-207ENST00000588867 ROCK1Q13464 1354 aa21.65■■□□□ 1.06
NPC1-207ENST00000588867 ANKRD30AQ9BXX3 1397 aa21.65■■□□□ 1.06
NPC1-207ENST00000588867 SPAG9O60271 1321 aaKnown RBP21.64■■□□□ 1.06
NPC1-207ENST00000588867 ADGBQ8N7X0 1667 aa21.64■■□□□ 1.05
NPC1-207ENST00000588867 HFM1A2PYH4 1435 aa21.64■■□□□ 1.05
NPC1-207ENST00000588867 NCOA1Q15788 1441 aa21.63■■□□□ 1.05
NPC1-207ENST00000588867 RAPGEF3O95398 923 aa21.63■■□□□ 1.05
NPC1-207ENST00000588867 DENND4BO75064 1496 aaPredicted RBP21.62■■□□□ 1.05
NPC1-207ENST00000588867 NAIPQ13075 1403 aa21.62■■□□□ 1.05
NPC1-207ENST00000588867 RAB3GAP2Q9H2M9 1393 aa21.61■■□□□ 1.05
NPC1-207ENST00000588867 ADGRL2O95490 1459 aa21.61■■□□□ 1.05
NPC1-207ENST00000588867 ZNF518AQ6AHZ1 1483 aa21.61■■□□□ 1.05
NPC1-207ENST00000588867 POGZQ7Z3K3 1410 aa21.6■■□□□ 1.05
NPC1-207ENST00000588867 MAST1Q9Y2H9 1570 aa21.6■■□□□ 1.05
NPC1-207ENST00000588867 GCC2Q8IWJ2 1684 aa21.57■■□□□ 1.04
NPC1-207ENST00000588867 KIF15Q9NS87 1388 aa21.57■■□□□ 1.04
NPC1-207ENST00000588867 RTEL1-TNFRSF6BF6WH68 1400 aa21.55■■□□□ 1.04
NPC1-207ENST00000588867 ATP7AQ04656 1500 aa21.54■■□□□ 1.04
NPC1-207ENST00000588867 RICTORQ6R327 1708 aa21.54■■□□□ 1.04
NPC1-207ENST00000588867 ZFYVE16Q7Z3T8 1539 aa21.54■■□□□ 1.04
NPC1-207ENST00000588867 KDM5CP41229 1560 aa21.53■■□□□ 1.04
NPC1-207ENST00000588867 HRCP23327 699 aa21.52■■□□□ 1.04
NPC1-207ENST00000588867 INO80Q9ULG1 1556 aaPredicted RBP21.52■■□□□ 1.04
NPC1-207ENST00000588867 KDM6BO15054 1643 aa21.51■■□□□ 1.03
NPC1-207ENST00000588867 PLXNC1O60486 1568 aa21.51■■□□□ 1.03
NPC1-207ENST00000588867 ANKRD50Q9ULJ7 1429 aa21.51■■□□□ 1.03
NPC1-207ENST00000588867 COL17A1Q9UMD9 1497 aaPredicted RBP21.5■■□□□ 1.03
NPC1-207ENST00000588867 KIDINS220Q9ULH0 1771 aa21.5■■□□□ 1.03
NPC1-207ENST00000588867 HECW2Q9P2P5 1572 aa21.49■■□□□ 1.03
NPC1-207ENST00000588867 MLH3Q9UHC1 1453 aa21.49■■□□□ 1.03
NPC1-207ENST00000588867 FRMPD1Q5SYB0 1578 aa21.48■■□□□ 1.03
NPC1-207ENST00000588867 CCER1Q8TC90 406 aaPredicted RBP21.48■■□□□ 1.03
NPC1-207ENST00000588867 TRIM52Q96A61 297 aa21.48■■□□□ 1.03
NPC1-207ENST00000588867 DUOX2Q9NRD8 1548 aa21.46■■□□□ 1.03
NPC1-207ENST00000588867 ZMYM4Q5VZL5 1548 aa21.42■■□□□ 1.02
NPC1-207ENST00000588867 YEATS2Q9ULM3 1422 aa21.41■■□□□ 1.02
NPC1-207ENST00000588867 DHX29Q7Z478 1369 aaKnown RBP21.41■■□□□ 1.02
NPC1-207ENST00000588867 ABCA6Q8N139 1617 aa21.41■■□□□ 1.02
NPC1-207ENST00000588867 ERBINQ96RT1 1412 aa21.4■■□□□ 1.02
NPC1-207ENST00000588867 ACIN1Q9UKV3 1341 aaKnown RBP21.4■■□□□ 1.02
NPC1-207ENST00000588867 DHX57Q6P158 1386 aaKnown RBP21.4■■□□□ 1.02
NPC1-207ENST00000588867 A2MP01023 1474 aa21.39■■□□□ 1.01
NPC1-207ENST00000588867 MAGI2Q86UL8 1455 aa21.39■■□□□ 1.01
NPC1-207ENST00000588867 DIP2CQ9Y2E4 1556 aa21.38■■□□□ 1.01
NPC1-207ENST00000588867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.38■■□□□ 1.011e-6■□□□□ 8.7
NPC1-207ENST00000588867 KIF3BO15066 747 aa21.37■■□□□ 1.01
NPC1-207ENST00000588867 NUP155O75694 1391 aa21.35■■□□□ 1.01
NPC1-207ENST00000588867 MPHOSPH9Q99550 1183 aa21.33■■□□□ 1.01
NPC1-207ENST00000588867 ATP10AO60312 1499 aa21.33■■□□□ 1.01
NPC1-207ENST00000588867 SLC4A1APQ9BWU0 796 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms