RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 HDAC5Q9UQL6 1122 aa10.01□□□□□ -0.81
LAMA3-210ENST00000588770 CC2D1BQ5T0F9 858 aaKnown RBP10.01□□□□□ -0.81
LAMA3-210ENST00000588770 ZNF771Q7L3S4 317 aaPredicted RBP10.01□□□□□ -0.81
LAMA3-210ENST00000588770 EEA1Q15075 1411 aa10.01□□□□□ -0.81
LAMA3-210ENST00000588770 FBXO3Q9UK99 471 aa10.01□□□□□ -0.81
LAMA3-210ENST00000588770 DCAF11Q8TEB1 546 aa10.01□□□□□ -0.81
LAMA3-210ENST00000588770 ESPNB1AK53 854 aa10□□□□□ -0.81
LAMA3-210ENST00000588770 FRAT2O75474 233 aaPredicted RBP10□□□□□ -0.81
LAMA3-210ENST00000588770 PDE4AP27815 886 aa10□□□□□ -0.81
LAMA3-210ENST00000588770 SLC4A3P48751 1232 aa9.99□□□□□ -0.81
LAMA3-210ENST00000588770 TPRNQ4KMQ1 711 aa9.99□□□□□ -0.81
LAMA3-210ENST00000588770 CGNQ9P2M7 1197 aaKnown RBP9.99□□□□□ -0.81
LAMA3-210ENST00000588770 FAM50AQ14320 339 aaKnown RBP9.99□□□□□ -0.81
LAMA3-210ENST00000588770 ZNF830Q96NB3 372 aaPredicted RBP9.99□□□□□ -0.81
LAMA3-210ENST00000588770 BECN1Q14457 450 aa9.98□□□□□ -0.81
LAMA3-210ENST00000588770 KIF20AO95235 890 aa9.98□□□□□ -0.81
LAMA3-210ENST00000588770 AXDND1Q5T1B0 1012 aaPredicted RBP9.98□□□□□ -0.81
LAMA3-210ENST00000588770 SENP3-EIF4A1A0A087X0R7 540 aa9.98□□□□□ -0.81
LAMA3-210ENST00000588770 LETM1O95202 739 aaPredicted RBP9.98□□□□□ -0.81
LAMA3-210ENST00000588770 BAZ1BQ9UIG0 1483 aaKnown RBP9.97□□□□□ -0.81
LAMA3-210ENST00000588770 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
LAMA3-210ENST00000588770 MRS2Q9HD23 443 aa9.97□□□□□ -0.81
LAMA3-210ENST00000588770 UTP14CQ5TAP6 766 aaKnown RBP9.96□□□□□ -0.82
LAMA3-210ENST00000588770 DNAJC2Q99543 621 aaKnown RBP9.96□□□□□ -0.82
LAMA3-210ENST00000588770 GTPBP4Q9BZE4 634 aaKnown RBP9.95□□□□□ -0.82
LAMA3-210ENST00000588770 PLCD4Q9BRC7 762 aa9.95□□□□□ -0.82
LAMA3-210ENST00000588770 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
LAMA3-210ENST00000588770 R3HCC1Q9Y3T6 440 aaKnown RBP9.95□□□□□ -0.82
LAMA3-210ENST00000588770 ZNF622Q969S3 477 aaKnown RBP eCLIP9.94□□□□□ -0.82
LAMA3-210ENST00000588770 DMTNQ08495 405 aa9.93□□□□□ -0.82
LAMA3-210ENST00000588770 CCDC66A2RUB6 948 aa9.93□□□□□ -0.82
LAMA3-210ENST00000588770 MRE11P49959 708 aa9.92□□□□□ -0.82
LAMA3-210ENST00000588770 TMEM51Q9NW97 253 aa9.91□□□□□ -0.82
LAMA3-210ENST00000588770 P3H3Q8IVL6 736 aa9.9□□□□□ -0.82
LAMA3-210ENST00000588770 UPF2Q9HAU5 1272 aaKnown RBP9.9□□□□□ -0.82
LAMA3-210ENST00000588770 POGKQ9P215 609 aa9.9□□□□□ -0.82
LAMA3-210ENST00000588770 KCNJ4P48050 445 aa9.9□□□□□ -0.83
LAMA3-210ENST00000588770 CERS3Q8IU89 383 aa9.9□□□□□ -0.83
LAMA3-210ENST00000588770 SIN3AQ96ST3 1273 aa9.9□□□□□ -0.83
LAMA3-210ENST00000588770 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.9□□□□□ -0.83
LAMA3-210ENST00000588770 UQCRHLA0A096LP55 91 aa9.89□□□□□ -0.83
LAMA3-210ENST00000588770 UQCRHP07919 91 aa9.89□□□□□ -0.83
LAMA3-210ENST00000588770 MS4A1P11836 297 aa9.89□□□□□ -0.83
LAMA3-210ENST00000588770 CFAP44Q96MT7 982 aa9.89□□□□□ -0.83
LAMA3-210ENST00000588770 OS9Q13438 667 aaPredicted RBP9.89□□□□□ -0.83
LAMA3-210ENST00000588770 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
LAMA3-210ENST00000588770 ZNF526Q8TF50 670 aaPredicted RBP9.87□□□□□ -0.83
LAMA3-210ENST00000588770 CBX1P83916 185 aa9.87□□□□□ -0.83
LAMA3-210ENST00000588770 TSPYL1Q9H0U9 437 aa9.87□□□□□ -0.83
LAMA3-210ENST00000588770 CCDC94Q9BW85 323 aaPredicted RBP9.86□□□□□ -0.83
LAMA3-210ENST00000588770 SLKQ9H2G2 1235 aaPredicted RBP9.86□□□□□ -0.83
LAMA3-210ENST00000588770 CLSTN1O94985 981 aa9.86□□□□□ -0.83
LAMA3-210ENST00000588770 CSPP1Q1MSJ5 1256 aa9.86□□□□□ -0.83
LAMA3-210ENST00000588770 BACH2Q9BYV9 841 aa9.85□□□□□ -0.83
LAMA3-210ENST00000588770 TMC1Q8TDI8 760 aa9.85□□□□□ -0.83
LAMA3-210ENST00000588770 TICAM2Q86XR7 235 aa9.85□□□□□ -0.83
LAMA3-210ENST00000588770 STK11IPQ8N1F8 1099 aa9.84□□□□□ -0.83
LAMA3-210ENST00000588770 ESF1Q9H501 851 aaKnown RBP9.84□□□□□ -0.83
LAMA3-210ENST00000588770 TONSLQ96HA7 1378 aa9.84□□□□□ -0.83
LAMA3-210ENST00000588770 XRCC6P12956 609 aaKnown RBP eCLIP9.84□□□□□ -0.83
LAMA3-210ENST00000588770 FOXD1Q16676 465 aa9.84□□□□□ -0.83
LAMA3-210ENST00000588770 GOLGA6L22H0YM25 854 aa9.83□□□□□ -0.84
LAMA3-210ENST00000588770 MYCNP04198 464 aaPredicted RBP9.83□□□□□ -0.84
LAMA3-210ENST00000588770 LMOD3Q0VAK6 560 aa9.83□□□□□ -0.84
LAMA3-210ENST00000588770 RALBP1Q15311 655 aa9.83□□□□□ -0.84
LAMA3-210ENST00000588770 DYNC1I1O14576 645 aa9.83□□□□□ -0.84
LAMA3-210ENST00000588770 SOX12O15370 315 aa9.83□□□□□ -0.84
LAMA3-210ENST00000588770 ZNF592Q92610 1267 aa9.83□□□□□ -0.84
LAMA3-210ENST00000588770 RNF216Q9NWF9 866 aaPredicted RBP9.83□□□□□ -0.84
LAMA3-210ENST00000588770 VGFO15240 615 aaPredicted RBP9.82□□□□□ -0.84
LAMA3-210ENST00000588770 PSMD1Q99460 953 aa9.82□□□□□ -0.84
LAMA3-210ENST00000588770 BANK1Q8NDB2 785 aa9.82□□□□□ -0.84
LAMA3-210ENST00000588770 TRIM6-TRIM34B2RNG4 842 aa9.81□□□□□ -0.84
LAMA3-210ENST00000588770 CHRM1P11229 460 aaPredicted RBP9.81□□□□□ -0.84
LAMA3-210ENST00000588770 TRIM34Q9BYJ4 488 aa9.81□□□□□ -0.84
LAMA3-210ENST00000588770 TERF1P54274 439 aa9.8□□□□□ -0.84
LAMA3-210ENST00000588770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
LAMA3-210ENST00000588770 TIGD1Q96MW7 591 aa9.8□□□□□ -0.84
LAMA3-210ENST00000588770 ZSCAN30Q86W11 494 aa9.8□□□□□ -0.84
LAMA3-210ENST00000588770 KIF3AQ9Y496 699 aa9.8□□□□□ -0.84
LAMA3-210ENST00000588770 GRPEL1Q9HAV7 217 aa9.8□□□□□ -0.84
LAMA3-210ENST00000588770 PANK2Q9BZ23 570 aa9.8□□□□□ -0.84
LAMA3-210ENST00000588770 OFD1O75665 1012 aa9.79□□□□□ -0.84
LAMA3-210ENST00000588770 PHF14O94880 888 aa9.79□□□□□ -0.84
LAMA3-210ENST00000588770 MCCP23508 829 aa9.79□□□□□ -0.84
LAMA3-210ENST00000588770 ISY1Q9ULR0 285 aaKnown RBP9.79□□□□□ -0.84
LAMA3-210ENST00000588770 CHAF1AQ13111 956 aaPredicted RBP9.78□□□□□ -0.84
LAMA3-210ENST00000588770 GOLGA6L6A8MZA4 724 aa9.77□□□□□ -0.84
LAMA3-210ENST00000588770 ZBTB7CA1YPR0 619 aa9.77□□□□□ -0.85
LAMA3-210ENST00000588770 CALCOCO1Q9P1Z2 691 aa9.77□□□□□ -0.85
LAMA3-210ENST00000588770 GTF2A1P52655 376 aaPredicted RBP9.77□□□□□ -0.85
LAMA3-210ENST00000588770 CCDC173Q0VFZ6 552 aa9.76□□□□□ -0.85
LAMA3-210ENST00000588770 NEFHP12036 1026 aa9.76□□□□□ -0.85
LAMA3-210ENST00000588770 ZBTB22O15209 634 aa9.76□□□□□ -0.85
LAMA3-210ENST00000588770 NBPF1Q3BBV0 1214 aa9.75□□□□□ -0.85
LAMA3-210ENST00000588770 SPRYD3Q8NCJ5 442 aa9.75□□□□□ -0.85
LAMA3-210ENST00000588770 KCNG1Q9UIX4 513 aa9.75□□□□□ -0.85
LAMA3-210ENST00000588770 GPATCH11Q8N954 259 aa9.75□□□□□ -0.85
LAMA3-210ENST00000588770 SASS6Q6UVJ0 657 aa9.74□□□□□ -0.85
LAMA3-210ENST00000588770 TMED8Q6PL24 325 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms