RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 FAM9AQ8IZU1 332 aaPredicted RBP12.77□□□□□ -0.37
GPATCH8-206ENST00000588554 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
GPATCH8-206ENST00000588554 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
GPATCH8-206ENST00000588554 GOLGA3Q08378 1498 aa12.75□□□□□ -0.37
GPATCH8-206ENST00000588554 MAP3K4Q9Y6R4 1608 aa12.74□□□□□ -0.37
GPATCH8-206ENST00000588554 ABCA8O94911 1581 aa12.74□□□□□ -0.37
GPATCH8-206ENST00000588554 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
GPATCH8-206ENST00000588554 WDR7Q9Y4E6 1490 aa12.73□□□□□ -0.37
GPATCH8-206ENST00000588554 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
GPATCH8-206ENST00000588554 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
GPATCH8-206ENST00000588554 ATP10BO94823 1461 aa12.68□□□□□ -0.38
GPATCH8-206ENST00000588554 TEX14Q8IWB6 1497 aa12.68□□□□□ -0.38
GPATCH8-206ENST00000588554 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
GPATCH8-206ENST00000588554 ADGRL1O94910 1474 aa12.66□□□□□ -0.38
GPATCH8-206ENST00000588554 SAMD9Q5K651 1589 aa12.64□□□□□ -0.39
GPATCH8-206ENST00000588554 MAGI3Q5TCQ9 1506 aa12.63□□□□□ -0.39
GPATCH8-206ENST00000588554 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
GPATCH8-206ENST00000588554 CFAP43Q8NDM7 1665 aa12.62□□□□□ -0.39
GPATCH8-206ENST00000588554 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
GPATCH8-206ENST00000588554 RAPGEF6Q8TEU7 1601 aa12.59□□□□□ -0.39
GPATCH8-206ENST00000588554 RAPGEF3O95398 923 aa12.59□□□□□ -0.39
GPATCH8-206ENST00000588554 NUP153P49790 1475 aaKnown RBP12.59□□□□□ -0.39
GPATCH8-206ENST00000588554 EEA1Q15075 1411 aa12.58□□□□□ -0.4
GPATCH8-206ENST00000588554 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
GPATCH8-206ENST00000588554 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
GPATCH8-206ENST00000588554 ABCA9Q8IUA7 1624 aa12.55□□□□□ -0.4
GPATCH8-206ENST00000588554 ARAP3Q8WWN8 1544 aa12.54□□□□□ -0.4
GPATCH8-206ENST00000588554 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
GPATCH8-206ENST00000588554 PRKAR2AP13861 404 aaKnown RBP12.54□□□□□ -0.4
GPATCH8-206ENST00000588554 KIF21BO75037 1637 aa12.53□□□□□ -0.4
GPATCH8-206ENST00000588554 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.41
GPATCH8-206ENST00000588554 CDK13Q14004 1512 aaKnown RBP12.49□□□□□ -0.41
GPATCH8-206ENST00000588554 HECW2Q9P2P5 1572 aa12.48□□□□□ -0.41
GPATCH8-206ENST00000588554 NEO1Q92859 1461 aa12.47□□□□□ -0.41
GPATCH8-206ENST00000588554 PHLDB1Q86UU1 1377 aa12.47□□□□□ -0.41
GPATCH8-206ENST00000588554 FRMPD1Q5SYB0 1578 aa12.47□□□□□ -0.41
GPATCH8-206ENST00000588554 EFCAB5A4FU69 1503 aa12.47□□□□□ -0.41
GPATCH8-206ENST00000588554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.47□□□□□ -0.41
GPATCH8-206ENST00000588554 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
GPATCH8-206ENST00000588554 ILDR1Q86SU0 546 aaPredicted RBP12.45□□□□□ -0.42
GPATCH8-206ENST00000588554 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
GPATCH8-206ENST00000588554 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
GPATCH8-206ENST00000588554 TTC37Q6PGP7 1564 aa12.44□□□□□ -0.42
GPATCH8-206ENST00000588554 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
GPATCH8-206ENST00000588554 FANCAO15360 1455 aa12.44□□□□□ -0.42
GPATCH8-206ENST00000588554 HAX1O00165 279 aa12.43□□□□□ -0.42
GPATCH8-206ENST00000588554 PROM2Q8N271 834 aa12.43□□□□□ -0.42
GPATCH8-206ENST00000588554 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
GPATCH8-206ENST00000588554 PTPRMP28827 1452 aa12.4□□□□□ -0.42
GPATCH8-206ENST00000588554 FKBP8Q14318 412 aa12.4□□□□□ -0.42
GPATCH8-206ENST00000588554 ADAMTSL3P82987 1691 aa12.4□□□□□ -0.42
GPATCH8-206ENST00000588554 RICTORQ6R327 1708 aa12.4□□□□□ -0.43
GPATCH8-206ENST00000588554 YEATS2Q9ULM3 1422 aa12.39□□□□□ -0.43
GPATCH8-206ENST00000588554 PLCH2O75038 1416 aa12.38□□□□□ -0.43
GPATCH8-206ENST00000588554 FMN1Q68DA7 1419 aa12.38□□□□□ -0.43
GPATCH8-206ENST00000588554 SCAPERQ9BY12 1400 aa12.38□□□□□ -0.43
GPATCH8-206ENST00000588554 MLECQ14165 292 aa12.38□□□□□ -0.43
GPATCH8-206ENST00000588554 SIGLEC1Q9BZZ2 1709 aa12.37□□□□□ -0.43
GPATCH8-206ENST00000588554 BCORL1Q5H9F3 1711 aa12.37□□□□□ -0.43
GPATCH8-206ENST00000588554 KIF14Q15058 1648 aa12.37□□□□□ -0.43
GPATCH8-206ENST00000588554 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
GPATCH8-206ENST00000588554 MADDQ8WXG6 1647 aa12.37□□□□□ -0.43
GPATCH8-206ENST00000588554 LRRIQ1Q96JM4 1722 aa12.36□□□□□ -0.43
GPATCH8-206ENST00000588554 EFCAB2Q5VUJ9 269 aa12.35□□□□□ -0.43
GPATCH8-206ENST00000588554 CDK11AQ9UQ88 783 aaPredicted RBP12.35□□□□□ -0.43
GPATCH8-206ENST00000588554 ARHGEF40Q8TER5 1519 aa12.34□□□□□ -0.43
GPATCH8-206ENST00000588554 AFAP1Q8N556 730 aa12.34□□□□□ -0.43
GPATCH8-206ENST00000588554 CFAP74Q9C0B2 1584 aa12.34□□□□□ -0.43
GPATCH8-206ENST00000588554 ZFYVE16Q7Z3T8 1539 aa12.33□□□□□ -0.44
GPATCH8-206ENST00000588554 RIMS1Q86UR5 1692 aaKnown RBP12.32□□□□□ -0.44
GPATCH8-206ENST00000588554 TROQ12816 1431 aaPredicted RBP12.32□□□□□ -0.44
GPATCH8-206ENST00000588554 POGZQ7Z3K3 1410 aa12.32□□□□□ -0.44
GPATCH8-206ENST00000588554 HSPA2P54652 639 aa12.32□□□□□ -0.44
GPATCH8-206ENST00000588554 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
GPATCH8-206ENST00000588554 FARP1Q9Y4F1 1045 aaPredicted RBP12.31□□□□□ -0.44
GPATCH8-206ENST00000588554 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
GPATCH8-206ENST00000588554 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
GPATCH8-206ENST00000588554 MYO5CQ9NQX4 1742 aa12.3□□□□□ -0.44
GPATCH8-206ENST00000588554 ARHGAP5Q13017 1502 aa12.29□□□□□ -0.44
GPATCH8-206ENST00000588554 CEBPAP49715 358 aaPredicted RBP12.29□□□□□ -0.44
GPATCH8-206ENST00000588554 PCF11O94913 1555 aaKnown RBP12.29□□□□□ -0.44
GPATCH8-206ENST00000588554 CASKIN1Q8WXD9 1431 aa12.28□□□□□ -0.44
GPATCH8-206ENST00000588554 ATP10AO60312 1499 aa12.28□□□□□ -0.44
GPATCH8-206ENST00000588554 MAGI2Q86UL8 1455 aa12.28□□□□□ -0.44
GPATCH8-206ENST00000588554 LMTK3Q96Q04 1460 aa12.28□□□□□ -0.44
GPATCH8-206ENST00000588554 EVX2Q03828 476 aa12.28□□□□□ -0.44
GPATCH8-206ENST00000588554 CLIP1P30622 1438 aa12.28□□□□□ -0.44
GPATCH8-206ENST00000588554 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.45
GPATCH8-206ENST00000588554 TRAPPC8Q9Y2L5 1435 aa12.26□□□□□ -0.45
GPATCH8-206ENST00000588554 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
GPATCH8-206ENST00000588554 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
GPATCH8-206ENST00000588554 ZNF777Q9ULD5 760 aaPredicted RBP12.25□□□□□ -0.45
GPATCH8-206ENST00000588554 ZNF518AQ6AHZ1 1483 aa12.23□□□□□ -0.45
GPATCH8-206ENST00000588554 C9orf84Q5VXU9 1444 aa12.23□□□□□ -0.45
GPATCH8-206ENST00000588554 CCDC18Q5T9S5 1454 aa12.21□□□□□ -0.45
GPATCH8-206ENST00000588554 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.45
GPATCH8-206ENST00000588554 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■□□□□ 9.4
GPATCH8-206ENST00000588554 KDM5CP41229 1560 aa12.21□□□□□ -0.46
GPATCH8-206ENST00000588554 PREX2Q70Z35 1606 aa12.2□□□□□ -0.46
GPATCH8-206ENST00000588554 DIP2CQ9Y2E4 1556 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms