RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 PHLDB1Q86UU1 1377 aa20.24■□□□□ 0.83
NEDD4L-223ENST00000588516 FHOD3Q2V2M9 1422 aa20.23■□□□□ 0.83
NEDD4L-223ENST00000588516 UGGT2Q9NYU1 1516 aa20.23■□□□□ 0.83
NEDD4L-223ENST00000588516 SOCS7O14512 581 aa20.22■□□□□ 0.83
NEDD4L-223ENST00000588516 ARID4BQ4LE39 1312 aaPredicted RBP20.21■□□□□ 0.83
NEDD4L-223ENST00000588516 KIAA0556O60303 1618 aa20.21■□□□□ 0.83
NEDD4L-223ENST00000588516 DISP3Q9P2K9 1392 aa20.21■□□□□ 0.83
NEDD4L-223ENST00000588516 ITGAEP38570 1179 aa20.21■□□□□ 0.83
NEDD4L-223ENST00000588516 ILDR2Q71H61 639 aa20.21■□□□□ 0.83
NEDD4L-223ENST00000588516 FAM50AQ14320 339 aaKnown RBP20.2■□□□□ 0.82
NEDD4L-223ENST00000588516 ADAMTSL3P82987 1691 aa20.19■□□□□ 0.82
NEDD4L-223ENST00000588516 CERKQ8TCT0 537 aa20.19■□□□□ 0.82
NEDD4L-223ENST00000588516 ATP1B4Q9UN42 357 aaPredicted RBP20.18■□□□□ 0.82
NEDD4L-223ENST00000588516 ARAP3Q8WWN8 1544 aa20.18■□□□□ 0.82
NEDD4L-223ENST00000588516 HSPA2P54652 639 aa20.16■□□□□ 0.82
NEDD4L-223ENST00000588516 PLPPR3Q6T4P5 718 aa20.15■□□□□ 0.82
NEDD4L-223ENST00000588516 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
NEDD4L-223ENST00000588516 MTUS2Q5JR59 1369 aa20.15■□□□□ 0.82
NEDD4L-223ENST00000588516 CCDC18Q5T9S5 1454 aa20.15■□□□□ 0.82
NEDD4L-223ENST00000588516 RAPGEF3O95398 923 aa20.14■□□□□ 0.81
NEDD4L-223ENST00000588516 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
NEDD4L-223ENST00000588516 SUPT6HQ7KZ85 1726 aaKnown RBP20.12■□□□□ 0.81
NEDD4L-223ENST00000588516 EHBP1L1Q8N3D4 1523 aa20.12■□□□□ 0.81
NEDD4L-223ENST00000588516 ARID3CA6NKF2 412 aa20.11■□□□□ 0.81
NEDD4L-223ENST00000588516 YTHDC1Q96MU7 727 aaKnown RBP20.1■□□□□ 0.81
NEDD4L-223ENST00000588516 MADDQ8WXG6 1647 aa20.1■□□□□ 0.81
NEDD4L-223ENST00000588516 BCORL1Q5H9F3 1711 aa20.09■□□□□ 0.81
NEDD4L-223ENST00000588516 ABCA8O94911 1581 aa20.07■□□□□ 0.8
NEDD4L-223ENST00000588516 MYOM3Q5VTT5 1437 aa20.05■□□□□ 0.8
NEDD4L-223ENST00000588516 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
NEDD4L-223ENST00000588516 HFM1A2PYH4 1435 aa20.03■□□□□ 0.8
NEDD4L-223ENST00000588516 RIMS1Q86UR5 1692 aaKnown RBP20.02■□□□□ 0.8
NEDD4L-223ENST00000588516 NCOA2Q15596 1464 aa20.01■□□□□ 0.79
NEDD4L-223ENST00000588516 NEO1Q92859 1461 aa19.97■□□□□ 0.79
NEDD4L-223ENST00000588516 PTPN23Q9H3S7 1636 aa19.96■□□□□ 0.79
NEDD4L-223ENST00000588516 AKNAQ7Z591 1439 aa19.96■□□□□ 0.79
NEDD4L-223ENST00000588516 ABCA9Q8IUA7 1624 aa19.95■□□□□ 0.78
NEDD4L-223ENST00000588516 ATP10BO94823 1461 aa19.95■□□□□ 0.78
NEDD4L-223ENST00000588516 TCOF1Q13428 1488 aaKnown RBP19.95■□□□□ 0.78
NEDD4L-223ENST00000588516 LRRIQ1Q96JM4 1722 aa19.94■□□□□ 0.78
NEDD4L-223ENST00000588516 MIA2Q96PC5 1412 aa19.94■□□□□ 0.78
NEDD4L-223ENST00000588516 PPP1R15AO75807 674 aaPredicted RBP19.94■□□□□ 0.78
NEDD4L-223ENST00000588516 POGZQ7Z3K3 1410 aa19.93■□□□□ 0.78
NEDD4L-223ENST00000588516 TONSLQ96HA7 1378 aa19.92■□□□□ 0.78
NEDD4L-223ENST00000588516 MLECQ14165 292 aa19.92■□□□□ 0.78
NEDD4L-223ENST00000588516 FRMPD1Q5SYB0 1578 aa19.92■□□□□ 0.78
NEDD4L-223ENST00000588516 SPATA31D1Q6ZQQ2 1576 aa19.9■□□□□ 0.78
NEDD4L-223ENST00000588516 ARHGEF40Q8TER5 1519 aa19.89■□□□□ 0.77
NEDD4L-223ENST00000588516 NAIPQ13075 1403 aa19.88■□□□□ 0.77
NEDD4L-223ENST00000588516 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
NEDD4L-223ENST00000588516 FANCAO15360 1455 aa19.87■□□□□ 0.77
NEDD4L-223ENST00000588516 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
NEDD4L-223ENST00000588516 SIN3AQ96ST3 1273 aa19.86■□□□□ 0.77
NEDD4L-223ENST00000588516 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
NEDD4L-223ENST00000588516 FOXD1Q16676 465 aa19.84■□□□□ 0.77
NEDD4L-223ENST00000588516 CDK11AQ9UQ88 783 aaPredicted RBP19.83■□□□□ 0.77
NEDD4L-223ENST00000588516 CCER2I3L3R5 266 aa19.82■□□□□ 0.76
NEDD4L-223ENST00000588516 YEATS2Q9ULM3 1422 aa19.81■□□□□ 0.76
NEDD4L-223ENST00000588516 MYT1Q01538 1121 aa19.79■□□□□ 0.76
NEDD4L-223ENST00000588516 PTPRKQ15262 1439 aa19.79■□□□□ 0.76
NEDD4L-223ENST00000588516 ROCK1Q13464 1354 aa19.77■□□□□ 0.76
NEDD4L-223ENST00000588516 RICTORQ6R327 1708 aa19.77■□□□□ 0.76
NEDD4L-223ENST00000588516 ZFYVE16Q7Z3T8 1539 aa19.77■□□□□ 0.75
NEDD4L-223ENST00000588516 ANP32CO43423 234 aa19.76■□□□□ 0.75
NEDD4L-223ENST00000588516 CEBPAP49715 358 aaPredicted RBP19.76■□□□□ 0.75
NEDD4L-223ENST00000588516 FER1L4A9Z1Z3 1794 aa19.76■□□□□ 0.75
NEDD4L-223ENST00000588516 TTC37Q6PGP7 1564 aa19.75■□□□□ 0.75
NEDD4L-223ENST00000588516 PLEKHD1A6NEE1 506 aa19.75■□□□□ 0.75
NEDD4L-223ENST00000588516 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
NEDD4L-223ENST00000588516 RAPGEF6Q8TEU7 1601 aa19.73■□□□□ 0.75
NEDD4L-223ENST00000588516 SIGLEC1Q9BZZ2 1709 aa19.72■□□□□ 0.75
NEDD4L-223ENST00000588516 PREX1Q8TCU6 1659 aa19.72■□□□□ 0.75
NEDD4L-223ENST00000588516 ZMYM4Q5VZL5 1548 aa19.71■□□□□ 0.75
NEDD4L-223ENST00000588516 UHRF1BP1Q6BDS2 1440 aa19.7■□□□□ 0.74
NEDD4L-223ENST00000588516 MAGI2Q86UL8 1455 aa19.7■□□□□ 0.74
NEDD4L-223ENST00000588516 CFAP74Q9C0B2 1584 aa19.69■□□□□ 0.74
NEDD4L-223ENST00000588516 STRCQ7RTU9 1775 aa19.69■□□□□ 0.74
NEDD4L-223ENST00000588516 DNMT1P26358 1616 aaKnown RBP19.67■□□□□ 0.74
NEDD4L-223ENST00000588516 CDK13Q14004 1512 aaKnown RBP19.66■□□□□ 0.74
NEDD4L-223ENST00000588516 ITSN2Q9NZM3 1697 aa19.66■□□□□ 0.74
NEDD4L-223ENST00000588516 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
NEDD4L-223ENST00000588516 PTPRTO14522 1441 aa19.66■□□□□ 0.74
NEDD4L-223ENST00000588516 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
NEDD4L-223ENST00000588516 ARHGEF12Q9NZN5 1544 aa19.65■□□□□ 0.74
NEDD4L-223ENST00000588516 ATP10AO60312 1499 aa19.63■□□□□ 0.73
NEDD4L-223ENST00000588516 DAPK1P53355 1430 aa19.63■□□□□ 0.73
NEDD4L-223ENST00000588516 SCAPERQ9BY12 1400 aa19.63■□□□□ 0.73
NEDD4L-223ENST00000588516 RRP7BPQ9NSQ0 103 aa19.63■□□□□ 0.73
NEDD4L-223ENST00000588516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.62■□□□□ 0.73
NEDD4L-223ENST00000588516 C9orf84Q5VXU9 1444 aa19.62■□□□□ 0.73
NEDD4L-223ENST00000588516 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
NEDD4L-223ENST00000588516 MPHOSPH9Q99550 1183 aa19.61■□□□□ 0.73
NEDD4L-223ENST00000588516 SETD1BQ9UPS6 1966 aaKnown RBP19.61■□□□□ 0.73
NEDD4L-223ENST00000588516 TROQ12816 1431 aaPredicted RBP19.6■□□□□ 0.73
NEDD4L-223ENST00000588516 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
NEDD4L-223ENST00000588516 LTBP4Q8N2S1 1624 aa19.58■□□□□ 0.73
NEDD4L-223ENST00000588516 CHIC2Q9UKJ5 165 aa19.58■□□□□ 0.73
NEDD4L-223ENST00000588516 IQSEC2Q5JU85 1478 aa19.58■□□□□ 0.73
NEDD4L-223ENST00000588516 UBAP1LF5GYI3 381 aa19.57■□□□□ 0.72
NEDD4L-223ENST00000588516 EIF4G2P78344 907 aaKnown RBP eCLIP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms