RNA–Protein interactions for RNA: ENST00000588352.5

GHDC-208, Transcript of GH3 domain containing, humanhuman

TSL 5

Gene GHDC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-208ENST00000588352 ADGRL1O94910 1474 aa26.94■■□□□ 1.9
GHDC-208ENST00000588352 FRMPD1Q5SYB0 1578 aa26.94■■□□□ 1.9
GHDC-208ENST00000588352 GPATCH8Q9UKJ3 1502 aaKnown RBP26.94■■□□□ 1.9
GHDC-208ENST00000588352 CDC42BPAQ5VT25 1732 aa26.9■■□□□ 1.9
GHDC-208ENST00000588352 NCOA2Q15596 1464 aa26.9■■□□□ 1.9
GHDC-208ENST00000588352 CCNB3Q8WWL7 1395 aa26.9■■□□□ 1.9
GHDC-208ENST00000588352 POGZQ7Z3K3 1410 aa26.9■■□□□ 1.9
GHDC-208ENST00000588352 SUPT6HQ7KZ85 1726 aaKnown RBP26.89■■□□□ 1.9
GHDC-208ENST00000588352 CDC42BPBQ9Y5S2 1711 aa26.89■■□□□ 1.9
GHDC-208ENST00000588352 ABCC1P33527 1531 aa26.87■■□□□ 1.89
GHDC-208ENST00000588352 ZMYM4Q5VZL5 1548 aa26.87■■□□□ 1.89
GHDC-208ENST00000588352 SCAPERQ9BY12 1400 aa26.87■■□□□ 1.89
GHDC-208ENST00000588352 RICTORQ6R327 1708 aa26.86■■□□□ 1.89
GHDC-208ENST00000588352 RAPGEF3O95398 923 aa26.85■■□□□ 1.89
GHDC-208ENST00000588352 ITSN2Q9NZM3 1697 aa26.85■■□□□ 1.89
GHDC-208ENST00000588352 APLP2Q06481 763 aa26.84■■□□□ 1.89
GHDC-208ENST00000588352 ZNF518AQ6AHZ1 1483 aa26.82■■□□□ 1.88
GHDC-208ENST00000588352 SAMD9LQ8IVG5 1584 aa26.81■■□□□ 1.88
GHDC-208ENST00000588352 KANK4Q5T7N3 995 aaPredicted RBP26.81■■□□□ 1.88
GHDC-208ENST00000588352 MAGI2Q86UL8 1455 aa26.8■■□□□ 1.88
GHDC-208ENST00000588352 PLEKHH2Q8IVE3 1493 aa26.8■■□□□ 1.88
GHDC-208ENST00000588352 ARHGEF40Q8TER5 1519 aa26.8■■□□□ 1.88
GHDC-208ENST00000588352 CFDP1Q9UEE9 299 aaPredicted RBP26.79■■□□□ 1.88
GHDC-208ENST00000588352 KDM5CP41229 1560 aa26.79■■□□□ 1.88
GHDC-208ENST00000588352 KIAA1107Q9UPP5 1409 aa26.77■■□□□ 1.88
GHDC-208ENST00000588352 ARHGEF12Q9NZN5 1544 aa26.76■■□□□ 1.87
GHDC-208ENST00000588352 SYCP2Q9BX26 1530 aa26.74■■□□□ 1.87
GHDC-208ENST00000588352 ZFYVE16Q7Z3T8 1539 aa26.73■■□□□ 1.87
GHDC-208ENST00000588352 TRAPPC8Q9Y2L5 1435 aa26.72■■□□□ 1.87
GHDC-208ENST00000588352 MYOM3Q5VTT5 1437 aa26.71■■□□□ 1.87
GHDC-208ENST00000588352 HECW2Q9P2P5 1572 aa26.69■■□□□ 1.86
GHDC-208ENST00000588352 ZNF777Q9ULD5 760 aaPredicted RBP26.69■■□□□ 1.86
GHDC-208ENST00000588352 MLH3Q9UHC1 1453 aa26.68■■□□□ 1.86
GHDC-208ENST00000588352 MIA2Q96PC5 1412 aa26.68■■□□□ 1.86
GHDC-208ENST00000588352 YEATS2Q9ULM3 1422 aa26.67■■□□□ 1.86
GHDC-208ENST00000588352 CAMSAP2Q08AD1 1489 aa26.67■■□□□ 1.86
GHDC-208ENST00000588352 AFAP1Q8N556 730 aa26.65■■□□□ 1.86
GHDC-208ENST00000588352 MBD5Q9P267 1494 aa26.65■■□□□ 1.86
GHDC-208ENST00000588352 ZNF644Q9H582 1327 aaPredicted RBP26.62■■□□□ 1.85
GHDC-208ENST00000588352 C9orf84Q5VXU9 1444 aa26.58■■□□□ 1.85
GHDC-208ENST00000588352 CCDC141Q6ZP82 1450 aa26.58■■□□□ 1.85
GHDC-208ENST00000588352 HNRNPMP52272 730 aaKnown RBP eCLIP26.58■■□□□ 1.85
GHDC-208ENST00000588352 ARHGEF5Q12774 1597 aa26.58■■□□□ 1.85
GHDC-208ENST00000588352 REREQ9P2R6 1566 aa26.58■■□□□ 1.85
GHDC-208ENST00000588352 INO80Q9ULG1 1556 aaPredicted RBP26.58■■□□□ 1.85
GHDC-208ENST00000588352 DIP2CQ9Y2E4 1556 aa26.58■■□□□ 1.85
GHDC-208ENST00000588352 ATP10AO60312 1499 aa26.57■■□□□ 1.84
GHDC-208ENST00000588352 FGD6Q6ZV73 1430 aa26.56■■□□□ 1.84
GHDC-208ENST00000588352 ABCA6Q8N139 1617 aa26.55■■□□□ 1.84
GHDC-208ENST00000588352 ATP7AQ04656 1500 aa26.55■■□□□ 1.84
GHDC-208ENST00000588352 SPAG9O60271 1321 aaKnown RBP26.54■■□□□ 1.84
GHDC-208ENST00000588352 RSPH4AQ5TD94 716 aa26.53■■□□□ 1.84
GHDC-208ENST00000588352 TCOF1Q13428 1488 aaKnown RBP26.53■■□□□ 1.84
GHDC-208ENST00000588352 KIDINS220Q9ULH0 1771 aa26.53■■□□□ 1.84
GHDC-208ENST00000588352 RTEL1-TNFRSF6BF6WH68 1400 aa26.51■■□□□ 1.83
GHDC-208ENST00000588352 KDM4FA0A1W2PPD8 638 aa26.51■■□□□ 1.83
GHDC-208ENST00000588352 PTPN23Q9H3S7 1636 aa26.5■■□□□ 1.83
GHDC-208ENST00000588352 MYT1LQ9UL68 1186 aa26.47■■□□□ 1.83
GHDC-208ENST00000588352 SIGLEC1Q9BZZ2 1709 aa26.47■■□□□ 1.83
GHDC-208ENST00000588352 AGLP35573 1532 aa26.46■■□□□ 1.83
GHDC-208ENST00000588352 BCORL1Q5H9F3 1711 aa26.45■■□□□ 1.82
GHDC-208ENST00000588352 MAST1Q9Y2H9 1570 aa26.44■■□□□ 1.82
GHDC-208ENST00000588352 ARID4BQ4LE39 1312 aaPredicted RBP26.43■■□□□ 1.82
GHDC-208ENST00000588352 PLXNC1O60486 1568 aa26.43■■□□□ 1.82
GHDC-208ENST00000588352 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
GHDC-208ENST00000588352 ADAMTSL3P82987 1691 aa26.42■■□□□ 1.82
GHDC-208ENST00000588352 A2MP01023 1474 aa26.39■■□□□ 1.82
GHDC-208ENST00000588352 DNMT1P26358 1616 aaKnown RBP26.38■■□□□ 1.81
GHDC-208ENST00000588352 ABCC5O15440 1437 aa26.37■■□□□ 1.81
GHDC-208ENST00000588352 ADGBQ8N7X0 1667 aa26.36■■□□□ 1.81
GHDC-208ENST00000588352 TSPY4P0CV99 314 aa26.36■■□□□ 1.81
GHDC-208ENST00000588352 TSPY10P0CW01 314 aa26.36■■□□□ 1.81
GHDC-208ENST00000588352 DAPK1P53355 1430 aa26.36■■□□□ 1.81
GHDC-208ENST00000588352 CROCC2H7BZ55 1655 aa26.34■■□□□ 1.81
GHDC-208ENST00000588352 MADDQ8WXG6 1647 aa26.34■■□□□ 1.81
GHDC-208ENST00000588352 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
GHDC-208ENST00000588352 DHX29Q7Z478 1369 aaKnown RBP26.3■■□□□ 1.8
GHDC-208ENST00000588352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.3■■□□□ 1.8
GHDC-208ENST00000588352 PTPRMP28827 1452 aa26.28■■□□□ 1.8
GHDC-208ENST00000588352 PPARGC1BQ86YN6 1023 aaKnown RBP26.27■■□□□ 1.8
GHDC-208ENST00000588352 RRBP1Q9P2E9 1410 aaKnown RBP26.26■■□□□ 1.79
GHDC-208ENST00000588352 MLECQ14165 292 aa26.25■■□□□ 1.79
GHDC-208ENST00000588352 FAM50AQ14320 339 aaKnown RBP26.25■■□□□ 1.79
GHDC-208ENST00000588352 ADGRL2O95490 1459 aa26.24■■□□□ 1.79
GHDC-208ENST00000588352 FER1L4A9Z1Z3 1794 aa26.23■■□□□ 1.79
GHDC-208ENST00000588352 RIMS1Q86UR5 1692 aaKnown RBP26.22■■□□□ 1.79
GHDC-208ENST00000588352 DUOX2Q9NRD8 1548 aa26.22■■□□□ 1.79
GHDC-208ENST00000588352 KIF15Q9NS87 1388 aa26.21■■□□□ 1.79
GHDC-208ENST00000588352 CNTLNQ9NXG0 1405 aa26.21■■□□□ 1.79
GHDC-208ENST00000588352 ANKRD30AQ9BXX3 1397 aa26.2■■□□□ 1.78
GHDC-208ENST00000588352 FAM135AQ9P2D6 1515 aa26.19■■□□□ 1.78
GHDC-208ENST00000588352 EIF2AK4Q9P2K8 1649 aaKnown RBP26.19■■□□□ 1.78
GHDC-208ENST00000588352 ERBINQ96RT1 1412 aa26.18■■□□□ 1.78
GHDC-208ENST00000588352 NCOA1Q15788 1441 aa26.17■■□□□ 1.78
GHDC-208ENST00000588352 PPP6R1Q9UPN7 881 aa26.14■■□□□ 1.78
GHDC-208ENST00000588352 RNF17Q9BXT8 1623 aaKnown RBP26.14■■□□□ 1.77
GHDC-208ENST00000588352 PTPRKQ15262 1439 aa26.14■■□□□ 1.77
GHDC-208ENST00000588352 ROCK1Q13464 1354 aa26.12■■□□□ 1.77
GHDC-208ENST00000588352 KIF3BO15066 747 aa26.11■■□□□ 1.77
GHDC-208ENST00000588352 MROH2AA6NES4 1674 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms