RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
CHMP1B-202ENST00000588284 ITGAEP38570 1179 aa15.72■□□□□ 0.11
CHMP1B-202ENST00000588284 KIF14Q15058 1648 aa15.71■□□□□ 0.11
CHMP1B-202ENST00000588284 KCNH8Q96L42 1107 aa15.7■□□□□ 0.1
CHMP1B-202ENST00000588284 TCOF1Q13428 1488 aaKnown RBP15.7■□□□□ 0.1
CHMP1B-202ENST00000588284 ZCCHC11Q5TAX3 1644 aaKnown RBP15.69■□□□□ 0.1
CHMP1B-202ENST00000588284 GPATCH8Q9UKJ3 1502 aaKnown RBP15.68■□□□□ 0.1
CHMP1B-202ENST00000588284 ABCC10Q5T3U5 1492 aa15.68■□□□□ 0.1
CHMP1B-202ENST00000588284 PTPN23Q9H3S7 1636 aa15.68■□□□□ 0.1
CHMP1B-202ENST00000588284 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
CHMP1B-202ENST00000588284 CYB5RLQ6IPT4 315 aa15.67■□□□□ 0.1
CHMP1B-202ENST00000588284 HRCP23327 699 aa15.66■□□□□ 0.1
CHMP1B-202ENST00000588284 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
CHMP1B-202ENST00000588284 ITSN2Q9NZM3 1697 aa15.65■□□□□ 0.1
CHMP1B-202ENST00000588284 RSPH4AQ5TD94 716 aa15.64■□□□□ 0.09
CHMP1B-202ENST00000588284 ZNF777Q9ULD5 760 aaPredicted RBP15.64■□□□□ 0.09
CHMP1B-202ENST00000588284 CCER1Q8TC90 406 aaPredicted RBP15.63■□□□□ 0.09
CHMP1B-202ENST00000588284 WDR7Q9Y4E6 1490 aa15.62■□□□□ 0.09
CHMP1B-202ENST00000588284 SETD5Q9C0A6 1442 aa15.61■□□□□ 0.09
CHMP1B-202ENST00000588284 EFCAB2Q5VUJ9 269 aa15.61■□□□□ 0.09
CHMP1B-202ENST00000588284 ACIN1Q9UKV3 1341 aaKnown RBP15.61■□□□□ 0.09
CHMP1B-202ENST00000588284 ASXL2Q76L83 1435 aa15.6■□□□□ 0.09
CHMP1B-202ENST00000588284 ZNF644Q9H582 1327 aaPredicted RBP15.6■□□□□ 0.09
CHMP1B-202ENST00000588284 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.59■□□□□ 0.09
CHMP1B-202ENST00000588284 PLCH2O75038 1416 aa15.59■□□□□ 0.09
CHMP1B-202ENST00000588284 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
CHMP1B-202ENST00000588284 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
CHMP1B-202ENST00000588284 TSPY4P0CV99 314 aa15.57■□□□□ 0.08
CHMP1B-202ENST00000588284 TSPY10P0CW01 314 aa15.57■□□□□ 0.08
CHMP1B-202ENST00000588284 CAMSAP2Q08AD1 1489 aa15.56■□□□□ 0.08
CHMP1B-202ENST00000588284 PLEKHH2Q8IVE3 1493 aa15.55■□□□□ 0.08
CHMP1B-202ENST00000588284 ABCC5O15440 1437 aa15.55■□□□□ 0.08
CHMP1B-202ENST00000588284 DAPK1P53355 1430 aa15.55■□□□□ 0.08
CHMP1B-202ENST00000588284 PTPRKQ15262 1439 aa15.55■□□□□ 0.08
CHMP1B-202ENST00000588284 ROCK1Q13464 1354 aa15.54■□□□□ 0.08
CHMP1B-202ENST00000588284 CHIC2Q9UKJ5 165 aa15.54■□□□□ 0.08
CHMP1B-202ENST00000588284 ARHGAP5Q13017 1502 aa15.53■□□□□ 0.08
CHMP1B-202ENST00000588284 HFM1A2PYH4 1435 aa15.53■□□□□ 0.08
CHMP1B-202ENST00000588284 AKNAQ7Z591 1439 aa15.53■□□□□ 0.08
CHMP1B-202ENST00000588284 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
CHMP1B-202ENST00000588284 PREX2Q70Z35 1606 aa15.53■□□□□ 0.08
CHMP1B-202ENST00000588284 ARAP3Q8WWN8 1544 aa15.53■□□□□ 0.08
CHMP1B-202ENST00000588284 KIAA1107Q9UPP5 1409 aa15.52■□□□□ 0.08
CHMP1B-202ENST00000588284 MYO5CQ9NQX4 1742 aa15.52■□□□□ 0.08
CHMP1B-202ENST00000588284 HNRNPMP52272 730 aaKnown RBP eCLIP15.52■□□□□ 0.08
CHMP1B-202ENST00000588284 DNMT1P26358 1616 aaKnown RBP15.52■□□□□ 0.08
CHMP1B-202ENST00000588284 TTC37Q6PGP7 1564 aa15.52■□□□□ 0.07
CHMP1B-202ENST00000588284 CLSPNQ9HAW4 1339 aa15.51■□□□□ 0.07
CHMP1B-202ENST00000588284 CDC42BPBQ9Y5S2 1711 aa15.51■□□□□ 0.07
CHMP1B-202ENST00000588284 MAPKBP1O60336 1514 aa15.5■□□□□ 0.07
CHMP1B-202ENST00000588284 RRP7BPQ9NSQ0 103 aa15.5■□□□□ 0.07
CHMP1B-202ENST00000588284 ABCA9Q8IUA7 1624 aa15.5■□□□□ 0.07
CHMP1B-202ENST00000588284 NAIPQ13075 1403 aa15.49■□□□□ 0.07
CHMP1B-202ENST00000588284 ANKRD30AQ9BXX3 1397 aa15.49■□□□□ 0.07
CHMP1B-202ENST00000588284 ARHGEF5Q12774 1597 aa15.48■□□□□ 0.07
CHMP1B-202ENST00000588284 MBD5Q9P267 1494 aa15.47■□□□□ 0.07
CHMP1B-202ENST00000588284 CD109Q6YHK3 1445 aa15.47■□□□□ 0.07
CHMP1B-202ENST00000588284 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.06
CHMP1B-202ENST00000588284 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.06
CHMP1B-202ENST00000588284 SAMD9LQ8IVG5 1584 aa15.45■□□□□ 0.06
CHMP1B-202ENST00000588284 NCOA1Q15788 1441 aa15.45■□□□□ 0.06
CHMP1B-202ENST00000588284 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
CHMP1B-202ENST00000588284 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
CHMP1B-202ENST00000588284 ADGRL2O95490 1459 aa15.45■□□□□ 0.06
CHMP1B-202ENST00000588284 FANCAO15360 1455 aa15.43■□□□□ 0.06
CHMP1B-202ENST00000588284 C9orf84Q5VXU9 1444 aa15.43■□□□□ 0.06
CHMP1B-202ENST00000588284 GLI2P10070 1586 aa15.41■□□□□ 0.06
CHMP1B-202ENST00000588284 FAM69CQ0P6D2 419 aa15.4■□□□□ 0.06
CHMP1B-202ENST00000588284 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
CHMP1B-202ENST00000588284 SYCP2Q9BX26 1530 aa15.39■□□□□ 0.05
CHMP1B-202ENST00000588284 CROCC2H7BZ55 1655 aa15.38■□□□□ 0.05
CHMP1B-202ENST00000588284 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
CHMP1B-202ENST00000588284 ADGBQ8N7X0 1667 aa15.38■□□□□ 0.05
CHMP1B-202ENST00000588284 SCAPERQ9BY12 1400 aa15.38■□□□□ 0.05
CHMP1B-202ENST00000588284 SPAG9O60271 1321 aaKnown RBP15.38■□□□□ 0.05
CHMP1B-202ENST00000588284 ABCC1P33527 1531 aa15.38■□□□□ 0.05
CHMP1B-202ENST00000588284 MAST1Q9Y2H9 1570 aa15.37■□□□□ 0.05
CHMP1B-202ENST00000588284 RTEL1-TNFRSF6BF6WH68 1400 aa15.37■□□□□ 0.05
CHMP1B-202ENST00000588284 ARHGEF12Q9NZN5 1544 aa15.37■□□□□ 0.05
CHMP1B-202ENST00000588284 CFAP74Q9C0B2 1584 aa15.36■□□□□ 0.05
CHMP1B-202ENST00000588284 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
CHMP1B-202ENST00000588284 NEO1Q92859 1461 aa15.36■□□□□ 0.05
CHMP1B-202ENST00000588284 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
CHMP1B-202ENST00000588284 TRAPPC8Q9Y2L5 1435 aa15.35■□□□□ 0.05
CHMP1B-202ENST00000588284 AFAP1Q8N556 730 aa15.35■□□□□ 0.05
CHMP1B-202ENST00000588284 KIF15Q9NS87 1388 aa15.35■□□□□ 0.05
CHMP1B-202ENST00000588284 MPHOSPH9Q99550 1183 aa15.32■□□□□ 0.04
CHMP1B-202ENST00000588284 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
CHMP1B-202ENST00000588284 MAP3K4Q9Y6R4 1608 aa15.31■□□□□ 0.04
CHMP1B-202ENST00000588284 DIP2BQ9P265 1576 aa15.3■□□□□ 0.04
CHMP1B-202ENST00000588284 TIMELESSQ9UNS1 1208 aa15.3■□□□□ 0.04
CHMP1B-202ENST00000588284 ZNF518AQ6AHZ1 1483 aa15.29■□□□□ 0.04
CHMP1B-202ENST00000588284 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
CHMP1B-202ENST00000588284 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
CHMP1B-202ENST00000588284 TEX14Q8IWB6 1497 aa15.28■□□□□ 0.04
CHMP1B-202ENST00000588284 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.04
CHMP1B-202ENST00000588284 KDM6BO15054 1643 aa15.27■□□□□ 0.03
CHMP1B-202ENST00000588284 NUP155O75694 1391 aa15.25■□□□□ 0.03
CHMP1B-202ENST00000588284 POGZQ7Z3K3 1410 aa15.25■□□□□ 0.03
CHMP1B-202ENST00000588284 ERBINQ96RT1 1412 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms