RNA–Protein interactions for RNA: ENST00000588216.5

TNPO2-210, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 3,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-210ENST00000588216 MIA2Q96PC5 1412 aa17.44■□□□□ 0.38
TNPO2-210ENST00000588216 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
TNPO2-210ENST00000588216 TCOF1Q13428 1488 aaKnown RBP17.41■□□□□ 0.38
TNPO2-210ENST00000588216 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
TNPO2-210ENST00000588216 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
TNPO2-210ENST00000588216 FOXD1Q16676 465 aa17.37■□□□□ 0.37
TNPO2-210ENST00000588216 ABCC5O15440 1437 aa17.37■□□□□ 0.37
TNPO2-210ENST00000588216 DAPK1P53355 1430 aa17.37■□□□□ 0.37
TNPO2-210ENST00000588216 HNRNPMP52272 730 aaKnown RBP eCLIP17.36■□□□□ 0.37
TNPO2-210ENST00000588216 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
TNPO2-210ENST00000588216 CAMSAP2Q08AD1 1489 aa17.34■□□□□ 0.37
TNPO2-210ENST00000588216 KDM6BO15054 1643 aa17.33■□□□□ 0.36
TNPO2-210ENST00000588216 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
TNPO2-210ENST00000588216 CLASP1Q7Z460 1538 aa17.32■□□□□ 0.36
TNPO2-210ENST00000588216 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
TNPO2-210ENST00000588216 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
TNPO2-210ENST00000588216 ABCC10Q5T3U5 1492 aa17.29■□□□□ 0.36
TNPO2-210ENST00000588216 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
TNPO2-210ENST00000588216 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
TNPO2-210ENST00000588216 TSPY4P0CV99 314 aa17.27■□□□□ 0.35
TNPO2-210ENST00000588216 TSPY10P0CW01 314 aa17.27■□□□□ 0.35
TNPO2-210ENST00000588216 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
TNPO2-210ENST00000588216 DNMT1P26358 1616 aaKnown RBP17.26■□□□□ 0.35
TNPO2-210ENST00000588216 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
TNPO2-210ENST00000588216 ADCY10Q96PN6 1610 aa17.25■□□□□ 0.35
TNPO2-210ENST00000588216 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
TNPO2-210ENST00000588216 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
TNPO2-210ENST00000588216 CDC42BPAQ5VT25 1732 aa17.24■□□□□ 0.35
TNPO2-210ENST00000588216 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
TNPO2-210ENST00000588216 NCOA1Q15788 1441 aa17.23■□□□□ 0.35
TNPO2-210ENST00000588216 ROCK1Q13464 1354 aa17.22■□□□□ 0.35
TNPO2-210ENST00000588216 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
TNPO2-210ENST00000588216 DENND4BO75064 1496 aaPredicted RBP17.19■□□□□ 0.34
TNPO2-210ENST00000588216 ANKRD30AQ9BXX3 1397 aa17.19■□□□□ 0.34
TNPO2-210ENST00000588216 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
TNPO2-210ENST00000588216 ARHGAP5Q13017 1502 aa17.18■□□□□ 0.34
TNPO2-210ENST00000588216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.18■□□□□ 0.344e-15■■□□□ 13.1
TNPO2-210ENST00000588216 TTC37Q6PGP7 1564 aa17.18■□□□□ 0.34
TNPO2-210ENST00000588216 C9orf84Q5VXU9 1444 aa17.17■□□□□ 0.34
TNPO2-210ENST00000588216 ZCCHC11Q5TAX3 1644 aaKnown RBP17.15■□□□□ 0.34
TNPO2-210ENST00000588216 ANKRD50Q9ULJ7 1429 aa17.14■□□□□ 0.33
TNPO2-210ENST00000588216 KDM5BQ9UGL1 1544 aa17.14■□□□□ 0.33
TNPO2-210ENST00000588216 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
TNPO2-210ENST00000588216 TIMELESSQ9UNS1 1208 aa17.13■□□□□ 0.33
TNPO2-210ENST00000588216 MBD5Q9P267 1494 aa17.13■□□□□ 0.33
TNPO2-210ENST00000588216 PKD2Q13563 968 aa17.12■□□□□ 0.33
TNPO2-210ENST00000588216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.338e-8■■□□□ 13.2
TNPO2-210ENST00000588216 SAMD9LQ8IVG5 1584 aa17.12■□□□□ 0.33
TNPO2-210ENST00000588216 KIF15Q9NS87 1388 aa17.12■□□□□ 0.33
TNPO2-210ENST00000588216 EFCAB2Q5VUJ9 269 aa17.12■□□□□ 0.33
TNPO2-210ENST00000588216 UHRF1BP1LA0JNW5 1464 aa17.11■□□□□ 0.33
TNPO2-210ENST00000588216 NUP155O75694 1391 aa17.11■□□□□ 0.33
TNPO2-210ENST00000588216 NPM1P06748 294 aaKnown RBP eCLIP17.11■□□□□ 0.33
TNPO2-210ENST00000588216 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
TNPO2-210ENST00000588216 L3MBTL2Q969R5 705 aa17.1■□□□□ 0.33
TNPO2-210ENST00000588216 AFAP1Q8N556 730 aa17.09■□□□□ 0.33
TNPO2-210ENST00000588216 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
TNPO2-210ENST00000588216 PREX2Q70Z35 1606 aa17.09■□□□□ 0.33
TNPO2-210ENST00000588216 ADGRL2O95490 1459 aa17.08■□□□□ 0.32
TNPO2-210ENST00000588216 CCDC141Q6ZP82 1450 aa17.07■□□□□ 0.32
TNPO2-210ENST00000588216 PLCH2O75038 1416 aa17.07■□□□□ 0.32
TNPO2-210ENST00000588216 ANKRD30BQ9BXX2 1392 aa17.06■□□□□ 0.32
TNPO2-210ENST00000588216 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
TNPO2-210ENST00000588216 DDX10Q13206 875 aaKnown RBP17.06■□□□□ 0.32
TNPO2-210ENST00000588216 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
TNPO2-210ENST00000588216 CROCC2H7BZ55 1655 aa17.06■□□□□ 0.32
TNPO2-210ENST00000588216 PZPP20742 1482 aa17.05■□□□□ 0.32
TNPO2-210ENST00000588216 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
TNPO2-210ENST00000588216 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
TNPO2-210ENST00000588216 ZNF326Q5BKZ1 582 aaKnown RBP17.04■□□□□ 0.32
TNPO2-210ENST00000588216 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
TNPO2-210ENST00000588216 WDR7Q9Y4E6 1490 aa17.03■□□□□ 0.32
TNPO2-210ENST00000588216 MYO5CQ9NQX4 1742 aa17.02■□□□□ 0.32
TNPO2-210ENST00000588216 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.32
TNPO2-210ENST00000588216 SHANK2Q9UPX8 1470 aa17.02■□□□□ 0.31
TNPO2-210ENST00000588216 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
TNPO2-210ENST00000588216 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
TNPO2-210ENST00000588216 SPAG9O60271 1321 aaKnown RBP16.98■□□□□ 0.31
TNPO2-210ENST00000588216 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
TNPO2-210ENST00000588216 PLEKHH2Q8IVE3 1493 aa16.97■□□□□ 0.31
TNPO2-210ENST00000588216 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
TNPO2-210ENST00000588216 RPRD2Q5VT52 1461 aaKnown RBP16.95■□□□□ 0.3
TNPO2-210ENST00000588216 FANCAO15360 1455 aa16.95■□□□□ 0.3
TNPO2-210ENST00000588216 HSPA5P11021 654 aaKnown RBP16.93■□□□□ 0.3
TNPO2-210ENST00000588216 RGL3Q3MIN7 710 aa16.93■□□□□ 0.3
TNPO2-210ENST00000588216 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
TNPO2-210ENST00000588216 PRKCSHP14314 528 aaPredicted RBP16.91■□□□□ 0.3
TNPO2-210ENST00000588216 ABCC1P33527 1531 aa16.9■□□□□ 0.3
TNPO2-210ENST00000588216 EIF4G2P78344 907 aaKnown RBP eCLIP16.89■□□□□ 0.29
TNPO2-210ENST00000588216 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
TNPO2-210ENST00000588216 DCAF11Q8TEB1 546 aa16.88■□□□□ 0.29
TNPO2-210ENST00000588216 CD109Q6YHK3 1445 aa16.87■□□□□ 0.29
TNPO2-210ENST00000588216 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
TNPO2-210ENST00000588216 TEX14Q8IWB6 1497 aa16.87■□□□□ 0.29
TNPO2-210ENST00000588216 FAM135AQ9P2D6 1515 aa16.87■□□□□ 0.29
TNPO2-210ENST00000588216 KIF3BO15066 747 aa16.87■□□□□ 0.29
TNPO2-210ENST00000588216 RAPGEF3O95398 923 aa16.84■□□□□ 0.29
TNPO2-210ENST00000588216 ABCA9Q8IUA7 1624 aa16.84■□□□□ 0.29
TNPO2-210ENST00000588216 MAST1Q9Y2H9 1570 aa16.83■□□□□ 0.29
TNPO2-210ENST00000588216 C11orf95C9JLR9 678 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms