RNA–Protein interactions for RNA: ENST00000588195.5

PCSK4-207, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 1,806 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-207ENST00000588195 ROCK1Q13464 1354 aa29.88■■■□□ 2.37
PCSK4-207ENST00000588195 CROCC2H7BZ55 1655 aa29.88■■■□□ 2.37
PCSK4-207ENST00000588195 ZNF644Q9H582 1327 aaPredicted RBP29.88■■■□□ 2.37
PCSK4-207ENST00000588195 RRP7BPQ9NSQ0 103 aa29.87■■■□□ 2.37
PCSK4-207ENST00000588195 ABCC2Q92887 1545 aa29.85■■■□□ 2.37
PCSK4-207ENST00000588195 ADGBQ8N7X0 1667 aa29.85■■■□□ 2.37
PCSK4-207ENST00000588195 CFDP1Q9UEE9 299 aaPredicted RBP29.84■■■□□ 2.37
PCSK4-207ENST00000588195 SIN3AQ96ST3 1273 aa29.8■■■□□ 2.36
PCSK4-207ENST00000588195 TIMELESSQ9UNS1 1208 aa29.75■■■□□ 2.35
PCSK4-207ENST00000588195 PREX2Q70Z35 1606 aa29.74■■■□□ 2.35
PCSK4-207ENST00000588195 CDC42BPBQ9Y5S2 1711 aa29.73■■■□□ 2.35
PCSK4-207ENST00000588195 NEUROD1Q13562 356 aa29.72■■■□□ 2.35
PCSK4-207ENST00000588195 ADGRL2O95490 1459 aa29.72■■■□□ 2.35
PCSK4-207ENST00000588195 UHRF1BP1LA0JNW5 1464 aa29.71■■■□□ 2.35
PCSK4-207ENST00000588195 DENND4BO75064 1496 aaPredicted RBP29.71■■■□□ 2.35
PCSK4-207ENST00000588195 ZCCHC11Q5TAX3 1644 aaKnown RBP29.69■■■□□ 2.34
PCSK4-207ENST00000588195 ZNF777Q9ULD5 760 aaPredicted RBP29.68■■■□□ 2.34
PCSK4-207ENST00000588195 ACIN1Q9UKV3 1341 aaKnown RBP29.66■■■□□ 2.34
PCSK4-207ENST00000588195 TTC37Q6PGP7 1564 aa29.66■■■□□ 2.34
PCSK4-207ENST00000588195 SHANK2Q9UPX8 1470 aa29.66■■■□□ 2.34
PCSK4-207ENST00000588195 NCOA1Q15788 1441 aa29.65■■■□□ 2.34
PCSK4-207ENST00000588195 ARHGEF5Q12774 1597 aa29.64■■■□□ 2.34
PCSK4-207ENST00000588195 SAMD9LQ8IVG5 1584 aa29.63■■■□□ 2.33
PCSK4-207ENST00000588195 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.63■■■□□ 2.33
PCSK4-207ENST00000588195 KDM5BQ9UGL1 1544 aa29.62■■■□□ 2.33
PCSK4-207ENST00000588195 TRIM52Q96A61 297 aa29.61■■■□□ 2.33
PCSK4-207ENST00000588195 MYO5CQ9NQX4 1742 aa29.61■■■□□ 2.33
PCSK4-207ENST00000588195 ANKRD30AQ9BXX3 1397 aa29.57■■■□□ 2.32
PCSK4-207ENST00000588195 TONSLQ96HA7 1378 aa29.56■■■□□ 2.32
PCSK4-207ENST00000588195 MPHOSPH9Q99550 1183 aa29.55■■■□□ 2.32
PCSK4-207ENST00000588195 MBD5Q9P267 1494 aa29.55■■■□□ 2.32
PCSK4-207ENST00000588195 C9orf84Q5VXU9 1444 aa29.55■■■□□ 2.32
PCSK4-207ENST00000588195 PPP1R15AO75807 674 aaPredicted RBP29.54■■■□□ 2.32
PCSK4-207ENST00000588195 ARHGAP5Q13017 1502 aa29.51■■■□□ 2.31
PCSK4-207ENST00000588195 CCDC141Q6ZP82 1450 aa29.49■■■□□ 2.31
PCSK4-207ENST00000588195 PZPP20742 1482 aa29.47■■■□□ 2.31
PCSK4-207ENST00000588195 SYCP2Q9BX26 1530 aa29.46■■■□□ 2.31
PCSK4-207ENST00000588195 ANKRD50Q9ULJ7 1429 aa29.45■■■□□ 2.31
PCSK4-207ENST00000588195 HNRNPMP52272 730 aaKnown RBP eCLIP29.44■■■□□ 2.3
PCSK4-207ENST00000588195 MAST1Q9Y2H9 1570 aa29.43■■■□□ 2.3
PCSK4-207ENST00000588195 TSPY4P0CV99 314 aa29.41■■■□□ 2.3
PCSK4-207ENST00000588195 TSPY10P0CW01 314 aa29.41■■■□□ 2.3
PCSK4-207ENST00000588195 ANKRD30BQ9BXX2 1392 aa29.4■■■□□ 2.3
PCSK4-207ENST00000588195 PLEKHH2Q8IVE3 1493 aa29.4■■■□□ 2.3
PCSK4-207ENST00000588195 RSPH4AQ5TD94 716 aa29.4■■■□□ 2.3
PCSK4-207ENST00000588195 MIER1Q8N108 512 aa29.38■■■□□ 2.29
PCSK4-207ENST00000588195 PLCH2O75038 1416 aa29.37■■■□□ 2.29
PCSK4-207ENST00000588195 KIAA1107Q9UPP5 1409 aa29.37■■■□□ 2.29
PCSK4-207ENST00000588195 KCNH8Q96L42 1107 aa29.37■■■□□ 2.29
PCSK4-207ENST00000588195 SLC4A1APQ9BWU0 796 aaKnown RBP29.37■■■□□ 2.29
PCSK4-207ENST00000588195 KDM5DQ9BY66 1539 aa29.36■■■□□ 2.29
PCSK4-207ENST00000588195 KIF15Q9NS87 1388 aa29.36■■■□□ 2.29
PCSK4-207ENST00000588195 FOXD1Q16676 465 aa29.36■■■□□ 2.29
PCSK4-207ENST00000588195 RPRD2Q5VT52 1461 aaKnown RBP29.35■■■□□ 2.29
PCSK4-207ENST00000588195 OSCARQ8IYS5 282 aa29.34■■■□□ 2.29
PCSK4-207ENST00000588195 WDR7Q9Y4E6 1490 aa29.33■■■□□ 2.29
PCSK4-207ENST00000588195 PLXNC1O60486 1568 aa29.32■■■□□ 2.28
PCSK4-207ENST00000588195 ARAP3Q8WWN8 1544 aa29.32■■■□□ 2.28
PCSK4-207ENST00000588195 ABCC1P33527 1531 aa29.3■■■□□ 2.28
PCSK4-207ENST00000588195 ARHGEF12Q9NZN5 1544 aa29.29■■■□□ 2.28
PCSK4-207ENST00000588195 TEX14Q8IWB6 1497 aa29.27■■■□□ 2.28
PCSK4-207ENST00000588195 ABCA9Q8IUA7 1624 aa29.26■■■□□ 2.27
PCSK4-207ENST00000588195 EFCAB2Q5VUJ9 269 aa29.23■■■□□ 2.27
PCSK4-207ENST00000588195 NUP155O75694 1391 aa29.22■■■□□ 2.27
PCSK4-207ENST00000588195 UNC13BO14795 1591 aa29.21■■■□□ 2.27
PCSK4-207ENST00000588195 L3MBTL2Q969R5 705 aa29.19■■■□□ 2.26
PCSK4-207ENST00000588195 PKD2Q13563 968 aa29.18■■■□□ 2.26
PCSK4-207ENST00000588195 ASXL2Q76L83 1435 aa29.17■■■□□ 2.26
PCSK4-207ENST00000588195 DUOX2Q9NRD8 1548 aa29.15■■■□□ 2.26
PCSK4-207ENST00000588195 FAM135AQ9P2D6 1515 aa29.14■■■□□ 2.26
PCSK4-207ENST00000588195 TRAPPC8Q9Y2L5 1435 aa29.13■■■□□ 2.25
PCSK4-207ENST00000588195 HIRIP3Q9BW71 556 aaPredicted RBP29.1■■■□□ 2.25
PCSK4-207ENST00000588195 IQGAP3Q86VI3 1631 aa29.09■■■□□ 2.25
PCSK4-207ENST00000588195 ERBINQ96RT1 1412 aa29.09■■■□□ 2.25
PCSK4-207ENST00000588195 FANCAO15360 1455 aa29.08■■■□□ 2.25
PCSK4-207ENST00000588195 ZFYVE16Q7Z3T8 1539 aa29.06■■■□□ 2.24
PCSK4-207ENST00000588195 MAGI2Q86UL8 1455 aa29.06■■■□□ 2.24
PCSK4-207ENST00000588195 CENPBP07199 599 aaPredicted RBP29.05■■■□□ 2.24
PCSK4-207ENST00000588195 RTEL1-TNFRSF6BF6WH68 1400 aa29.04■■■□□ 2.24
PCSK4-207ENST00000588195 INO80Q9ULG1 1556 aaPredicted RBP29.02■■■□□ 2.24
PCSK4-207ENST00000588195 DDX10Q13206 875 aaKnown RBP29.01■■■□□ 2.24
PCSK4-207ENST00000588195 NBPF8Q3BBV2 869 aa29.01■■■□□ 2.23
PCSK4-207ENST00000588195 NPM1P06748 294 aaKnown RBP eCLIP28.99■■■□□ 2.23
PCSK4-207ENST00000588195 ADGRL1O94910 1474 aa28.98■■■□□ 2.23
PCSK4-207ENST00000588195 SPAG9O60271 1321 aaKnown RBP28.97■■■□□ 2.23
PCSK4-207ENST00000588195 ATP7AQ04656 1500 aa28.96■■■□□ 2.23
PCSK4-207ENST00000588195 HSPA5P11021 654 aaKnown RBP28.96■■■□□ 2.23
PCSK4-207ENST00000588195 YTHDC1Q96MU7 727 aaKnown RBP28.95■■■□□ 2.23
PCSK4-207ENST00000588195 EIF4G2P78344 907 aaKnown RBP eCLIP28.94■■■□□ 2.22
PCSK4-207ENST00000588195 AFAP1Q8N556 730 aa28.94■■■□□ 2.22
PCSK4-207ENST00000588195 CFAP74Q9C0B2 1584 aa28.93■■■□□ 2.22
PCSK4-207ENST00000588195 DEPDC5O75140 1603 aa28.92■■■□□ 2.22
PCSK4-207ENST00000588195 SCAPERQ9BY12 1400 aa28.91■■■□□ 2.22
PCSK4-207ENST00000588195 POLR1AO95602 1720 aaPredicted RBP28.9■■■□□ 2.22
PCSK4-207ENST00000588195 UHRF1BP1Q6BDS2 1440 aa28.89■■■□□ 2.22
PCSK4-207ENST00000588195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.87■■■□□ 2.21
PCSK4-207ENST00000588195 PLA2R1Q13018 1463 aa28.86■■■□□ 2.21
PCSK4-207ENST00000588195 SPATA31E1Q6ZUB1 1445 aa28.85■■■□□ 2.21
PCSK4-207ENST00000588195 EIF2AK4Q9P2K8 1649 aaKnown RBP28.85■■■□□ 2.21
PCSK4-207ENST00000588195 KIDINS220Q9ULH0 1771 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms