RNA–Protein interactions for RNA: ENST00000588170.5

GRN-212, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-212ENST00000588170 ARHGAP5Q13017 1502 aa23.75■■□□□ 1.39
GRN-212ENST00000588170 GPATCH8Q9UKJ3 1502 aaKnown RBP23.75■■□□□ 1.39
GRN-212ENST00000588170 CDC42BPAQ5VT25 1732 aa23.75■■□□□ 1.39
GRN-212ENST00000588170 APLP2Q06481 763 aa23.73■■□□□ 1.39
GRN-212ENST00000588170 CCNB3Q8WWL7 1395 aa23.73■■□□□ 1.39
GRN-212ENST00000588170 CFAP74Q9C0B2 1584 aa23.73■■□□□ 1.39
GRN-212ENST00000588170 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
GRN-212ENST00000588170 SCAPERQ9BY12 1400 aa23.71■■□□□ 1.39
GRN-212ENST00000588170 ADGRL1O94910 1474 aa23.7■■□□□ 1.38
GRN-212ENST00000588170 ZNF777Q9ULD5 760 aaPredicted RBP23.7■■□□□ 1.38
GRN-212ENST00000588170 DENND4BO75064 1496 aaPredicted RBP23.69■■□□□ 1.38
GRN-212ENST00000588170 NCOA2Q15596 1464 aa23.69■■□□□ 1.38
GRN-212ENST00000588170 CFDP1Q9UEE9 299 aaPredicted RBP23.68■■□□□ 1.38
GRN-212ENST00000588170 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
GRN-212ENST00000588170 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
GRN-212ENST00000588170 RICTORQ6R327 1708 aa23.65■■□□□ 1.38
GRN-212ENST00000588170 ZNF644Q9H582 1327 aaPredicted RBP23.64■■□□□ 1.38
GRN-212ENST00000588170 ARHGEF12Q9NZN5 1544 aa23.64■■□□□ 1.37
GRN-212ENST00000588170 AFAP1Q8N556 730 aa23.63■■□□□ 1.37
GRN-212ENST00000588170 POGZQ7Z3K3 1410 aa23.61■■□□□ 1.37
GRN-212ENST00000588170 HNRNPMP52272 730 aaKnown RBP eCLIP23.61■■□□□ 1.37
GRN-212ENST00000588170 SAMD9LQ8IVG5 1584 aa23.61■■□□□ 1.37
GRN-212ENST00000588170 ABCC1P33527 1531 aa23.59■■□□□ 1.37
GRN-212ENST00000588170 TRAPPC8Q9Y2L5 1435 aa23.59■■□□□ 1.37
GRN-212ENST00000588170 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
GRN-212ENST00000588170 ITSN2Q9NZM3 1697 aa23.56■■□□□ 1.36
GRN-212ENST00000588170 SYCP2Q9BX26 1530 aa23.54■■□□□ 1.36
GRN-212ENST00000588170 YEATS2Q9ULM3 1422 aa23.53■■□□□ 1.36
GRN-212ENST00000588170 ZNF518AQ6AHZ1 1483 aa23.53■■□□□ 1.36
GRN-212ENST00000588170 ZMYM4Q5VZL5 1548 aa23.53■■□□□ 1.36
GRN-212ENST00000588170 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
GRN-212ENST00000588170 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
GRN-212ENST00000588170 PLEKHH2Q8IVE3 1493 aa23.49■■□□□ 1.35
GRN-212ENST00000588170 KDM5CP41229 1560 aa23.49■■□□□ 1.35
GRN-212ENST00000588170 KDM4FA0A1W2PPD8 638 aa23.49■■□□□ 1.35
GRN-212ENST00000588170 MYT1LQ9UL68 1186 aa23.49■■□□□ 1.35
GRN-212ENST00000588170 CAMSAP2Q08AD1 1489 aa23.48■■□□□ 1.35
GRN-212ENST00000588170 MAGI2Q86UL8 1455 aa23.48■■□□□ 1.35
GRN-212ENST00000588170 MBD5Q9P267 1494 aa23.48■■□□□ 1.35
GRN-212ENST00000588170 ZFYVE16Q7Z3T8 1539 aa23.48■■□□□ 1.35
GRN-212ENST00000588170 ARHGEF40Q8TER5 1519 aa23.45■■□□□ 1.34
GRN-212ENST00000588170 MLH3Q9UHC1 1453 aa23.43■■□□□ 1.34
GRN-212ENST00000588170 MIA2Q96PC5 1412 aa23.43■■□□□ 1.34
GRN-212ENST00000588170 SPAG9O60271 1321 aaKnown RBP23.43■■□□□ 1.34
GRN-212ENST00000588170 HECW2Q9P2P5 1572 aa23.42■■□□□ 1.34
GRN-212ENST00000588170 ARID4BQ4LE39 1312 aaPredicted RBP23.41■■□□□ 1.34
GRN-212ENST00000588170 ATP10AO60312 1499 aa23.41■■□□□ 1.34
GRN-212ENST00000588170 KIDINS220Q9ULH0 1771 aa23.4■■□□□ 1.34
GRN-212ENST00000588170 SIGLEC1Q9BZZ2 1709 aa23.4■■□□□ 1.34
GRN-212ENST00000588170 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
GRN-212ENST00000588170 ABCA6Q8N139 1617 aa23.37■■□□□ 1.33
GRN-212ENST00000588170 DIP2CQ9Y2E4 1556 aa23.37■■□□□ 1.33
GRN-212ENST00000588170 RSPH4AQ5TD94 716 aa23.36■■□□□ 1.33
GRN-212ENST00000588170 PTPN23Q9H3S7 1636 aa23.36■■□□□ 1.33
GRN-212ENST00000588170 CCDC141Q6ZP82 1450 aa23.35■■□□□ 1.33
GRN-212ENST00000588170 C9orf84Q5VXU9 1444 aa23.34■■□□□ 1.33
GRN-212ENST00000588170 ATP7AQ04656 1500 aa23.33■■□□□ 1.33
GRN-212ENST00000588170 ARHGEF5Q12774 1597 aa23.33■■□□□ 1.33
GRN-212ENST00000588170 INO80Q9ULG1 1556 aaPredicted RBP23.32■■□□□ 1.32
GRN-212ENST00000588170 TCOF1Q13428 1488 aaKnown RBP23.31■■□□□ 1.32
GRN-212ENST00000588170 MLECQ14165 292 aa23.31■■□□□ 1.32
GRN-212ENST00000588170 TSPY4P0CV99 314 aa23.3■■□□□ 1.32
GRN-212ENST00000588170 TSPY10P0CW01 314 aa23.3■■□□□ 1.32
GRN-212ENST00000588170 RTEL1-TNFRSF6BF6WH68 1400 aa23.29■■□□□ 1.32
GRN-212ENST00000588170 FAM50AQ14320 339 aaKnown RBP23.29■■□□□ 1.32
GRN-212ENST00000588170 BCORL1Q5H9F3 1711 aa23.28■■□□□ 1.32
GRN-212ENST00000588170 ABCC5O15440 1437 aa23.27■■□□□ 1.32
GRN-212ENST00000588170 REREQ9P2R6 1566 aa23.25■■□□□ 1.31
GRN-212ENST00000588170 ADAMTSL3P82987 1691 aa23.25■■□□□ 1.31
GRN-212ENST00000588170 DAPK1P53355 1430 aa23.23■■□□□ 1.31
GRN-212ENST00000588170 A2MP01023 1474 aa23.23■■□□□ 1.31
GRN-212ENST00000588170 CHIC2Q9UKJ5 165 aa23.22■■□□□ 1.31
GRN-212ENST00000588170 DNMT1P26358 1616 aaKnown RBP23.2■■□□□ 1.3
GRN-212ENST00000588170 MAST1Q9Y2H9 1570 aa23.2■■□□□ 1.3
GRN-212ENST00000588170 AGLP35573 1532 aa23.2■■□□□ 1.3
GRN-212ENST00000588170 ADGBQ8N7X0 1667 aa23.19■■□□□ 1.3
GRN-212ENST00000588170 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
GRN-212ENST00000588170 DHX29Q7Z478 1369 aaKnown RBP23.19■■□□□ 1.3
GRN-212ENST00000588170 PLXNC1O60486 1568 aa23.18■■□□□ 1.3
GRN-212ENST00000588170 CROCC2H7BZ55 1655 aa23.17■■□□□ 1.3
GRN-212ENST00000588170 RRP7BPQ9NSQ0 103 aa23.16■■□□□ 1.3
GRN-212ENST00000588170 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.29
GRN-212ENST00000588170 PTPRKQ15262 1439 aa23.14■■□□□ 1.29
GRN-212ENST00000588170 PTPRMP28827 1452 aa23.13■■□□□ 1.29
GRN-212ENST00000588170 GGT6Q6P531 493 aa23.13■■□□□ 1.29
GRN-212ENST00000588170 RIMS1Q86UR5 1692 aaKnown RBP23.13■■□□□ 1.29
GRN-212ENST00000588170 KIF3BO15066 747 aa23.12■■□□□ 1.29
GRN-212ENST00000588170 ITGAEP38570 1179 aa23.12■■□□□ 1.29
GRN-212ENST00000588170 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
GRN-212ENST00000588170 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
GRN-212ENST00000588170 FER1L4A9Z1Z3 1794 aa23.1■■□□□ 1.29
GRN-212ENST00000588170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.09■■□□□ 1.294e-11■■■■■ 30.2
GRN-212ENST00000588170 KIF15Q9NS87 1388 aa23.09■■□□□ 1.29
GRN-212ENST00000588170 CEBPAP49715 358 aaPredicted RBP23.08■■□□□ 1.29
GRN-212ENST00000588170 NCOA1Q15788 1441 aa23.08■■□□□ 1.28
GRN-212ENST00000588170 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
GRN-212ENST00000588170 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
GRN-212ENST00000588170 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
GRN-212ENST00000588170 ADGRL2O95490 1459 aa23.04■■□□□ 1.28
GRN-212ENST00000588170 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms