RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 FER1L4A9Z1Z3 1794 aa24.1■■□□□ 1.45
KDM4B-204ENST00000588166 MYO5CQ9NQX4 1742 aa24.1■■□□□ 1.45
KDM4B-204ENST00000588166 FMN1Q68DA7 1419 aa24.09■■□□□ 1.45
KDM4B-204ENST00000588166 KIF14Q15058 1648 aa24.08■■□□□ 1.45
KDM4B-204ENST00000588166 HSPA2P54652 639 aa24.07■■□□□ 1.44
KDM4B-204ENST00000588166 ARHGEF12Q9NZN5 1544 aa24.06■■□□□ 1.44
KDM4B-204ENST00000588166 ATP10AO60312 1499 aa24.05■■□□□ 1.44
KDM4B-204ENST00000588166 LRRIQ1Q96JM4 1722 aa24.04■■□□□ 1.44
KDM4B-204ENST00000588166 C9orf84Q5VXU9 1444 aa24.02■■□□□ 1.44
KDM4B-204ENST00000588166 UBTFP17480 764 aaKnown RBP24.01■■□□□ 1.43
KDM4B-204ENST00000588166 MLECQ14165 292 aa24.01■■□□□ 1.43
KDM4B-204ENST00000588166 EFCAB2Q5VUJ9 269 aa24.01■■□□□ 1.43
KDM4B-204ENST00000588166 TROQ12816 1431 aaPredicted RBP24.01■■□□□ 1.43
KDM4B-204ENST00000588166 KDM5CP41229 1560 aa24■■□□□ 1.43
KDM4B-204ENST00000588166 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
KDM4B-204ENST00000588166 EHMT2Q96KQ7 1210 aa23.99■■□□□ 1.43
KDM4B-204ENST00000588166 ATP1B4Q9UN42 357 aaPredicted RBP23.98■■□□□ 1.43
KDM4B-204ENST00000588166 ZNF518AQ6AHZ1 1483 aa23.98■■□□□ 1.43
KDM4B-204ENST00000588166 CDK11AQ9UQ88 783 aaPredicted RBP23.97■■□□□ 1.43
KDM4B-204ENST00000588166 ARHGAP5Q13017 1502 aa23.95■■□□□ 1.43
KDM4B-204ENST00000588166 PREX1Q8TCU6 1659 aa23.95■■□□□ 1.42
KDM4B-204ENST00000588166 CDC42BPBQ9Y5S2 1711 aa23.94■■□□□ 1.42
KDM4B-204ENST00000588166 DIP2CQ9Y2E4 1556 aa23.92■■□□□ 1.42
KDM4B-204ENST00000588166 AFAP1Q8N556 730 aa23.92■■□□□ 1.42
KDM4B-204ENST00000588166 REREQ9P2R6 1566 aa23.91■■□□□ 1.42
KDM4B-204ENST00000588166 CLIP1P30622 1438 aa23.91■■□□□ 1.42
KDM4B-204ENST00000588166 ABCA6Q8N139 1617 aa23.88■■□□□ 1.41
KDM4B-204ENST00000588166 CEBPAP49715 358 aaPredicted RBP23.88■■□□□ 1.41
KDM4B-204ENST00000588166 PREX2Q70Z35 1606 aa23.88■■□□□ 1.41
KDM4B-204ENST00000588166 MLH3Q9UHC1 1453 aa23.87■■□□□ 1.41
KDM4B-204ENST00000588166 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
KDM4B-204ENST00000588166 ABCC1P33527 1531 aa23.86■■□□□ 1.41
KDM4B-204ENST00000588166 CERKQ8TCT0 537 aa23.86■■□□□ 1.41
KDM4B-204ENST00000588166 SETD1BQ9UPS6 1966 aaKnown RBP23.85■■□□□ 1.41
KDM4B-204ENST00000588166 CASKIN1Q8WXD9 1431 aa23.84■■□□□ 1.41
KDM4B-204ENST00000588166 TRAPPC8Q9Y2L5 1435 aa23.84■■□□□ 1.41
KDM4B-204ENST00000588166 ITSN2Q9NZM3 1697 aa23.83■■□□□ 1.41
KDM4B-204ENST00000588166 CCDC18Q5T9S5 1454 aa23.82■■□□□ 1.4
KDM4B-204ENST00000588166 AGLP35573 1532 aa23.82■■□□□ 1.4
KDM4B-204ENST00000588166 C3P01024 1663 aa23.81■■□□□ 1.4
KDM4B-204ENST00000588166 CDC42BPAQ5VT25 1732 aa23.81■■□□□ 1.4
KDM4B-204ENST00000588166 KIDINS220Q9ULH0 1771 aa23.79■■□□□ 1.4
KDM4B-204ENST00000588166 UHRF1BP1Q6BDS2 1440 aa23.78■■□□□ 1.4
KDM4B-204ENST00000588166 MYT1LQ9UL68 1186 aa23.73■■□□□ 1.39
KDM4B-204ENST00000588166 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
KDM4B-204ENST00000588166 SAMD9LQ8IVG5 1584 aa23.71■■□□□ 1.39
KDM4B-204ENST00000588166 DMRT2Q9Y5R5 561 aa23.7■■□□□ 1.38
KDM4B-204ENST00000588166 GPATCH8Q9UKJ3 1502 aaKnown RBP23.67■■□□□ 1.38
KDM4B-204ENST00000588166 PTPRTO14522 1441 aa23.67■■□□□ 1.38
KDM4B-204ENST00000588166 SYCP2Q9BX26 1530 aa23.66■■□□□ 1.38
KDM4B-204ENST00000588166 CNTLNQ9NXG0 1405 aa23.66■■□□□ 1.38
KDM4B-204ENST00000588166 MROH2AA6NES4 1674 aa23.64■■□□□ 1.38
KDM4B-204ENST00000588166 NCOA1Q15788 1441 aa23.61■■□□□ 1.37
KDM4B-204ENST00000588166 LTBP4Q8N2S1 1624 aa23.61■■□□□ 1.37
KDM4B-204ENST00000588166 PLXNC1O60486 1568 aa23.61■■□□□ 1.37
KDM4B-204ENST00000588166 ESF1Q9H501 851 aaKnown RBP23.6■■□□□ 1.37
KDM4B-204ENST00000588166 INO80Q9ULG1 1556 aaPredicted RBP23.6■■□□□ 1.37
KDM4B-204ENST00000588166 NPATQ14207 1427 aa23.59■■□□□ 1.37
KDM4B-204ENST00000588166 KIAA1107Q9UPP5 1409 aa23.59■■□□□ 1.37
KDM4B-204ENST00000588166 SUPT6HQ7KZ85 1726 aaKnown RBP23.59■■□□□ 1.37
KDM4B-204ENST00000588166 ATP7AQ04656 1500 aa23.59■■□□□ 1.37
KDM4B-204ENST00000588166 ZNF777Q9ULD5 760 aaPredicted RBP23.58■■□□□ 1.37
KDM4B-204ENST00000588166 HNRNPMP52272 730 aaKnown RBP eCLIP23.57■■□□□ 1.36
KDM4B-204ENST00000588166 SPAG9O60271 1321 aaKnown RBP23.57■■□□□ 1.36
KDM4B-204ENST00000588166 ZMYM3Q14202 1370 aa23.55■■□□□ 1.36
KDM4B-204ENST00000588166 CAMSAP1Q5T5Y3 1602 aa23.54■■□□□ 1.36
KDM4B-204ENST00000588166 PLEKHH2Q8IVE3 1493 aa23.54■■□□□ 1.36
KDM4B-204ENST00000588166 CLTCQ00610 1675 aaKnown RBP23.54■■□□□ 1.36
KDM4B-204ENST00000588166 A2MP01023 1474 aa23.52■■□□□ 1.36
KDM4B-204ENST00000588166 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
KDM4B-204ENST00000588166 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
KDM4B-204ENST00000588166 CFDP1Q9UEE9 299 aaPredicted RBP23.51■■□□□ 1.35
KDM4B-204ENST00000588166 IQSEC2Q5JU85 1478 aa23.5■■□□□ 1.35
KDM4B-204ENST00000588166 CCNB3Q8WWL7 1395 aa23.5■■□□□ 1.35
KDM4B-204ENST00000588166 MYO3AQ8NEV4 1616 aa23.49■■□□□ 1.35
KDM4B-204ENST00000588166 LOC105371045A0A1W2PR82 267 aa23.49■■□□□ 1.35
KDM4B-204ENST00000588166 PTPRKQ15262 1439 aa23.48■■□□□ 1.35
KDM4B-204ENST00000588166 TIAM1Q13009 1591 aa23.48■■□□□ 1.35
KDM4B-204ENST00000588166 ADGBQ8N7X0 1667 aa23.47■■□□□ 1.35
KDM4B-204ENST00000588166 MBD5Q9P267 1494 aa23.45■■□□□ 1.34
KDM4B-204ENST00000588166 MTUS2Q5JR59 1369 aa23.45■■□□□ 1.34
KDM4B-204ENST00000588166 CEP170BQ9Y4F5 1589 aaPredicted RBP23.44■■□□□ 1.34
KDM4B-204ENST00000588166 DISP3Q9P2K9 1392 aa23.44■■□□□ 1.34
KDM4B-204ENST00000588166 ILDR2Q71H61 639 aa23.44■■□□□ 1.34
KDM4B-204ENST00000588166 PLA2R1Q13018 1463 aa23.43■■□□□ 1.34
KDM4B-204ENST00000588166 ZNF644Q9H582 1327 aaPredicted RBP23.43■■□□□ 1.34
KDM4B-204ENST00000588166 TCOF1Q13428 1488 aaKnown RBP23.43■■□□□ 1.34
KDM4B-204ENST00000588166 NCKAP5LQ9HCH0 1330 aa23.42■■□□□ 1.34
KDM4B-204ENST00000588166 EHBP1L1Q8N3D4 1523 aa23.41■■□□□ 1.34
KDM4B-204ENST00000588166 GGT6Q6P531 493 aa23.39■■□□□ 1.33
KDM4B-204ENST00000588166 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
KDM4B-204ENST00000588166 RTEL1-TNFRSF6BF6WH68 1400 aa23.38■■□□□ 1.33
KDM4B-204ENST00000588166 SPATA31D1Q6ZQQ2 1576 aa23.38■■□□□ 1.33
KDM4B-204ENST00000588166 ZNF335Q9H4Z2 1342 aaPredicted RBP23.37■■□□□ 1.33
KDM4B-204ENST00000588166 PKD2Q13563 968 aa23.36■■□□□ 1.33
KDM4B-204ENST00000588166 DNMT1P26358 1616 aaKnown RBP23.33■■□□□ 1.33
KDM4B-204ENST00000588166 A2ML1A8K2U0 1454 aa23.33■■□□□ 1.33
KDM4B-204ENST00000588166 DHX29Q7Z478 1369 aaKnown RBP23.33■■□□□ 1.33
KDM4B-204ENST00000588166 SOCS7O14512 581 aa23.3■■□□□ 1.32
KDM4B-204ENST00000588166 CCDC141Q6ZP82 1450 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms